ORF » Species Summary » Danio rerio » Reactome

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Danio rerio (zebrafish)

Browse by Letter Index, Genomic Locus


Synthesis of PIPs at the late endosome membrane Glycerophospholipid catabolism
alpha-linolenic (omega3) and linoleic (omega6) acid metabolism Synthesis of (16-20)-hydroxyeicosatetraenoic acids (HETE)
Ubiquinol biosynthesis Acetylcholine regulates insulin secretion
Insulin effects increased synthesis of Xylulose-5-Phosphate AMPK inhibits chREBP transcriptional activation activity
ChREBP activates metabolic gene expression Metabolism of nitric oxide
eNOS activation and regulation eNOS activation
Metabolism of nucleotides Purine salvage
Pyrimidine metabolism Phosphate bond hydrolysis by NUDT proteins
Vitamin C (ascorbate) metabolism Vitamin B1 (thiamin) metabolism
Coenzyme A biosynthesis Nicotinate metabolism
Metabolism of folate and pterines Histidine catabolism
Tryptophan catabolism Metabolism of polyamines
Agmatine biosynthesis Amine-derived hormones
Glyoxylate metabolism and glycine degradation Sulfide oxidation to sulfate
Metabolism of ingested SeMet, Sec, MeSec into H2Se Metabolism of porphyrins
Heme degradation Endogenous sterols
Fatty acids Vitamins
Miscellaneous substrates PAOs oxidise polyamines to amines
HATs acetylate histones HDMs demethylate histones
PKMTs methylate histone lysines Organelle biogenesis and maintenance
Mitochondrial biogenesis Transcriptional activation of mitochondrial biogenesis
ARL13B-mediated ciliary trafficking of INPP5E Sema4D induced cell migration and growth-cone collapse
SEMA3A-Plexin repulsion signaling by inhibiting Integrin adhesion CRMPs in Sema3A signaling
Role of Abl in Robo-Slit signaling EPH-Ephrin signaling
Transcriptional regulation of pluripotent stem cells Cleavage of the damaged purine
Resolution of AP sites via the single-nucleotide replacement pathway APEX1-Independent Resolution of AP Sites via the Single Nucleotide Replacement Pathway
POLB-Dependent Long Patch Base Excision Repair Translesion synthesis by Y family DNA polymerases bypasses lesions on DNA template
DNA Double-Strand Break Repair Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks
HDR through Homologous Recombination (HR) or Single Strand Annealing (SSA) Homologous DNA Pairing and Strand Exchange
Resolution of D-loop Structures through Holliday Junction Intermediates Global Genome Nucleotide Excision Repair (GG-NER)
Formation of Incision Complex in GG-NER Dual incision in TC-NER
Gap-filling DNA repair synthesis and ligation in TC-NER Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)
Regulation by c-FLIP Intrinsic Pathway for Apoptosis
Release of apoptotic factors from the mitochondria Caspase-mediated cleavage of cytoskeletal proteins
Apoptosis induced DNA fragmentation Activation of DNA fragmentation factor
MET activates PTK2 signaling MET activates RAP1 and RAC1
Negative regulation of MET activity Keratinization
Ion influx/efflux at host-pathogen interface GABA synthesis
Serotonin clearance from the synaptic cleft Neurotransmitter uptake and Metabolism In Glial Cells
Acetylcholine Binding And Downstream Events Post NMDA receptor activation events
CREB phosphorylation through the activation of Adenylate Cyclase CREB phosphorylation through the activation of CaMKII
Ionotropic activity of Kainate Receptors Presynaptic function of Kainate receptors
Classical Kir channels Voltage gated Potassium channels
TWIK-related spinal cord K+ channel (TRESK) Mitophagy
PKA-mediated phosphorylation of CREB CaMK IV-mediated phosphorylation of CREB
RAF/MAP kinase cascade Regulation of RAS by GAPs
SHC1 events in EGFR signaling PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling
Negative regulation of FGFR1 signaling Spry regulation of FGF signaling
Downstream signaling of activated FGFR2 Negative regulation of FGFR2 signaling
FGFR3b ligand binding and activation FRS-mediated FGFR4 signaling
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