LINJ_31_1270 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_31_1270
Entrez Gene ID	5071471
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001467383.1	XP_001467420.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_31_1270 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_31_1270 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc04865	XM_001467383.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_31_1270 ( XM_001467383.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001467420.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

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CloneID	OLc04865
Clone ID Related Accession (Same CDS sequence)	XM_001467383.1
Accession Version	XM_001467383.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3273bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009415). COMPLETENESS: incomplete on both ends.

ATGTCTTCGC CGTCGGCGAC AGACGCGCCT GCAAAGGCCC CCATAAAGCC GCACAGGGTT 
GTTGCCTTCT TCACCTCGGC GGACAGAAGT CGCTGCCTTG TCGGCGTGGT CGCCTCTACG 
CCGACCGTCG CCCAAAGTGA CGGCACCGTC GCCGTGCTTG TACAGCCCCG CCCGCTCATC 
CTGCTCGCTC CTCAGACACT GCAGGATGCG AGCAAGAGCG GCGGACTGGT TGCTGGGCAC 
CTTGTCGACG CTTCTGACCC CTCCGTTAGT GGTCTTCTCA CTGCATCTAT TTCGTCACCC 
AAGTGGGCAA ACAGCAGTGG CAGCGCTACG CTGCCTCTAA ACGCGGACGA TGTAGGCACA 
GTGATGACAG CCGAGGAGCT GCGAGAGATG CAAGAGCATC GAGACAGCCT GAAAGCAGAC 
CTCGGATCTA GCAGAGACCG AGTACGAGAA ATCGACGAGC TTATTCGTCA GCATACGCAG 
GAGAAAAACA GCAGTGCCAC ATTAGCAACC ACACCTAACC CACTGCGGGC ACCGTCTCCG 
CTAAAGGAGC ATCTCGATGC GGCTCGAAAG ACCGTCGATG ACGCAGCGAA AGCCGCCGAC 
GCTGCCGAGA AGGAGCTGCT GCTCGCACGC GCCGGTCTGC GAACAGTGAA GCCGTTCGCA 
TGGGCCGATC TACAGCGGCG CCACAGCGGC TCGTCTTCGC AGCCGTTGGT GAGTCTCATA 
GAAACTGCCG TGGCCCCGCT GCACGACCGC ACCTGTGCGT CGTTTGATGA CGCGATAGTG 
CAGGCAGTCT CTTTACCGAA GCGTCTGGCT GCCGTAAAGT CCATGAGTGT GACAGTCGAT 
GATACGCAGC GGGCACTGCG TTTTCTGAAG GCGTGGCCGA CCGTGGCGGC TGTCGCGAAG 
GAGCACAAGA CCGCCGCCGC CCTGTACCGG TGGGTCGACG CGCTCGCCAA GGCGACAGAG 
GCTCAACGGC GGCTGAAGGC GACGCAGCAA GCGCTCGCGG CAACACCATC GCAGAGCCCG 
GATGCTGCGT GGCAGTCAAA GGAGATGGCG CGGGCCCCTG AGGCCGCATC GCAGCCAACA 
AAGAAGCTCG ACTCCGTGGC AGAGGCGGCT CTGCGTAAGG AGCGCAAGGA TCAAATGGAG 
TACGTGCAGA TGGCGGAAGA AGAGCTGGCC GCTGTCGATG CCCTTATAGC CGAGGCTGAG 
GCACTGGCCA TCTCGTCTCC TCACGGTGCG CAGGACTCGC CAAAGGGAGC AAAGACTATT 
GTGCCGGCTC TGGCCGTGCC CACATCGTGG GTGGCCTGCG CCTTGCCAGA GGACGAGGCG 
CCGCGGATAG GAGTGTACGC ACACCAGCCG CGTGGCAAAC AAATAGAGTT TTCCAGCTCC 
GCAAGTCTGA TCCTATCAAC AGTGGCGAAG GAGCTCGTGC CGTCGGCGGT GGTGTCCACC 
GCTACGCCGC AGGATCGTAC AGTATCTGCG CTGGACCTTG CCGAGCCGCG CAAGGCATTG 
TCTGGTAGCG ACAACAACAG TGGCAGCAGC TACCACGGCA CCGGTGTGCA CCGGTCCACC 
AACAGCCCTC AGCTCAGCCC GCGAGCTGCG GCTGCGGCTT CTACGGGTGT GAGCAACGCG 
GCCCTTGTTC CAGTCACTGA AGTCACAGCC GCAAGGCAGC GCGCAGAGGA TGCGGAAGAA 
AAAACGCGAC TCCTCGAAGC CCGTCTCTCC GCCGCCCTTC AGCAGAACCC GAAAGAGGCG 
GAAGTGCAGC TGCTGCGCGA CGAACTGGAT GCGAAGCGCA CAGAGCTGCG TCGCGTCACG 
GAGGAGCGCG ATCGCCTCCT GCAGGAACGA TGCGATCGGA GCTCTCGGTA CGCGGCAGTC 
TCGCGGCGTG CTACGGCCGA CGGCGCACAA AACGACGGAG TATCTCAGGC TGCGTCTGGC 
CGGTATGCGC GGCGCTCGTC GACCCCGCGC GACACTGTCG ACCGCAGCGT CGTCGAAGAG 
CTCGAGGATC AGCTGACGGC AGCACACCAG CGCATCTCTG AGCTTCTTAT CGAGGCAAGC 
GAGTGGCGCC GCCGCTCGCC ATCACTAACA GCCGTCTCTA TAGCACCGAG AGCAGCCAAA 
AGTAGCCGCG TCGCCATCTC GCATGGCGAC TGCTCGCACG CGTCTGCGCT GCAGTCGCCG 
TCAACGGAGG AGATGGACAC CGCACCACAC TCCGCCAGCG ACACGCCGCG GCAGCGATCA 
CTGAGAGGTG CTGCTGTGTC GCCGTGCCGA ACTTCGTCGT CGCCAATGAT AACGCAGGAA 
ATGTATGATG ACCTCCAAGC CCGCCTGTGC GCCGTCTCGG ACGAGCTGGA AACTCAGCGG 
CAAGGGACAC GCCACCTGGA GGAACAGCTC AACGACGCCC TGCACCGGCG AAGTGAAGCA 
GAACACATGG TACTGGCGCA GAAGCACGAA CTCGAAGAAG TGTGGGAGAG GCTTGAGGCA 
GCGGAGGCCC GCGCTGAGGA GCAAGAGCTG CTTACCCAGC AGCGTCTCCT CCTCACTCAT 
ACGCAGCTCT TTCCTTCACA ATCGCAGCTG CCGCAACTGA ACGTATCTAC ACCGCTGCCA 
TCCGTGTCCC CCATAGTCAA CTCCAATCTT TCCCAAACCC TGCAGCCTAC TGTAGCATCT 
ACGGGCGCGC CGTTACAACA CGCGCAACAC ACGCTCAGCG TGCAAGACGT CTTTGGCGGC 
GACTCAGCGC CAGGTGCCGC CGATGCAGAG GTGAGGTCTC AGACGAACGA GGATGCAATG 
ACGATTGCCA CCAACGCGAA CACTGCCTAC GGCAGCGCGT CTCGACTGTC GGCGGACGTG 
TACCCGCACA GCCCGGGGAC CAGTGGCTTC CCAAGCTTTG GGGGTGGCGG CGGTGTAGCG 
ACTTCTGCCG CGGCAGCCAA TGCGGCGGAA CGCTCCATTG TCAGCCAGTA CAGCCGCGCT 
CCTTCGGCTC TCCAATCACG GCCGGTGGAG CAGCTGAGCA CGATTGAGCT ACGGCACGAG 
GTACACCGGC TCCGTGAAGA GGTGGAGCGG TGTCAGTCGG GGGAGCTGCG AATGGTGATG 
GAGCTGCAGA CGCTGCGCGA GAAGCAAAAA GCAGAGCGCA AACGCCGCCG TGACGCACGC 
GCCGCCCGCA TTCAAATGCT TGCGCGGATG CAGGGGAACA TAGCCGACGT CATCGAGAAG 
TCCACGAAGG AGCTGGAGGC GATCCCGGCG CTGCTCGAGC GCAGTCGTTC GGAAGCAGAG 
GCCCTCATGG CAAGACGTCG GATGGGTGGG TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001467420.1
CDS	1..3273
Translation	MSSPSATDAPAKAPIKPHRVVAFFTSADRSRCLVGVVASTPTVAQSDGTVAVLVQPRPLILLAPQTLQDASKSGGLVAGHLVDASDPSVSGLLTASISSPKWANSSGSATLPLNADDVGTVMTAEELREMQEHRDSLKADLGSSRDRVREIDELIRQHTQEKNSSATLATTPNPLRAPSPLKEHLDAARKTVDDAAKAADAAEKELLLARAGLRTVKPFAWADLQRRHSGSSSQPLVSLIETAVAPLHDRTCASFDDAIVQAVSLPKRLAAVKSMSVTVDDTQRALRFLKAWPTVAAVAKEHKTAAALYRWVDALAKATEAQRRLKATQQALAATPSQSPDAAWQSKEMARAPEAASQPTKKLDSVAEAALRKERKDQMEYVQMAEEELAAVDALIAEAEALAISSPHGAQDSPKGAKTIVPALAVPTSWVACALPEDEAPRIGVYAHQPRGKQIEFSSSASLILSTVAKELVPSAVVSTATPQDRTVSALDLAEPRKALSGSDNNSGSSYHGTGVHRSTNSPQLSPRAAAAASTGVSNAALVPVTEVTAARQRAEDAEEKTRLLEARLSAALQQNPKEAEVQLLRDELDAKRTELRRVTEERDRLLQERCDRSSRYAAVSRRATADGAQNDGVSQAASGRYARRSSTPRDTVDRSVVEELEDQLTAAHQRISELLIEASEWRRRSPSLTAVSIAPRAAKSSRVAISHGDCSHASALQSPSTEEMDTAPHSASDTPRQRSLRGAAVSPCRTSSSPMITQEMYDDLQARLCAVSDELETQRQGTRHLEEQLNDALHRRSEAEHMVLAQKHELEEVWERLEAAEARAEEQELLTQQRLLLTHTQLFPSQSQLPQLNVSTPLPSVSPIVNSNLSQTLQPTVASTGAPLQHAQHTLSVQDVFGGDSAPGAADAEVRSQTNEDAMTIATNANTAYGSASRLSADVYPHSPGTSGFPSFGGGGGVATSAAAANAAERSIVSQYSRAPSALQSRPVEQLSTIELRHEVHRLREEVERCQSGELRMVMELQTLREKQKAERKRRRDARAARIQMLARMQGNIADVIEKSTKELEAIPALLERSRSEAEALMARRRMGG

Target ORF information:

RefSeq Version	XM_001467383.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001467383.1

ORF Insert Sequence:

ATGTCTTCGC CGTCGGCGAC AGACGCGCCT GCAAAGGCCC CCATAAAGCC GCACAGGGTT 
GTTGCCTTCT TCACCTCGGC GGACAGAAGT CGCTGCCTTG TCGGCGTGGT CGCCTCTACG 
CCGACCGTCG CCCAAAGTGA CGGCACCGTC GCCGTGCTTG TACAGCCCCG CCCGCTCATC 
CTGCTCGCTC CTCAGACACT GCAGGATGCG AGCAAGAGCG GCGGACTGGT TGCTGGGCAC 
CTTGTCGACG CTTCTGACCC CTCCGTTAGT GGTCTTCTCA CTGCATCTAT TTCGTCACCC 
AAGTGGGCAA ACAGCAGTGG CAGCGCTACG CTGCCTCTAA ACGCGGACGA TGTAGGCACA 
GTGATGACAG CCGAGGAGCT GCGAGAGATG CAAGAGCATC GAGACAGCCT GAAAGCAGAC 
CTCGGATCTA GCAGAGACCG AGTACGAGAA ATCGACGAGC TTATTCGTCA GCATACGCAG 
GAGAAAAACA GCAGTGCCAC ATTAGCAACC ACACCTAACC CACTGCGGGC ACCGTCTCCG 
CTAAAGGAGC ATCTCGATGC GGCTCGAAAG ACCGTCGATG ACGCAGCGAA AGCCGCCGAC 
GCTGCCGAGA AGGAGCTGCT GCTCGCACGC GCCGGTCTGC GAACAGTGAA GCCGTTCGCA 
TGGGCCGATC TACAGCGGCG CCACAGCGGC TCGTCTTCGC AGCCGTTGGT GAGTCTCATA 
GAAACTGCCG TGGCCCCGCT GCACGACCGC ACCTGTGCGT CGTTTGATGA CGCGATAGTG 
CAGGCAGTCT CTTTACCGAA GCGTCTGGCT GCCGTAAAGT CCATGAGTGT GACAGTCGAT 
GATACGCAGC GGGCACTGCG TTTTCTGAAG GCGTGGCCGA CCGTGGCGGC TGTCGCGAAG 
GAGCACAAGA CCGCCGCCGC CCTGTACCGG TGGGTCGACG CGCTCGCCAA GGCGACAGAG 
GCTCAACGGC GGCTGAAGGC GACGCAGCAA GCGCTCGCGG CAACACCATC GCAGAGCCCG 
GATGCTGCGT GGCAGTCAAA GGAGATGGCG CGGGCCCCTG AGGCCGCATC GCAGCCAACA 
AAGAAGCTCG ACTCCGTGGC AGAGGCGGCT CTGCGTAAGG AGCGCAAGGA TCAAATGGAG 
TACGTGCAGA TGGCGGAAGA AGAGCTGGCC GCTGTCGATG CCCTTATAGC CGAGGCTGAG 
GCACTGGCCA TCTCGTCTCC TCACGGTGCG CAGGACTCGC CAAAGGGAGC AAAGACTATT 
GTGCCGGCTC TGGCCGTGCC CACATCGTGG GTGGCCTGCG CCTTGCCAGA GGACGAGGCG 
CCGCGGATAG GAGTGTACGC ACACCAGCCG CGTGGCAAAC AAATAGAGTT TTCCAGCTCC 
GCAAGTCTGA TCCTATCAAC AGTGGCGAAG GAGCTCGTGC CGTCGGCGGT GGTGTCCACC 
GCTACGCCGC AGGATCGTAC AGTATCTGCG CTGGACCTTG CCGAGCCGCG CAAGGCATTG 
TCTGGTAGCG ACAACAACAG TGGCAGCAGC TACCACGGCA CCGGTGTGCA CCGGTCCACC 
AACAGCCCTC AGCTCAGCCC GCGAGCTGCG GCTGCGGCTT CTACGGGTGT GAGCAACGCG 
GCCCTTGTTC CAGTCACTGA AGTCACAGCC GCAAGGCAGC GCGCAGAGGA TGCGGAAGAA 
AAAACGCGAC TCCTCGAAGC CCGTCTCTCC GCCGCCCTTC AGCAGAACCC GAAAGAGGCG 
GAAGTGCAGC TGCTGCGCGA CGAACTGGAT GCGAAGCGCA CAGAGCTGCG TCGCGTCACG 
GAGGAGCGCG ATCGCCTCCT GCAGGAACGA TGCGATCGGA GCTCTCGGTA CGCGGCAGTC 
TCGCGGCGTG CTACGGCCGA CGGCGCACAA AACGACGGAG TATCTCAGGC TGCGTCTGGC 
CGGTATGCGC GGCGCTCGTC GACCCCGCGC GACACTGTCG ACCGCAGCGT CGTCGAAGAG 
CTCGAGGATC AGCTGACGGC AGCACACCAG CGCATCTCTG AGCTTCTTAT CGAGGCAAGC 
GAGTGGCGCC GCCGCTCGCC ATCACTAACA GCCGTCTCTA TAGCACCGAG AGCAGCCAAA 
AGTAGCCGCG TCGCCATCTC GCATGGCGAC TGCTCGCACG CGTCTGCGCT GCAGTCGCCG 
TCAACGGAGG AGATGGACAC CGCACCACAC TCCGCCAGCG ACACGCCGCG GCAGCGATCA 
CTGAGAGGTG CTGCTGTGTC GCCGTGCCGA ACTTCGTCGT CGCCAATGAT AACGCAGGAA 
ATGTATGATG ACCTCCAAGC CCGCCTGTGC GCCGTCTCGG ACGAGCTGGA AACTCAGCGG 
CAAGGGACAC GCCACCTGGA GGAACAGCTC AACGACGCCC TGCACCGGCG AAGTGAAGCA 
GAACACATGG TACTGGCGCA GAAGCACGAA CTCGAAGAAG TGTGGGAGAG GCTTGAGGCA 
GCGGAGGCCC GCGCTGAGGA GCAAGAGCTG CTTACCCAGC AGCGTCTCCT CCTCACTCAT 
ACGCAGCTCT TTCCTTCACA ATCGCAGCTG CCGCAACTGA ACGTATCTAC ACCGCTGCCA 
TCCGTGTCCC CCATAGTCAA CTCCAATCTT TCCCAAACCC TGCAGCCTAC TGTAGCATCT 
ACGGGCGCGC CGTTACAACA CGCGCAACAC ACGCTCAGCG TGCAAGACGT CTTTGGCGGC 
GACTCAGCGC CAGGTGCCGC CGATGCAGAG GTGAGGTCTC AGACGAACGA GGATGCAATG 
ACGATTGCCA CCAACGCGAA CACTGCCTAC GGCAGCGCGT CTCGACTGTC GGCGGACGTG 
TACCCGCACA GCCCGGGGAC CAGTGGCTTC CCAAGCTTTG GGGGTGGCGG CGGTGTAGCG 
ACTTCTGCCG CGGCAGCCAA TGCGGCGGAA CGCTCCATTG TCAGCCAGTA CAGCCGCGCT 
CCTTCGGCTC TCCAATCACG GCCGGTGGAG CAGCTGAGCA CGATTGAGCT ACGGCACGAG 
GTACACCGGC TCCGTGAAGA GGTGGAGCGG TGTCAGTCGG GGGAGCTGCG AATGGTGATG 
GAGCTGCAGA CGCTGCGCGA GAAGCAAAAA GCAGAGCGCA AACGCCGCCG TGACGCACGC 
GCCGCCCGCA TTCAAATGCT TGCGCGGATG CAGGGGAACA TAGCCGACGT CATCGAGAAG 
TCCACGAAGG AGCTGGAGGC GATCCCGGCG CTGCTCGAGC GCAGTCGTTC GGAAGCAGAG 
GCCCTCATGG CAAGACGTCG GATGGGTGGG TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_31_1270 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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