PBANKA_144890 cDNA ORF clone, Plasmodium berghei ANKA

Gene
Clones
gRNAs

Summary

Gene Symbol	PBANKA_144890
Entrez Gene ID	3425673
Full Name	DNA polymerase epsilon subunit b, putative
Synonyms	PB000827.02.0
Gene Type	protein-coding
Organism	Plasmodium berghei ANKA

mRNA and Protein(s)

mRNA	Protein	Name
XM_672058.1	XP_677150.1	DNA polymerase epsilon subunit b
XM_022858257.1	XP_022714094.1	DNA polymerase epsilon subunit b, putative

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
Otto TD, Böhme U, Jackson AP, Hunt M, Franke-Fayard B, Hoeijmakers WA, Religa AA, Robertson L, Sanders M, Ogun SA, Cunningham D, Erhart A, Billker O, Khan SM, Stunnenberg HG, Langhorne J, Holder AA, Waters AP, Newbold CI, Pain A, Berriman M, Janse CJ
BMC biology1286(2014 Oct)

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Hall N, Karras M, Raine JD, Carlton JM, Kooij TW, Berriman M, Florens L, Janssen CS, Pain A, Christophides GK, James K, Rutherford K, Harris B, Harris D, Churcher C, Quail MA, Ormond D, Doggett J, Trueman HE, Mendoza J, Bidwell SL, Rajandream MA, Carucci DJ, Yates JR 3rd, Kafatos FC, Janse CJ, Barrell B, Turner CM, Waters AP, Sinden RE
Science (New York, N.Y.)307(5706)82-6(2005 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following PBANKA_144890 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PBANKA_144890 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPm07681	XM_022858257.1 Latest version!	Plasmodium berghei ANKA DNA polymerase epsilon subunit b, putative (PBANKA_144890), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

PBANKA_144890 ( XM_022858257.1 ) cDNA ORF clone, Plasmodium berghei ANKA -> XP_022714094.1 Plasmodium berghei ANKA DNA polymerase epsilon subunit b, putative (PBANKA_144890), partial mRNA.

Price & Availability↑

CloneID	OPm07681
Clone ID Related Accession (Same CDS sequence)	XM_022858257.1
Accession Version	XM_022858257.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1872bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1508688000000
Organism	Plasmodium berghei ANKA
Product	DNA polymerase epsilon subunit b, putative
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_036172). COMPLETENESS: incomplete on both ends.

ATGAATAGTT TCATAAAAGA TAAAATTATT GGGGATGTAA TAAAAAGCCA TGATATAAAA 
AATATAAATT TATATTTAAC AAATATTGAA GAGCATATTA TAAAAATAAA AAATGAGGGA 
AAAAGTATAA TTGATCAAGT ATTTTTGGCT TTTAATGGAT CGATAAGTCA TATATCTTTA 
TACTCATATT TATATGATCA TAATATTAAT GTAGATTTAG ATTGCTTAAA TATTATTTAT 
GAACATAGTT ATGTAGAAGA AGACAAACTA ATAGAGGAAG GTAAAGATAA TGATAAAATT 
GTTGAAATAA CAAAATTTGA TTCAGAACTT ATGTATTATT TAGTAAAAAC ATATAAAGAA 
AATTTTGAAG GTAATCATAA TTTAACAGTT AAAGATATTG AAAATATTAT AATAGATTAT 
AAAGAAAAAA AATACCAAGA AACAATAAAA TTATATAAAG ACAAATATCG GGATGGAATA 
AAAATTTATA ATACATTTTT AGATTTAAGT CATTTTTATT ATGATGAAAA ACGTATGCGA 
TTTTTTAAAA AAAAAAAAGA AGGATCTATA GAAAATTATA ATGAATATAT AAATGCAAAT 
GCAGATGTTG AATTTTATGA TTTAAAATAT CACATATTAA GTAAAAAAAC AAAAGGCCAT 
CCATCAATTC TATTTTGGTC CGATGCAATT AATGAAATAC ATATCAAAGA CAAAACTATT 
ATCACATCTG TCGATGCTGT AAAACTAACA AATACGGATC ACCAGCATAT TATTGGAATA 
TTAGGATTAA ATAGAGATGG AGATTTAGTT ATACAAGGTA TTCGAAACGA AGTTAAATTA 
GTTATTAACA AATCATGTGT TATAAACCAT GGAATATATT GTATTGGTCA TGTTATACTA 
GTTCAAGGTC GAATCAAATT AGCAAATAAA ACATTTTATG CTACCGAAAT AATGCACCCC 
CCAAGAAATT ATCATGATGA AAAAAACGAA GGGGATTTAT TCTACAGCTT TGAAAACGAA 
AAAGACCAAA TTGGAATGAC AGAATACGAA CTGATCGTAA AAAATAACGA CAAAAGTCAA 
AACTGGATAA TAATGCATGA TATATATTTG GATAATCCTT ATACTTTTGA GATTTTAGAA 
AAAATGTTTT CTCTTTATGT AACTACATAT CCAGATAATG AATTACCTGT TGGGTTTATA 
TTAATGGGTG ATTTTATAAG TTTAAAATTC GATTATAATA AAAATTTTAA TAATTTATAT 
ATAAAAGGGT TTGAAAAATT ATCATATTTA CTAATATCAA AATTTAAATT AATTTTACAA 
AACTGTTATT TAGTTTTTAT TCCCGGAAAA AATGATCCGT GTGCATGTAA AAATAGTTTA 
CCAAAATTAC CAATTCTTCC ATATTATATT AAAAAGTTTA AAGAAAATAT AGAATCATTT 
TGTCCTTGTG AAGACAGAAT CATATTTGCA ACAAATCCAT GCCGAATTCG ACATTTTAAT 
AAAAAAATGA TATTTTTCAG ACACGATATA TTAAACGATT TAATTTGGAG TGCTTCTATA 
AATGCAACAG ATGATAACAA ACAAAATCTT CAAAATATTT TAACATCAAC TATTATAGGT 
CAAAGTCATA TATACCCAAT ACCTCATGAT AGTCGAATAC TAAAACGATA TTCTCCGTTT 
CTATTTATAT ACCCTTTACC AACTTTTATA TGTATATCTG ATAATACATG TAATAGTTTT 
ATATCATATG CTTCAGAAAA TACTAGTGAT TCGATCATAT CAAATTCAGA TATGTCATTT 
ACAAAAAAAA AAGCATTTAC TGTATATAAC GTCCTTCAAC ATGAAGCGAA GCGATACATC 
GTTCCTGTAT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_022714094.1
CDS	1..1872
Translation	MNSFIKDKIIGDVIKSHDIKNINLYLTNIEEHIIKIKNEGKSIIDQVFLAFNGSISHISLYSYLYDHNINVDLDCLNIIYEHSYVEEDKLIEEGKDNDKIVEITKFDSELMYYLVKTYKENFEGNHNLTVKDIENIIIDYKEKKYQETIKLYKDKYRDGIKIYNTFLDLSHFYYDEKRMRFFKKKKEGSIENYNEYINANADVEFYDLKYHILSKKTKGHPSILFWSDAINEIHIKDKTIITSVDAVKLTNTDHQHIIGILGLNRDGDLVIQGIRNEVKLVINKSCVINHGIYCIGHVILVQGRIKLANKTFYATEIMHPPRNYHDEKNEGDLFYSFENEKDQIGMTEYELIVKNNDKSQNWIIMHDIYLDNPYTFEILEKMFSLYVTTYPDNELPVGFILMGDFISLKFDYNKNFNNLYIKGFEKLSYLLISKFKLILQNCYLVFIPGKNDPCACKNSLPKLPILPYYIKKFKENIESFCPCEDRIIFATNPCRIRHFNKKMIFFRHDILNDLIWSASINATDDNKQNLQNILTSTIIGQSHIYPIPHDSRILKRYSPFLFIYPLPTFICISDNTCNSFISYASENTSDSIISNSDMSFTKKKAFTVYNVLQHEAKRYIVPV

Target ORF information:

RefSeq Version	XM_022858257.1
Organism	Plasmodium berghei ANKA
Definition	Plasmodium berghei ANKA DNA polymerase epsilon subunit b, putative (PBANKA_144890), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_022858257.1

ORF Insert Sequence:

ATGAATAGTT TCATAAAAGA TAAAATTATT GGGGATGTAA TAAAAAGCCA TGATATAAAA 
AATATAAATT TATATTTAAC AAATATTGAA GAGCATATTA TAAAAATAAA AAATGAGGGA 
AAAAGTATAA TTGATCAAGT ATTTTTGGCT TTTAATGGAT CGATAAGTCA TATATCTTTA 
TACTCATATT TATATGATCA TAATATTAAT GTAGATTTAG ATTGCTTAAA TATTATTTAT 
GAACATAGTT ATGTAGAAGA AGACAAACTA ATAGAGGAAG GTAAAGATAA TGATAAAATT 
GTTGAAATAA CAAAATTTGA TTCAGAACTT ATGTATTATT TAGTAAAAAC ATATAAAGAA 
AATTTTGAAG GTAATCATAA TTTAACAGTT AAAGATATTG AAAATATTAT AATAGATTAT 
AAAGAAAAAA AATACCAAGA AACAATAAAA TTATATAAAG ACAAATATCG GGATGGAATA 
AAAATTTATA ATACATTTTT AGATTTAAGT CATTTTTATT ATGATGAAAA ACGTATGCGA 
TTTTTTAAAA AAAAAAAAGA AGGATCTATA GAAAATTATA ATGAATATAT AAATGCAAAT 
GCAGATGTTG AATTTTATGA TTTAAAATAT CACATATTAA GTAAAAAAAC AAAAGGCCAT 
CCATCAATTC TATTTTGGTC CGATGCAATT AATGAAATAC ATATCAAAGA CAAAACTATT 
ATCACATCTG TCGATGCTGT AAAACTAACA AATACGGATC ACCAGCATAT TATTGGAATA 
TTAGGATTAA ATAGAGATGG AGATTTAGTT ATACAAGGTA TTCGAAACGA AGTTAAATTA 
GTTATTAACA AATCATGTGT TATAAACCAT GGAATATATT GTATTGGTCA TGTTATACTA 
GTTCAAGGTC GAATCAAATT AGCAAATAAA ACATTTTATG CTACCGAAAT AATGCACCCC 
CCAAGAAATT ATCATGATGA AAAAAACGAA GGGGATTTAT TCTACAGCTT TGAAAACGAA 
AAAGACCAAA TTGGAATGAC AGAATACGAA CTGATCGTAA AAAATAACGA CAAAAGTCAA 
AACTGGATAA TAATGCATGA TATATATTTG GATAATCCTT ATACTTTTGA GATTTTAGAA 
AAAATGTTTT CTCTTTATGT AACTACATAT CCAGATAATG AATTACCTGT TGGGTTTATA 
TTAATGGGTG ATTTTATAAG TTTAAAATTC GATTATAATA AAAATTTTAA TAATTTATAT 
ATAAAAGGGT TTGAAAAATT ATCATATTTA CTAATATCAA AATTTAAATT AATTTTACAA 
AACTGTTATT TAGTTTTTAT TCCCGGAAAA AATGATCCGT GTGCATGTAA AAATAGTTTA 
CCAAAATTAC CAATTCTTCC ATATTATATT AAAAAGTTTA AAGAAAATAT AGAATCATTT 
TGTCCTTGTG AAGACAGAAT CATATTTGCA ACAAATCCAT GCCGAATTCG ACATTTTAAT 
AAAAAAATGA TATTTTTCAG ACACGATATA TTAAACGATT TAATTTGGAG TGCTTCTATA 
AATGCAACAG ATGATAACAA ACAAAATCTT CAAAATATTT TAACATCAAC TATTATAGGT 
CAAAGTCATA TATACCCAAT ACCTCATGAT AGTCGAATAC TAAAACGATA TTCTCCGTTT 
CTATTTATAT ACCCTTTACC AACTTTTATA TGTATATCTG ATAATACATG TAATAGTTTT 
ATATCATATG CTTCAGAAAA TACTAGTGAT TCGATCATAT CAAATTCAGA TATGTCATTT 
ACAAAAAAAA AAGCATTTAC TGTATATAAC GTCCTTCAAC ATGAAGCGAA GCGATACATC 
GTTCCTGTAT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
BMC biology1286(2014 Oct)
Otto TD,Böhme U,Jackson AP,Hunt M,Franke-Fayard B,Hoeijmakers WA,Religa AA,Robertson L,Sanders M,Ogun SA,Cunningham D,Erhart A,Billker O,Khan SM,Stunnenberg HG,Langhorne J,Holder AA,Waters AP,Newbold CI,Pain A,Berriman M,Janse CJ

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Science (New York, N.Y.)307(5706)82-6(2005 Jan)
Hall N,Karras M,Raine JD,Carlton JM,Kooij TW,Berriman M,Florens L,Janssen CS,Pain A,Christophides GK,James K,Rutherford K,Harris B,Harris D,Churcher C,Quail MA,Ormond D,Doggett J,Trueman HE,Mendoza J,Bidwell SL,Rajandream MA,Carucci DJ,Yates JR 3rd,Kafatos FC,Janse CJ,Barrell B,Turner CM,Waters AP,Sinden RE

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PBANKA_144890 cDNA ORF clone, Plasmodium berghei ANKA

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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