OT_ostta16g01960 cDNA ORF clone, Ostreococcus tauri

Gene
Clones
gRNAs

Summary

Gene Symbol	OT_ostta16g01960
Entrez Gene ID	9831097
Full Name	Sterol-sensing domain
Synonyms	Ot16g02080
Gene Type	protein-coding
Organism	Ostreococcus tauri

mRNA and Protein(s)

mRNA	Protein	Name
XM_003083610.1	XP_003083658.1	novel protein (ISS)
XM_003083610.2	XP_003083658.2	Sterol-sensing domain

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies.
Blanc-Mathieu R, Verhelst B, Derelle E, Rombauts S, Bouget FY, Carré I, Château A, Eyre-Walker A, Grimsley N, Moreau H, Piégu B, Rivals E, Schackwitz W, Van de Peer Y, Piganeau G
BMC genomics151103(2014 Dec)

Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features.
Derelle E, Ferraz C, Rombauts S, Rouzé P, Worden AZ, Robbens S, Partensky F, Degroeve S, Echeynié S, Cooke R, Saeys Y, Wuyts J, Jabbari K, Bowler C, Panaud O, Piégu B, Ball SG, Ral JP, Bouget FY, Piganeau G, De Baets B, Picard A, Delseny M, Demaille J, Van de Peer Y, Moreau H
Proceedings of the National Academy of Sciences of the United States of America103(31)11647-52(2006 Aug)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following OT_ostta16g01960 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the OT_ostta16g01960 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OOd72913	XM_003083610.2 Latest version!	Ostreococcus tauri Sterol-sensing domain (OT_ostta16g01960), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

OT_ostta16g01960 ( XM_003083610.2 ) cDNA ORF clone, Ostreococcus tauri -> XP_003083658.2 Ostreococcus tauri Sterol-sensing domain (OT_ostta16g01960), partial mRNA.

Price & Availability↑

CloneID	OOd72913
Clone ID Related Accession (Same CDS sequence)	XM_003083610.2
Accession Version	XM_003083610.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2682bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1509984000000
Organism	Ostreococcus tauri
Product	Sterol-sensing domain
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_014441). On Nov 8, 2017 this sequence version replaced XM_003083610.1. COMPLETENESS: incomplete on both ends.

ATGGATAACG TCCCGCCCAA GGTCATCGTC GCCGCGCGAC CGAGCGCGAG CGGGAACAGA 
GACGGCGAGA CGCTCGAGGA CGTCGCGTTC GGAAAAGTGC AATTGAATGA AAAGACGACA 
AGCGTCGAGC TCCCGTCGAC GTGCGGCGAT AAGCTCGCGA ACGGCGTGAA TGGTTTCTTC 
GGAAAGAAGT TCTACGCGCT CGGTAGGGCG AGCGCGTCGA GACCGTGGAC GATGATCGCG 
TGCACGGTGG TTTTGTGTGT GATTTTCAGC GGCGGGGTTG GGTACCCCGG GTTGAAGAAC 
GAGAACCGCG GCGATAGGCT GTGGGTGCCC ACGGACACGC CGGCGCAGGA CGATAAGACG 
TTCGTTGATA CGTATTACGG CGCGGAGACG CGATTCGCAC AGGCGATTTT GACCAAGACG 
GATGGGTCAA ACGTGCTGAC ACCGGAGGGA TTGACTGCGC TGCGGACCGT TGCGACAGGC 
GTGAGCGCGG TATCGATCAC GTGGGAAGGC GCGACGTACG GGTACAACGA TCACTGCTAT 
CGATTCGGGG CGAGCTGCTA CGCCAAGAGC GCTCTGGACG CGTTCTCGAA CGCCGCGGGG 
TATGCAAACC AGACGGCCAT CGACACCGTG ATGAAGGCGG ACCCTCTGAT GAATCCGACG 
GATAACTCCA AGATTCTTCT CTCGAGCGTG GCCGGGGGCG TGACGTACGA TTCCTCCGGG 
AACGTTCGGG CCAATGCACT GTCGCTCACG TACCTGTTCA AGAACAACGA CGTGTTGAAG 
AAGGGTGACT ACGTTGACGA AAAAGGCGAC GCGTTTGACT CCAAGGTTCT CGAAATCTTT 
GAGGCTTCTC CGCCGGCCGG TTTCAAGGTC TCTTATGTCA CCGCGCGCTC GTTCGGCGAT 
GAATTCGGGT CCACGATCAA CCGAGACCTC ACCAAGCTCC AGATCGCGCT CTTCCTCATC 
CTTGCATACG CTGCGCTGAC GCTCAGCAAA TGGGATCAAG GGTGCGTCGG CTCTCGCGTC 
GGCGTCACCT TGGCGGGAAT CATCTCCATT GGCATGGCGC TTGCGTCCGC GTACGGTCTG 
GGCTCTTATT TCGGTCTCTT CTTCTCACCG CTCATGAACG TCTTGCCATT CTTGCTCCTC 
GGCGTCGGCG TCGACGACAT GTTTGTCATC GTCAATGCGT ACGACAACGT CGAGGCCCGC 
GTTGATCCTG TCGAGCGTAT GGGTCGTACT CTGAGATACG CAGGTATGAG CGTGACCGTG 
ACCTCCATCA CGGACGTCAT CGCGTTCCTC ATCGGCTCTT CCACGTCCTT GCCCGCATTG 
AAAAACTTCT GCTACTATGC GGCGCTCGGC ATCTTCTTTG ATTACTTTTA CCAGGTCACC 
TTCTTCACCG CGTGCGTCGC TCTGGACGAG AGACGCAAGG CGAAGCGCCA AGGTGACGTT 
TTCTGCTGCT TGTCGTGCCC GGCCGAGGCG TGCTGCACCT GCTGCCAACC GCACAAGACG 
CAGAAGTCTA TGTTGCAGCG ACTCCTGGGC CAAACCATTG GTACGCGGTT GGGTAACCTG 
AAGGTCAAGA TTTTCGTCGT TACCTTCTTT TCTGCGATGA CGATCGGCGG TATCATCGGC 
GCGACCAAGA TTAAGGTCGA CGCCGACGTG AACAACTTCA TTCCGGACGA CTCGTACCTC 
AAGTTGTGGT TTGCGGACCG AGACGCCTAC TTCACCGTGT ACGGAGACGA CGTCGAACTG 
TACACAAAGT CCAGCCTCGA CCTGACCGAC CTGACCGCGG GCGATGCGGT TCTCCGTAAC 
GCCGTCACTA CGTTCAAGGC AAATCAGTAC GTCGTCACTG ATTCCGTGCG CTCGTGGGTG 
GACGAGTTCT ACACGTACAG AAACAGCTCA GGGCTCACAT CTCAGTCCTG GAGTGACTCA 
AACTACGTCA CCGCCCTCAA CTCCTGGCTC GCGGACACGA CCTCGAGCGG GGGATCAAAG 
TACAAAAATG ACGTCGTCTT CGATAGCACT TCCTCGCCGA CGAAGATCAT TACGTCTCGA 
GTGCATGGGA AACACATCAA GACGGACGAA TCAAACATCA ACGTCAAGGC GATGGACACG 
TTGCGCGAGC AAATCGCCTC CGTCAGCGGC AACAACGACA AAATCTTCCC GTTCGGCCGC 
GAGTGGTTGA ACTACGAGCA GTACAAGTCC ATCACGGGTG AGGCGATTCA AAACCTCTCC 
ATCACGATCG TGGCGTGCTT CGGCATCATC GCCCTTCTCG TTGTTGAGTT CAAAACCGTC 
ATCAGCGTCT CCTTGGCGCT TGTCATGATT TTCGTCAATA TCGTCGGTTA CATGCACTTC 
TGGGGGCTCA CTATCGATTC TGTCACCGTG ATCATGCTCG TTATTGCTCT CGGTCTCTCT 
GTCGATTACT CCGCGCACAT CGGACGCGCG TACCTCGAGA AGCTTGGCAC TCCCAACGAG 
CGCATCGTGC GCACGCTTGA GGACATGGGC GTCGCCGTCT GGAACGGCGC CATGTCTACC 
TTCATGGCCG TCCTCATCCT CGGATCTTCC GATTCATACG TCTTCCAAAC CTTCTTCAAG 
CAGCTTTTCC TGTGCATCAC GCTCGGTTTG GCGCACGGTT TGCTCTTCCT TCCGGTGTTG 
CTCTCACTGC TCGAGCCACG GCCGTATGCG GAGGCGCACT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_003083658.2
CDS	1..2682
Translation	MDNVPPKVIVAARPSASGNRDGETLEDVAFGKVQLNEKTTSVELPSTCGDKLANGVNGFFGKKFYALGRASASRPWTMIACTVVLCVIFSGGVGYPGLKNENRGDRLWVPTDTPAQDDKTFVDTYYGAETRFAQAILTKTDGSNVLTPEGLTALRTVATGVSAVSITWEGATYGYNDHCYRFGASCYAKSALDAFSNAAGYANQTAIDTVMKADPLMNPTDNSKILLSSVAGGVTYDSSGNVRANALSLTYLFKNNDVLKKGDYVDEKGDAFDSKVLEIFEASPPAGFKVSYVTARSFGDEFGSTINRDLTKLQIALFLILAYAALTLSKWDQGCVGSRVGVTLAGIISIGMALASAYGLGSYFGLFFSPLMNVLPFLLLGVGVDDMFVIVNAYDNVEARVDPVERMGRTLRYAGMSVTVTSITDVIAFLIGSSTSLPALKNFCYYAALGIFFDYFYQVTFFTACVALDERRKAKRQGDVFCCLSCPAEACCTCCQPHKTQKSMLQRLLGQTIGTRLGNLKVKIFVVTFFSAMTIGGIIGATKIKVDADVNNFIPDDSYLKLWFADRDAYFTVYGDDVELYTKSSLDLTDLTAGDAVLRNAVTTFKANQYVVTDSVRSWVDEFYTYRNSSGLTSQSWSDSNYVTALNSWLADTTSSGGSKYKNDVVFDSTSSPTKIITSRVHGKHIKTDESNINVKAMDTLREQIASVSGNNDKIFPFGREWLNYEQYKSITGEAIQNLSITIVACFGIIALLVVEFKTVISVSLALVMIFVNIVGYMHFWGLTIDSVTVIMLVIALGLSVDYSAHIGRAYLEKLGTPNERIVRTLEDMGVAVWNGAMSTFMAVLILGSSDSYVFQTFFKQLFLCITLGLAHGLLFLPVLLSLLEPRPYAEAH

Target ORF information:

RefSeq Version	XM_003083610.2
Organism	Ostreococcus tauri
Definition	Ostreococcus tauri Sterol-sensing domain (OT_ostta16g01960), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_003083610.2

ORF Insert Sequence:

ATGGATAACG TCCCGCCCAA GGTCATCGTC GCCGCGCGAC CGAGCGCGAG CGGGAACAGA 
GACGGCGAGA CGCTCGAGGA CGTCGCGTTC GGAAAAGTGC AATTGAATGA AAAGACGACA 
AGCGTCGAGC TCCCGTCGAC GTGCGGCGAT AAGCTCGCGA ACGGCGTGAA TGGTTTCTTC 
GGAAAGAAGT TCTACGCGCT CGGTAGGGCG AGCGCGTCGA GACCGTGGAC GATGATCGCG 
TGCACGGTGG TTTTGTGTGT GATTTTCAGC GGCGGGGTTG GGTACCCCGG GTTGAAGAAC 
GAGAACCGCG GCGATAGGCT GTGGGTGCCC ACGGACACGC CGGCGCAGGA CGATAAGACG 
TTCGTTGATA CGTATTACGG CGCGGAGACG CGATTCGCAC AGGCGATTTT GACCAAGACG 
GATGGGTCAA ACGTGCTGAC ACCGGAGGGA TTGACTGCGC TGCGGACCGT TGCGACAGGC 
GTGAGCGCGG TATCGATCAC GTGGGAAGGC GCGACGTACG GGTACAACGA TCACTGCTAT 
CGATTCGGGG CGAGCTGCTA CGCCAAGAGC GCTCTGGACG CGTTCTCGAA CGCCGCGGGG 
TATGCAAACC AGACGGCCAT CGACACCGTG ATGAAGGCGG ACCCTCTGAT GAATCCGACG 
GATAACTCCA AGATTCTTCT CTCGAGCGTG GCCGGGGGCG TGACGTACGA TTCCTCCGGG 
AACGTTCGGG CCAATGCACT GTCGCTCACG TACCTGTTCA AGAACAACGA CGTGTTGAAG 
AAGGGTGACT ACGTTGACGA AAAAGGCGAC GCGTTTGACT CCAAGGTTCT CGAAATCTTT 
GAGGCTTCTC CGCCGGCCGG TTTCAAGGTC TCTTATGTCA CCGCGCGCTC GTTCGGCGAT 
GAATTCGGGT CCACGATCAA CCGAGACCTC ACCAAGCTCC AGATCGCGCT CTTCCTCATC 
CTTGCATACG CTGCGCTGAC GCTCAGCAAA TGGGATCAAG GGTGCGTCGG CTCTCGCGTC 
GGCGTCACCT TGGCGGGAAT CATCTCCATT GGCATGGCGC TTGCGTCCGC GTACGGTCTG 
GGCTCTTATT TCGGTCTCTT CTTCTCACCG CTCATGAACG TCTTGCCATT CTTGCTCCTC 
GGCGTCGGCG TCGACGACAT GTTTGTCATC GTCAATGCGT ACGACAACGT CGAGGCCCGC 
GTTGATCCTG TCGAGCGTAT GGGTCGTACT CTGAGATACG CAGGTATGAG CGTGACCGTG 
ACCTCCATCA CGGACGTCAT CGCGTTCCTC ATCGGCTCTT CCACGTCCTT GCCCGCATTG 
AAAAACTTCT GCTACTATGC GGCGCTCGGC ATCTTCTTTG ATTACTTTTA CCAGGTCACC 
TTCTTCACCG CGTGCGTCGC TCTGGACGAG AGACGCAAGG CGAAGCGCCA AGGTGACGTT 
TTCTGCTGCT TGTCGTGCCC GGCCGAGGCG TGCTGCACCT GCTGCCAACC GCACAAGACG 
CAGAAGTCTA TGTTGCAGCG ACTCCTGGGC CAAACCATTG GTACGCGGTT GGGTAACCTG 
AAGGTCAAGA TTTTCGTCGT TACCTTCTTT TCTGCGATGA CGATCGGCGG TATCATCGGC 
GCGACCAAGA TTAAGGTCGA CGCCGACGTG AACAACTTCA TTCCGGACGA CTCGTACCTC 
AAGTTGTGGT TTGCGGACCG AGACGCCTAC TTCACCGTGT ACGGAGACGA CGTCGAACTG 
TACACAAAGT CCAGCCTCGA CCTGACCGAC CTGACCGCGG GCGATGCGGT TCTCCGTAAC 
GCCGTCACTA CGTTCAAGGC AAATCAGTAC GTCGTCACTG ATTCCGTGCG CTCGTGGGTG 
GACGAGTTCT ACACGTACAG AAACAGCTCA GGGCTCACAT CTCAGTCCTG GAGTGACTCA 
AACTACGTCA CCGCCCTCAA CTCCTGGCTC GCGGACACGA CCTCGAGCGG GGGATCAAAG 
TACAAAAATG ACGTCGTCTT CGATAGCACT TCCTCGCCGA CGAAGATCAT TACGTCTCGA 
GTGCATGGGA AACACATCAA GACGGACGAA TCAAACATCA ACGTCAAGGC GATGGACACG 
TTGCGCGAGC AAATCGCCTC CGTCAGCGGC AACAACGACA AAATCTTCCC GTTCGGCCGC 
GAGTGGTTGA ACTACGAGCA GTACAAGTCC ATCACGGGTG AGGCGATTCA AAACCTCTCC 
ATCACGATCG TGGCGTGCTT CGGCATCATC GCCCTTCTCG TTGTTGAGTT CAAAACCGTC 
ATCAGCGTCT CCTTGGCGCT TGTCATGATT TTCGTCAATA TCGTCGGTTA CATGCACTTC 
TGGGGGCTCA CTATCGATTC TGTCACCGTG ATCATGCTCG TTATTGCTCT CGGTCTCTCT 
GTCGATTACT CCGCGCACAT CGGACGCGCG TACCTCGAGA AGCTTGGCAC TCCCAACGAG 
CGCATCGTGC GCACGCTTGA GGACATGGGC GTCGCCGTCT GGAACGGCGC CATGTCTACC 
TTCATGGCCG TCCTCATCCT CGGATCTTCC GATTCATACG TCTTCCAAAC CTTCTTCAAG 
CAGCTTTTCC TGTGCATCAC GCTCGGTTTG GCGCACGGTT TGCTCTTCCT TCCGGTGTTG 
CTCTCACTGC TCGAGCCACG GCCGTATGCG GAGGCGCACT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies.
BMC genomics151103(2014 Dec)
Blanc-Mathieu R,Verhelst B,Derelle E,Rombauts S,Bouget FY,Carré I,Château A,Eyre-Walker A,Grimsley N,Moreau H,Piégu B,Rivals E,Schackwitz W,Van de Peer Y,Piganeau G

Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features.
Proceedings of the National Academy of Sciences of the United States of America103(31)11647-52(2006 Aug)
Derelle E,Ferraz C,Rombauts S,Rouzé P,Worden AZ,Robbens S,Partensky F,Degroeve S,Echeynié S,Cooke R,Saeys Y,Wuyts J,Jabbari K,Bowler C,Panaud O,Piégu B,Ball SG,Ral JP,Bouget FY,Piganeau G,De Baets B,Picard A,Delseny M,Demaille J,Van de Peer Y,Moreau H

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OT_ostta16g01960 cDNA ORF clone, Ostreococcus tauri

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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