Gene Symbol | Ecr |
Entrez Gene ID | 100160393 |
Full Name | ecdysone receptor |
Gene Type | protein-coding |
Organism | Acyrthosiphon pisum(pea aphid) |
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ORF » Species Summary » Acyrthosiphon pisum » Ecr cDNA ORF clone
Gene Symbol | Ecr |
Entrez Gene ID | 100160393 |
Full Name | ecdysone receptor |
Gene Type | protein-coding |
Organism | Acyrthosiphon pisum(pea aphid) |
mRNA | Protein | Name |
---|---|---|
XM_008183993.2 | XP_008182215.1 | ecdysone receptor isoform X1 |
XM_008183993.3 | XP_008182215.1 | ecdysone receptor isoform X1 |
NM_001159359.1 | NP_001152831.1 | ecdysone receptor isoform A |
NM_001159360.1 | NP_001152832.1 | ecdysone receptor isoform B1 |
Structural diversity and evolution of the N-terminal isoform-specific region of ecdysone receptor-A and -B1 isoforms in insects.
Watanabe T, Takeuchi H, Kubo T
BMC evolutionary biology1040(2010 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Ecr gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ecr cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAd18465 | |
Clone ID Related Accession (Same CDS sequence) | NM_001159360.1 | |
Accession Version | NM_001159360.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1620bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1560614400000 | |
Organism | Acyrthosiphon pisum(pea aphid) | |
Product | ecdysone receptor isoform B1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AB490041.1 and ABLF02037583.1. Transcript Variant: This variant (B1) represents use of an alternate promoter and 5' exon and uses a distinct translation start site, compared to variant A. The resulting isoform (B1) has a shorter and distinct N-terminus, compared to isoform A. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMN00000061, SAMN00109689 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGTTGCGAC TCGCATCGCA GAACGACGGG GCCATGACTT CGTCGTCCGA AGTCACCTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001152832.1 |
CDS | 110..1729 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTTGCGAC TCGCATCGCA GAACGACGGG GCCATGACTT CGTCGTCCGA AGTCACCTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAd18524 | |
Clone ID Related Accession (Same CDS sequence) | NM_001159359.1 | |
Accession Version | NM_001159359.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1815bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1560614400000 | |
Organism | Acyrthosiphon pisum(pea aphid) | |
Product | ecdysone receptor isoform A | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AB490013.1 and ABLF02037583.1. On Apr 16, 2009 this sequence version replaced XM_001942632.1. Transcript Variant: This variant (A) represents the shorter transcript but encodes the longer isoform (A). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: FJ947150.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00000061, SAMN00109689 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGATGGACC AGAAATGTGA CGGCGGCGGT GGTGGTGTCG CTGCTGCCGC CGCCGGTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001152831.1 |
CDS | 154..1968 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGATGGACC AGAAATGTGA CGGCGGCGGT GGTGGTGTCG CTGCTGCCGC CGCCGGTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAd08283 | |
Clone ID Related Accession (Same CDS sequence) | XM_008183993.2 , XM_008183993.3 | |
Accession Version | XM_008183993.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1815bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1463328000000 | |
Organism | Acyrthosiphon pisum(pea aphid) | |
Product | ecdysone receptor isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003383721.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On May 17, 2016 this sequence version replaced XM_008183993.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Acyrthosiphon pisum Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGGACC AGAAATGTGA CGGCGGCGGT GGTGGTGTCG CTGCTGCCGC CGCCGGTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008182215.1 |
CDS | 680..2494 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGATGGACC AGAAATGTGA CGGCGGCGGT GGTGGTGTCG CTGCTGCCGC CGCCGGTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAd08283 | |
Clone ID Related Accession (Same CDS sequence) | XM_008183993.2 , XM_008183993.3 | |
Accession Version | XM_008183993.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1815bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1560441600000 | |
Organism | Acyrthosiphon pisum(pea aphid) | |
Product | ecdysone receptor isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_042494.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2019 this sequence version replaced XM_008183993.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Acyrthosiphon pisum Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGGACC AGAAATGTGA CGGCGGCGGT GGTGGTGTCG CTGCTGCCGC CGCCGGTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008182215.1 |
CDS | 689..2503 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGATGGACC AGAAATGTGA CGGCGGCGGT GGTGGTGTCG CTGCTGCCGC CGCCGGTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Structural diversity and evolution of the N-terminal isoform-specific region of ecdysone receptor-A and -B1 isoforms in insects. |