LINJ_25_0840 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_25_0840
Entrez Gene ID	5069548
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001466077.1	XP_001466114.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_25_0840 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_25_0840 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc03183	XM_001466077.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_25_0840 ( XM_001466077.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001466114.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc03183
Clone ID Related Accession (Same CDS sequence)	XM_001466077.1
Accession Version	XM_001466077.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3066bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009409). COMPLETENESS: incomplete on both ends.

ATGTCCACTG CCGTCTTCGA ACTGTTCAGT AAGCTCGCCG GGGTGGCCAG TGCCGGCCAG 
CAAGGGACCC CATCTGCCCT CGAGATGGCA CCACCGCAGA TGCTCCTGCC AACAGACGAG 
GAGTGTGTGC TGTACGGGCA GAAGAAGCCG ATTGTGTTCT TCTACGAGCC ACGGGGAGCG 
CAGCAGCTCG CCAGCGGCGC GGCGGATGGT AACTCCGGAC CCGGTGCCGG CGCGGCTCTC 
ACCTCAAGCA GCCGCACAAG TTTATTGCAA GAGTGGCCAG CAGAGTTGTC TGCAGCGCAG 
CTGGTGTCCC CGGGGACGAC GGTGCATGCA CTCCGCGTGA CGAACGCCGA AGATGACCTC 
CACAAGACGC TGTCTACACA GGAGGTGTGG GCTGACTGGC CGCAGACTAT CCGCGGCTGG 
CAGCTCTGCC CCATGAGTCA TCTGTGTGCT ATGGTGCGCA CCAACGGTGC AGCTCCGCAT 
TTGTATTTGT TGGCCTCGCG CTACGAACTG GTGGGCACCT CCGCTGTGTA CGAGCGATAT 
CTGCTGCTGA CGCCGCCGTC GAAAGACAGC GGTCGTGGCG CAGCATCTAA TGTTTTGGCG 
CGTGCGACGA CGGCAGCGGA CTCGGCGTCT ATCAGTGTCA CCGAGTTGCG CACCCTGCGG 
CGTATCGCCT GCCTCTGCCG ATGTTTCTGC AGTAGCGGTG CGGAGGCGCA GCCACGCACA 
GCGCGGTCGC GCGGTGTCGG CAGCGATACG CTCGTGCCGC CGCCACCGCT GGCGGACTAC 
GTTCTCCACT TGGTGCCGAC TTCCCTTCAG TACACCTTCT GCTTCGCCGC GACGGCACTG 
CTGGGCGCGG CAGACGAGGA ACGCTGCCAG TCGTGGGCCA TGACAGCGAC GGCGTTGAGT 
CGACTAAAGT TCAGTTCACG TTACCAGTCT TGCTCGACGA CCGAGGCAGC CAACACCTCC 
GGCGCACTCT CCGATGGCGG GCACACGACA TACTTGGAGT CCGCGACGCA ATCGCGTGAC 
CGCAGCACCT CTGCGGTGCG CGTGGTGGAG GGTGGCGGCG GCGGCATGAC GAGCGCCTCT 
GGCGCTGGCC TCAGTGAGGA CCCCCGGTCA GCGCCGTCGA CGCCGGCGCG GCCGCTGCTC 
GCGATGGGCC GCATGGATGG GCAGCGTGGT GGCTCGCTCT CTGCAGCGCG TCACCACGAA 
GACATGCACC AAAATGGCGA AAGCATACTG GAGGAGCGCC TTCCGCCATC GCAGCGGTGG 
CGAGCCATGG CGCTCCGTCG ACTTCTCGAC ACGTCCTTCT ACAATGAGCA GGTGCCCTCC 
GGGTGGCGGC GCTGGCGCTA CGCGTCGAGT GGCATTCTGT GCCGCCCCCT CGTGGTCGAC 
TCTCTTGACG GCATCGTCCG CTACATCCAC GGCAGTCGTC TCGCCTTCTA CACGGCAGTC 
GCATTTCTCG ATCGGTTCAT CGCCGTCACG GTGGATCCCC TCGCCAACTT CTTCGCCTAC 
AAACGCCAGC TCCAGCGGGG TCGCTCGCGG CAGGAGATGG ACTGCCGAAT GCTGGCGATG 
TACGGCACGA GGCCCACCAG CCCGCCCATC GCCGCCGAGC TCCCTGCAGA GCAGCTGTAC 
GACAGCGGTC TCGACGGTGG CGTGCAGGCG CGCGAAATCT GCAGCTTTCT GACGCAGGTC 
ATCGTGGTGT GCATCATGCT CGGTAGCAAG ACGGTCGATC TCTACCCCCC GCGCATTCGC 
AGCTTGATGG GCTGCGTCGA GGACACGGCC CCCATCAGCG AGGAGGACTT CGTGATCCTC 
GAGTTCCACG TTCTGCTCAC GCTTGGCTTT CCTGTTCACC CGGTCACTCT CTTCGAGGCT 
GTCGGCGCAC TGCTCGCCTT CTCAACCAGT GATGCCCTGT ACGGCACTCT CACAGCGTCC 
CACACGACGC GACGGCTGCT GGAGGAGCAC CAAGACCGCG GCCACCTCGT CGACGACGTT 
GACCGGCTCA TGCAAGAAGA GGCCGAGGAG GAAGAGGCAG CAGCGGTGGC AGGAAGCGCG 
CAGCCGCACC CGGCCTTACG CGCCGCCGCG CTGACGCCGG CAGACCGGCG CGCCATCAAT 
GACTGGCTGC GGTTGCGCCT CTTTACGTGT TTCATCTGCG ACGAGGTCAT TCGCGCCAAC 
GCTGGTGGCT CTGCCGCATC GTCGTCCGCG TCTGCCTCGT CAGCTAGCGA CAGCACCCCG 
CGCCACGGCG GCGGCGTCAA CAGCAGGATG GCCGCCGAAG AAGAAAGCAA GTTGCCGGAC 
GGAGGCTTCA GCGTTCTCCA GCTCTCGCCC GTGCTCGTGG CCGCCGCGGC GCTCGTGATA 
GCAGCCGAGC AGCTGCGCAT GCCGCTTCCT GCACCGATGA TGCGCCTTGT GCCAGTCCCT 
ATGCAAGCAC TGCTGCGCGA AGCCCCGGTC GACGGCAGCA GCGACGTTGG TCGTAGCAAT 
GGTGGTAGCA GTTCTGGGCG TGTCATGGCC GCGTTGCACC GAAGAGGCCA GAACACGAGC 
ACGTGTGACG TGGCGATAGA GGAGTCGAAC GTGCTGGGAC GTGGCGCCGG CGCTGATGCA 
AGACACAACG AGGCGTCGAC CGGGTTGCGC CTCACGGCGG GCGCCACGGA TGACCACTAC 
AAAGTATTGA TGGAGCTTTC ACTACTTCTG GAGCATGAGC TGAGTCGACT CTCTGACGAC 
AGCGGTCTGC AGGGGCCGCC GCCTCTGGCG AGTGTGCCGG CCGCTGGTGC CACGCCCACT 
TCGACAAATC TGGAAGTAGA AGAAGAGCAG ATCGGCGCTG GCAGCTGCGG CGCGGCAGCA 
GTGGCCGGGC CATCGCTGTG TCCCACCCAT CCCTACACGG GTGAGCTGTC ACGTGGAGGG 
GCAGCTCGAC GAGGAGCGCC TTTAACCTCT GCTGCGTCGC CACGTGTGCG TCCGGCGAGC 
GCGCGCGCGA TTGACATGTT CGGTCGCATC ATTGCTCAGG CGAAGGCGAT ACACCACAGG 
AGCCGCGAGA GCTGCCCGCC GGTGCTGCTG CATCGCTATC AGCCTCTCTT CCGGGATTGC 
GTGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001466114.1
CDS	1..3066
Translation	MSTAVFELFSKLAGVASAGQQGTPSALEMAPPQMLLPTDEECVLYGQKKPIVFFYEPRGAQQLASGAADGNSGPGAGAALTSSSRTSLLQEWPAELSAAQLVSPGTTVHALRVTNAEDDLHKTLSTQEVWADWPQTIRGWQLCPMSHLCAMVRTNGAAPHLYLLASRYELVGTSAVYERYLLLTPPSKDSGRGAASNVLARATTAADSASISVTELRTLRRIACLCRCFCSSGAEAQPRTARSRGVGSDTLVPPPPLADYVLHLVPTSLQYTFCFAATALLGAADEERCQSWAMTATALSRLKFSSRYQSCSTTEAANTSGALSDGGHTTYLESATQSRDRSTSAVRVVEGGGGGMTSASGAGLSEDPRSAPSTPARPLLAMGRMDGQRGGSLSAARHHEDMHQNGESILEERLPPSQRWRAMALRRLLDTSFYNEQVPSGWRRWRYASSGILCRPLVVDSLDGIVRYIHGSRLAFYTAVAFLDRFIAVTVDPLANFFAYKRQLQRGRSRQEMDCRMLAMYGTRPTSPPIAAELPAEQLYDSGLDGGVQAREICSFLTQVIVVCIMLGSKTVDLYPPRIRSLMGCVEDTAPISEEDFVILEFHVLLTLGFPVHPVTLFEAVGALLAFSTSDALYGTLTASHTTRRLLEEHQDRGHLVDDVDRLMQEEAEEEEAAAVAGSAQPHPALRAAALTPADRRAINDWLRLRLFTCFICDEVIRANAGGSAASSSASASSASDSTPRHGGGVNSRMAAEEESKLPDGGFSVLQLSPVLVAAAALVIAAEQLRMPLPAPMMRLVPVPMQALLREAPVDGSSDVGRSNGGSSSGRVMAALHRRGQNTSTCDVAIEESNVLGRGAGADARHNEASTGLRLTAGATDDHYKVLMELSLLLEHELSRLSDDSGLQGPPPLASVPAAGATPTSTNLEVEEEQIGAGSCGAAAVAGPSLCPTHPYTGELSRGGAARRGAPLTSAASPRVRPASARAIDMFGRIIAQAKAIHHRSRESCPPVLLHRYQPLFRDCV

Target ORF information:

RefSeq Version	XM_001466077.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001466077.1

ORF Insert Sequence:

ATGTCCACTG CCGTCTTCGA ACTGTTCAGT AAGCTCGCCG GGGTGGCCAG TGCCGGCCAG 
CAAGGGACCC CATCTGCCCT CGAGATGGCA CCACCGCAGA TGCTCCTGCC AACAGACGAG 
GAGTGTGTGC TGTACGGGCA GAAGAAGCCG ATTGTGTTCT TCTACGAGCC ACGGGGAGCG 
CAGCAGCTCG CCAGCGGCGC GGCGGATGGT AACTCCGGAC CCGGTGCCGG CGCGGCTCTC 
ACCTCAAGCA GCCGCACAAG TTTATTGCAA GAGTGGCCAG CAGAGTTGTC TGCAGCGCAG 
CTGGTGTCCC CGGGGACGAC GGTGCATGCA CTCCGCGTGA CGAACGCCGA AGATGACCTC 
CACAAGACGC TGTCTACACA GGAGGTGTGG GCTGACTGGC CGCAGACTAT CCGCGGCTGG 
CAGCTCTGCC CCATGAGTCA TCTGTGTGCT ATGGTGCGCA CCAACGGTGC AGCTCCGCAT 
TTGTATTTGT TGGCCTCGCG CTACGAACTG GTGGGCACCT CCGCTGTGTA CGAGCGATAT 
CTGCTGCTGA CGCCGCCGTC GAAAGACAGC GGTCGTGGCG CAGCATCTAA TGTTTTGGCG 
CGTGCGACGA CGGCAGCGGA CTCGGCGTCT ATCAGTGTCA CCGAGTTGCG CACCCTGCGG 
CGTATCGCCT GCCTCTGCCG ATGTTTCTGC AGTAGCGGTG CGGAGGCGCA GCCACGCACA 
GCGCGGTCGC GCGGTGTCGG CAGCGATACG CTCGTGCCGC CGCCACCGCT GGCGGACTAC 
GTTCTCCACT TGGTGCCGAC TTCCCTTCAG TACACCTTCT GCTTCGCCGC GACGGCACTG 
CTGGGCGCGG CAGACGAGGA ACGCTGCCAG TCGTGGGCCA TGACAGCGAC GGCGTTGAGT 
CGACTAAAGT TCAGTTCACG TTACCAGTCT TGCTCGACGA CCGAGGCAGC CAACACCTCC 
GGCGCACTCT CCGATGGCGG GCACACGACA TACTTGGAGT CCGCGACGCA ATCGCGTGAC 
CGCAGCACCT CTGCGGTGCG CGTGGTGGAG GGTGGCGGCG GCGGCATGAC GAGCGCCTCT 
GGCGCTGGCC TCAGTGAGGA CCCCCGGTCA GCGCCGTCGA CGCCGGCGCG GCCGCTGCTC 
GCGATGGGCC GCATGGATGG GCAGCGTGGT GGCTCGCTCT CTGCAGCGCG TCACCACGAA 
GACATGCACC AAAATGGCGA AAGCATACTG GAGGAGCGCC TTCCGCCATC GCAGCGGTGG 
CGAGCCATGG CGCTCCGTCG ACTTCTCGAC ACGTCCTTCT ACAATGAGCA GGTGCCCTCC 
GGGTGGCGGC GCTGGCGCTA CGCGTCGAGT GGCATTCTGT GCCGCCCCCT CGTGGTCGAC 
TCTCTTGACG GCATCGTCCG CTACATCCAC GGCAGTCGTC TCGCCTTCTA CACGGCAGTC 
GCATTTCTCG ATCGGTTCAT CGCCGTCACG GTGGATCCCC TCGCCAACTT CTTCGCCTAC 
AAACGCCAGC TCCAGCGGGG TCGCTCGCGG CAGGAGATGG ACTGCCGAAT GCTGGCGATG 
TACGGCACGA GGCCCACCAG CCCGCCCATC GCCGCCGAGC TCCCTGCAGA GCAGCTGTAC 
GACAGCGGTC TCGACGGTGG CGTGCAGGCG CGCGAAATCT GCAGCTTTCT GACGCAGGTC 
ATCGTGGTGT GCATCATGCT CGGTAGCAAG ACGGTCGATC TCTACCCCCC GCGCATTCGC 
AGCTTGATGG GCTGCGTCGA GGACACGGCC CCCATCAGCG AGGAGGACTT CGTGATCCTC 
GAGTTCCACG TTCTGCTCAC GCTTGGCTTT CCTGTTCACC CGGTCACTCT CTTCGAGGCT 
GTCGGCGCAC TGCTCGCCTT CTCAACCAGT GATGCCCTGT ACGGCACTCT CACAGCGTCC 
CACACGACGC GACGGCTGCT GGAGGAGCAC CAAGACCGCG GCCACCTCGT CGACGACGTT 
GACCGGCTCA TGCAAGAAGA GGCCGAGGAG GAAGAGGCAG CAGCGGTGGC AGGAAGCGCG 
CAGCCGCACC CGGCCTTACG CGCCGCCGCG CTGACGCCGG CAGACCGGCG CGCCATCAAT 
GACTGGCTGC GGTTGCGCCT CTTTACGTGT TTCATCTGCG ACGAGGTCAT TCGCGCCAAC 
GCTGGTGGCT CTGCCGCATC GTCGTCCGCG TCTGCCTCGT CAGCTAGCGA CAGCACCCCG 
CGCCACGGCG GCGGCGTCAA CAGCAGGATG GCCGCCGAAG AAGAAAGCAA GTTGCCGGAC 
GGAGGCTTCA GCGTTCTCCA GCTCTCGCCC GTGCTCGTGG CCGCCGCGGC GCTCGTGATA 
GCAGCCGAGC AGCTGCGCAT GCCGCTTCCT GCACCGATGA TGCGCCTTGT GCCAGTCCCT 
ATGCAAGCAC TGCTGCGCGA AGCCCCGGTC GACGGCAGCA GCGACGTTGG TCGTAGCAAT 
GGTGGTAGCA GTTCTGGGCG TGTCATGGCC GCGTTGCACC GAAGAGGCCA GAACACGAGC 
ACGTGTGACG TGGCGATAGA GGAGTCGAAC GTGCTGGGAC GTGGCGCCGG CGCTGATGCA 
AGACACAACG AGGCGTCGAC CGGGTTGCGC CTCACGGCGG GCGCCACGGA TGACCACTAC 
AAAGTATTGA TGGAGCTTTC ACTACTTCTG GAGCATGAGC TGAGTCGACT CTCTGACGAC 
AGCGGTCTGC AGGGGCCGCC GCCTCTGGCG AGTGTGCCGG CCGCTGGTGC CACGCCCACT 
TCGACAAATC TGGAAGTAGA AGAAGAGCAG ATCGGCGCTG GCAGCTGCGG CGCGGCAGCA 
GTGGCCGGGC CATCGCTGTG TCCCACCCAT CCCTACACGG GTGAGCTGTC ACGTGGAGGG 
GCAGCTCGAC GAGGAGCGCC TTTAACCTCT GCTGCGTCGC CACGTGTGCG TCCGGCGAGC 
GCGCGCGCGA TTGACATGTT CGGTCGCATC ATTGCTCAGG CGAAGGCGAT ACACCACAGG 
AGCCGCGAGA GCTGCCCGCC GGTGCTGCTG CATCGCTATC AGCCTCTCTT CCGGGATTGC 
GTGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_25_0840 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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