Rpt5 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Rpt5
Entrez Gene ID	42805
Full Name	Regulatory particle triple-A ATPase 5
Synonyms	BcDNA.GH12068,BcDNA:GH12068,CG10370,DmTBP-1,Dm_Rpt5a,Dm_Rpt5b,Dmel\CG10370,Pros26S,Pros26S-RS6A,S6',TBP-1,Tbp-1,Tbp1,anon-WO0153538.10,anon-WO0153538.8,anon-WO0153538.9,dRpt5,l(3)04210,p50,tbp-1
General protein information	Preferred Names Regulatory particle triple-A ATPase 5 Names CG10370 gene product from transcript CG10370-RA CG10370-PA Rpt5-PA Tat-binding protein-1 proteasome 26S regulatory subunit 6A regulatory particle triple-A ATPase 5
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 95B1-95B1

mRNA and Protein(s)

mRNA	Protein	Name
NM_079740.4	NP_524464.1	regulatory particle triple-A ATPase 5

Pathways from BioSystems

Homologies

Oryza sativa (rice)	Os06g0173100	NP_001056944.1
Canis lupus familiaris (dog)	PSMC3	XP_533187.3
Bos taurus (cattle)	PSMC3	NP_001179113.2
Mus musculus (house mouse)	Psmc3	NP_032974.2
Caenorhabditis elegans (roundworm)	rpt-5	NP_491672.1
Eremothecium gossypii	AGOS_AER254W	NP_985111.2
Homo sapiens (human)	PSMC3	NP_002795.2
Arabidopsis thaliana (thale cress)	RPT5A	NP_187204.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP000616	XP_310465.3
Oryza sativa (rice)	Os02g0803700	NP_001048428.1
Saccharomyces cerevisiae (baker's yeast)	RPT5	NP_014760.3
Magnaporthe oryzae (rice blast fungus)	MGG_12925	XP_003712713.1
Pan troglodytes (chimpanzee)	PSMC3	XP_508413.3
Macaca mulatta (Rhesus monkey)	PSMC3	XP_001106497.1
Rattus norvegicus (Norway rat)	Psmc3	NP_113783.1
Gallus gallus (chicken)	PSMC3	NP_001026361.1
Drosophila melanogaster (fruit fly)	Tbp-1	NP_524464.1
Kluyveromyces lactis	KLLA0E21209g	XP_454909.1
Danio rerio (zebrafish)	psmc3	NP_001002064.1
Arabidopsis thaliana (thale cress)	RPT5B	NP_172384.1
Xenopus tropicalis (tropical clawed frog)	psmc3	NP_001006786.1
Neurospora crassa	NCU04414	XP_957491.2
Schizosaccharomyces pombe (fission yeast)	rpt5	XP_001713083.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Rpt5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Rpt5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa05826	NM_079740.4 Latest version!	Drosophila melanogaster regulatory particle triple-A ATPase 5 (Rpt5), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Rpt5 ( NM_079740.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_524464.1 Drosophila melanogaster regulatory particle triple-A ATPase 5 (Rpt5), mRNA.

Price & Availability↑

CloneID	OFa05826
Clone ID Related Accession (Same CDS sequence)	NM_079740.4
Accession Version	NM_079740.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1287bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1556035200000
Organism	Drosophila melanogaster(fruit fly)
Product	regulatory particle triple-A ATPase 5
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jan 16, 2013 this sequence version replaced NM_079740.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCTCAGA CTCTGGAGGA TAAGTCAATC TGGGAGGACG GGGAGGAGTC CCTGGGCGAG 
GAGGTGATGC GTATGTCCAC CGATGAAATT GTGAGCAGGA CTCGCCTGAT GGACAACGAG 
ATCAAGATCA TGAAGAGCGA AGTGATACGC ATAACGCACG AGATTCAGGC GCAAAATGAG 
AAGATCAAGG ACAACACCGA AAAGATCAAG GTCAACAAGA CACTGCCCTA CCTGGTGTCC 
AATGTAATAG AGCTGCTGGA TGTGGATCCA CAGGAGGAGG AGGACGACGG CTCCGTCACC 
GTTCTGGACA ACCAGCGAAA GGGCAAGTGC GCCGTCATCA AAACATCCAC TCGACAGGCG 
TATTTCCTGC CCGTCATCGG CCTGGTTGAT GCCGAGAAAC TGAAGCCAGG TGATCTGGTC 
GGAGTCAACA AAGACTCCTA TTTGATCCTG GAAACCCTGC CGGCAGAGTA TGATGCCCGC 
GTAAAAGCCA TGGAAGTGGA CGAGCGACCT ACAGAGCAGT ACTCCGACAT TGGAGGTTTG 
GACAAGCAGA TACAGGAGCT CATCGAGGCA GTGGTGCTGC CCATGACGCA CAAGGAGAAG 
TTCAAAAACC TTGGCATTCA CCCACCCAAA GGTGTCCTTT TGTACGGCCC CCCTGGAACT 
GGCAAAACAT TGCTGGCCCG TGCCTGCGCC GCTCAGACAA AGTCCACCTT CCTCAAGCTG 
GCAGGTCCCC AGTTGGTGCA AATGTTCATC GGTGATGGTG CCAAGCTGGT GCGCGATGCC 
TTCGCCTTGG CCAAGGAGAA GGCGCCTGCC ATTATCTTCA TTGACGAGTT GGACGCCATT 
GGCACCAAGC GTTTCGATTC GGAGAAGGCC GGTGACCGTG AGGTCCAGCG AACTATGTTG 
GAGCTTCTTA ATCAGCTCGA TGGCTTCAGT TCCACTGCAG ATATTAAGGT GATTGCGGCC 
ACCAATCGCG TAGACATTCT GGATCCTGCT CTGCTGCGCT CTGGTCGTCT GGATCGTAAG 
ATCGAGTTCC CACATCCCAA CGAGGAAGCC CGTGCCCGTA TTATGCAGAT TCACTCGCGT 
AAAATGAACG TTAGCAATGA TGTGAATTTC GAGGAATTGT CCCGATCCAC GGATGACTTC 
AACGGCGCCC AGTGCAAAGC CGTCTGTGTG GAAGCTGGTA TGATCGCACT GCGTCGCTCC 
GCCAATTCGG TTACGCACGA AGACTTCATG GACGCCATCA TGGAAGTGCA GGCGAAGAAG 
AAGGCTAATC TTAACTACTA CGCTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_524464.1
CDS	139..1425
Translation	MAQTLEDKSIWEDGEESLGEEVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQNEKIKDNTEKIKVNKTLPYLVSNVIELLDVDPQEEEDDGSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEVQAKKKANLNYYA

Target ORF information:

RefSeq Version	NM_079740.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster regulatory particle triple-A ATPase 5 (Rpt5), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_079740.4

ORF Insert Sequence:

ATGGCTCAGA CTCTGGAGGA TAAGTCAATC TGGGAGGACG GGGAGGAGTC CCTGGGCGAG 
GAGGTGATGC GTATGTCCAC CGATGAAATT GTGAGCAGGA CTCGCCTGAT GGACAACGAG 
ATCAAGATCA TGAAGAGCGA AGTGATACGC ATAACGCACG AGATTCAGGC GCAAAATGAG 
AAGATCAAGG ACAACACCGA AAAGATCAAG GTCAACAAGA CACTGCCCTA CCTGGTGTCC 
AATGTAATAG AGCTGCTGGA TGTGGATCCA CAGGAGGAGG AGGACGACGG CTCCGTCACC 
GTTCTGGACA ACCAGCGAAA GGGCAAGTGC GCCGTCATCA AAACATCCAC TCGACAGGCG 
TATTTCCTGC CCGTCATCGG CCTGGTTGAT GCCGAGAAAC TGAAGCCAGG TGATCTGGTC 
GGAGTCAACA AAGACTCCTA TTTGATCCTG GAAACCCTGC CGGCAGAGTA TGATGCCCGC 
GTAAAAGCCA TGGAAGTGGA CGAGCGACCT ACAGAGCAGT ACTCCGACAT TGGAGGTTTG 
GACAAGCAGA TACAGGAGCT CATCGAGGCA GTGGTGCTGC CCATGACGCA CAAGGAGAAG 
TTCAAAAACC TTGGCATTCA CCCACCCAAA GGTGTCCTTT TGTACGGCCC CCCTGGAACT 
GGCAAAACAT TGCTGGCCCG TGCCTGCGCC GCTCAGACAA AGTCCACCTT CCTCAAGCTG 
GCAGGTCCCC AGTTGGTGCA AATGTTCATC GGTGATGGTG CCAAGCTGGT GCGCGATGCC 
TTCGCCTTGG CCAAGGAGAA GGCGCCTGCC ATTATCTTCA TTGACGAGTT GGACGCCATT 
GGCACCAAGC GTTTCGATTC GGAGAAGGCC GGTGACCGTG AGGTCCAGCG AACTATGTTG 
GAGCTTCTTA ATCAGCTCGA TGGCTTCAGT TCCACTGCAG ATATTAAGGT GATTGCGGCC 
ACCAATCGCG TAGACATTCT GGATCCTGCT CTGCTGCGCT CTGGTCGTCT GGATCGTAAG 
ATCGAGTTCC CACATCCCAA CGAGGAAGCC CGTGCCCGTA TTATGCAGAT TCACTCGCGT 
AAAATGAACG TTAGCAATGA TGTGAATTTC GAGGAATTGT CCCGATCCAC GGATGACTTC 
AACGGCGCCC AGTGCAAAGC CGTCTGTGTG GAAGCTGGTA TGATCGCACT GCGTCGCTCC 
GCCAATTCGG TTACGCACGA AGACTTCATG GACGCCATCA TGGAAGTGCA GGCGAAGAAG 
AAGGCTAATC TTAACTACTA CGCTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Rpt5 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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