PB000002.02.0 cDNA ORF clone, Plasmodium berghei ANKA

Gene
Clones
gRNAs

Summary

Gene Symbol	PB000002.02.0
Entrez Gene ID	3423343
Full Name	pre-mRNA-splicing factor ATP-dependent RNA helicase PRP2, putative
Synonyms	PB000002.02.0
Gene Type	protein-coding
Organism	Plasmodium berghei ANKA

mRNA and Protein(s)

mRNA	Protein	Name
XM_669795.2	XP_674887.2	pre-mRNA-splicing factor ATP-dependent RNA helicase PRP2, putative
XM_669795.1	XP_674887.1	pre-mRNA splicing factor RNA helicase

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
Otto TD, Böhme U, Jackson AP, Hunt M, Franke-Fayard B, Hoeijmakers WA, Religa AA, Robertson L, Sanders M, Ogun SA, Cunningham D, Erhart A, Billker O, Khan SM, Stunnenberg HG, Langhorne J, Holder AA, Waters AP, Newbold CI, Pain A, Berriman M, Janse CJ
BMC biology1286(2014 Oct)

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Hall N, Karras M, Raine JD, Carlton JM, Kooij TW, Berriman M, Florens L, Janssen CS, Pain A, Christophides GK, James K, Rutherford K, Harris B, Harris D, Churcher C, Quail MA, Ormond D, Doggett J, Trueman HE, Mendoza J, Bidwell SL, Rajandream MA, Carucci DJ, Yates JR 3rd, Kafatos FC, Janse CJ, Barrell B, Turner CM, Waters AP, Sinden RE
Science (New York, N.Y.)307(5706)82-6(2005 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following PB000002.02.0 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PB000002.02.0 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPm07657	XM_669795.2 Latest version!	Plasmodium berghei ANKA pre-mRNA-splicing factor ATP-dependent RNA helicase PRP2, putative (PBANKA_144630), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

PB000002.02.0 ( XM_669795.2 ) cDNA ORF clone, Plasmodium berghei ANKA -> XP_674887.2 Plasmodium berghei ANKA pre-mRNA-splicing factor ATP-dependent RNA helicase PRP2, putative (PBANKA_144630), partial mRNA.

Price & Availability↑

CloneID	OPm07657
Clone ID Related Accession (Same CDS sequence)	XM_669795.2
Accession Version	XM_669795.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3174bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1508688000000
Organism	Plasmodium berghei ANKA
Product	pre-mRNA-splicing factor ATP-dependent RNA helicase PRP2, putative
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_036172). On Oct 24, 2017 this sequence version replaced XM_669795.1. COMPLETENESS: incomplete on both ends.

ATGAAAGAAA AAGGTGAAAT TAACAAAAGG GCACTAGATT TTAAAGGGAA TGACGAATCA 
ATAAAAAAAA TAAAAACTAG CGATGATGAA AAAGAATATG AGAAAAAAAA CTCAAATGAT 
GCTGAAAGTA AAATAGATAG TTCCTATTCT TTATATTTAG AATGCCAGAA AGGAAGAAAC 
AAAAATTTAA AAGACAATTT AGAGTATATA GAATTGTTAA AAAAAAATGC AAGAAGAAAA 
TACTTGAAAG AAAGAGAAAA AGAAAAATTA GATATAACAA AAAAGTTGCT AGATGATGAA 
CTATTATATA GCGGAATTAA ATTAGACGAA AAGGATATTA AAGAATTGGA GTTTTCTAAA 
AAAATTTATA ATATATCGAA AGAAAATGTA AAATTAAGGG AAAAAATGCA AGAAAGTTAT 
TACACTTATC AAGAAGATAT TGATGAAAAA TATAATAACC TTATAGGAAA TATATTACAA 
CAAAATGATA ATAATGCAGA TCCATCTTTA TATAACTATG ATCAGCAAAT AATTAATAAG 
GGGATAATGA AATTTGGCTC AGAATCCATT CAAAAAAATA ATTTTACAAC TGACTTTGTT 
TTTGATAATG ATATTGATTA TGCAAAGGAT ACAAAGAAAG AAATAATAGA AGATAAAGAA 
AAAGATAAGA ATAGAGATAA GCATAAAAGT AAAGACAAAG AAAGGGATAA AAAAAGTGAA 
AAAAAAAAAT ATAAAGAAAA ACATGGAGAA AAATATTATA ATAAACATGA AATGAAAAGT 
GATAAATATA AAAAATATAG TAGTAGTGAT GATAGCAATA GTAGTAATTT TGAAAAAATA 
AGCAAAAGTA AAAAAAATAA AACTGAAATA GAAAAGGAGA AAAAAAACAT AAAAAGGGGT 
GAAAGTGGCG ATGAAAAAAA ATTATCAGAA ATGAAAAATA GTCTAAATGA TGCTGTAGAA 
TTTGTTCATT TAGATAGTTT GTCTGGTATG AGTGAAAAAG AGAAAGAATT ACAAAAACTT 
TTTGAAGATA TCCAAAAAAA TAAAGAAAAA AAAATGAAAC AAATAATTAA TGAAAGGAAA 
AGATTGCCTA TATATAGTTA TAGATATGAT ATATTGAAAG CTATAAAAAA TAATAAAATT 
TTAATATTAG TTGGAGAAAC AGGAAGTGGG AAAAGTACAC AACTAACACA ATATTTATAT 
GAATGTAAGT ATCACTTATA TGGGAATATA ATATGTACAC AGCCAAGAAG AATAGCTTGT 
ATAGCTATAG CAAATAGAGT AGCTGATGAA ATGAATGTAA AAGTGGGGAA AGAAGTTGGT 
TATGTTATAA GGTTTCAAAA TAAAACAAGT GAAAACACAA AGGTTATATA TATGACAGAT 
GGTATGTTTT TACGTTTATT ATTATATAAT CCAACTTTAG AAGGTATATC AGTTTTAATT 
GTTGATGAAG CTCATGAAAG AGCATTACAT ACAGATGTTA TATTACCAAT AATTAAAGAT 
ATATGTAATT TTAGAGAAAA TATAAGAATT GTCATATCAT CAGCAACGTT AGATGCCGAA 
AAAATTTCTT CCTATTTTAA TTGTGCACCA ATATTTTATG TCCCAGGAAG AAAATATAAT 
GTCGATATTT ATTATACTAT TAATAATGAA AGTAATTATT TATCTGCTAT TGTTATAACT 
ATATTACAAA TTCATATAAC ACAAGGAAAA GGTGATATAT TAGTTTTTTT ACCTGGTCAA 
TTTGAAATTG AATTAGTTCA ACAAGAACTT GAAAGTAAAT TAAATGAATT AGCTCCGAAA 
TTTCGGAGCA TGATTATATT ACCTATTTAT TCTTCTTTAC CTGCTGAATG CCAATCACGT 
ATATTTGAAG ATATCGGAAA TGAGGATGAT ATACAAAATG AAAATAATGA CAACGACAAT 
AAAAGTGACA AAAGTGACGA TAAGAAAAGT ATTGATAATG AATATAAAAA AAATAATACA 
GCAAAAGATG AAGAAAATAG GTTAAGCACA ATCTCAAATA ATAATAAAAA AAAAAGTAAT 
AATGAAAATG TTAAATTAGC TACAAATAAT ATACGAAGAA AAATTATACT TTCAACAAAT 
ATATGTGAAA CTAGTATTAC TATAGATAAT ATAATATATG TTATAGATTC AGGCTTGTGT 
AAACAAAAAA TATATAACCC TAATTCGGGT ATCGAATCTT TAGTCACTTT ACCATGCTCT 
AAAGCATCTG TTAATCAAAG AGCTGGTAGG GCTGGTAGAA AACAAGATGG AAAATGCTTT 
AGATTATTTA CAAAAAAATC TTTTATTGAT TTAAGTGATA ATTCTATTCC AGAAATTCAA 
CGCTGTGAAA TTAGTAGTAT GATATTATTA TTAAAAAGTT TAGGAATGGA TGATATTATT 
AACTTTGATT TTTTAGATCC ACCGTCTCCT GTTGTTATAA TAAAAGGACT TGAGCTTCTC 
TATTCATTGG GTGCATTAAA TAATGAAGGA AATTTAACAA AAACTGGAAG GAAAATGGCT 
GAATTCCCAA CAGATGTAAA ATCGAGTAAA ATGATTTTAT CGGCATCGGA AAAATATAAT 
TGTGTTGATG AAATATTAAG TATTATATCC ATGTTAACTC ATGCCAACAG TATTTTTTAT 
GTTCAAAAAG GAAAAGAAAA AGAAGCAGAT AATGTTAAAA AAATTTTTAT TATAGAAGGT 
GGTGGTGATT TTTTTATGTT TTTAAATATT TTTAAACAAT GTGAAGAAAA TAATTTCTCC 
ACCTCGTATT GCTATGATCA CTTTTTACAA TATCATACAC TTATTAAAAT AAAGGATATA 
AAAACACAGC TAATTAGTAT ATGTGAAAAA CTCGATTTAC CAATAACTTC ATGTGGAATC 
GAAAAACACG ATTCTATATC TAATATTAAA AAATGTATAA TAAGCGGGTT TTTTACTAAT 
GCTGCTTTGC CAATTAATAA AACCGAGCTC AAAATAATTA AATTAAATCA GGTTGTTAGT 
ATATATCCAA GTTCGGTACT ATCAAAAAAA AATATTATGG AGGAATATCA CAACTCATGC 
ATTATTTTTT ATGAAGTTAT TAAGATAAAT AAGTCGTATA TACGTTACAA CATAGATGTG 
AATAAAGATC TTCTTTTTGA AATTGCATCC TTTTACTTTT TCACCAAAAA TTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_674887.2
CDS	1..3174
Translation	MKEKGEINKRALDFKGNDESIKKIKTSDDEKEYEKKNSNDAESKIDSSYSLYLECQKGRNKNLKDNLEYIELLKKNARRKYLKEREKEKLDITKKLLDDELLYSGIKLDEKDIKELEFSKKIYNISKENVKLREKMQESYYTYQEDIDEKYNNLIGNILQQNDNNADPSLYNYDQQIINKGIMKFGSESIQKNNFTTDFVFDNDIDYAKDTKKEIIEDKEKDKNRDKHKSKDKERDKKSEKKKYKEKHGEKYYNKHEMKSDKYKKYSSSDDSNSSNFEKISKSKKNKTEIEKEKKNIKRGESGDEKKLSEMKNSLNDAVEFVHLDSLSGMSEKEKELQKLFEDIQKNKEKKMKQIINERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHLYGNIICTQPRRIACIAIANRVADEMNVKVGKEVGYVIRFQNKTSENTKVIYMTDGMFLRLLLYNPTLEGISVLIVDEAHERALHTDVILPIIKDICNFRENIRIVISSATLDAEKISSYFNCAPIFYVPGRKYNVDIYYTINNESNYLSAIVITILQIHITQGKGDILVFLPGQFEIELVQQELESKLNELAPKFRSMIILPIYSSLPAECQSRIFEDIGNEDDIQNENNDNDNKSDKSDDKKSIDNEYKKNNTAKDEENRLSTISNNNKKKSNNENVKLATNNIRRKIILSTNICETSITIDNIIYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRAGRAGRKQDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPVVIIKGLELLYSLGALNNEGNLTKTGRKMAEFPTDVKSSKMILSASEKYNCVDEILSIISMLTHANSIFYVQKGKEKEADNVKKIFIIEGGGDFFMFLNIFKQCEENNFSTSYCYDHFLQYHTLIKIKDIKTQLISICEKLDLPITSCGIEKHDSISNIKKCIISGFFTNAALPINKTELKIIKLNQVVSIYPSSVLSKKNIMEEYHNSCIIFYEVIKINKSYIRYNIDVNKDLLFEIASFYFFTKN

Target ORF information:

RefSeq Version	XM_669795.2
Organism	Plasmodium berghei ANKA
Definition	Plasmodium berghei ANKA pre-mRNA-splicing factor ATP-dependent RNA helicase PRP2, putative (PBANKA_144630), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_669795.2

ORF Insert Sequence:

ATGAAAGAAA AAGGTGAAAT TAACAAAAGG GCACTAGATT TTAAAGGGAA TGACGAATCA 
ATAAAAAAAA TAAAAACTAG CGATGATGAA AAAGAATATG AGAAAAAAAA CTCAAATGAT 
GCTGAAAGTA AAATAGATAG TTCCTATTCT TTATATTTAG AATGCCAGAA AGGAAGAAAC 
AAAAATTTAA AAGACAATTT AGAGTATATA GAATTGTTAA AAAAAAATGC AAGAAGAAAA 
TACTTGAAAG AAAGAGAAAA AGAAAAATTA GATATAACAA AAAAGTTGCT AGATGATGAA 
CTATTATATA GCGGAATTAA ATTAGACGAA AAGGATATTA AAGAATTGGA GTTTTCTAAA 
AAAATTTATA ATATATCGAA AGAAAATGTA AAATTAAGGG AAAAAATGCA AGAAAGTTAT 
TACACTTATC AAGAAGATAT TGATGAAAAA TATAATAACC TTATAGGAAA TATATTACAA 
CAAAATGATA ATAATGCAGA TCCATCTTTA TATAACTATG ATCAGCAAAT AATTAATAAG 
GGGATAATGA AATTTGGCTC AGAATCCATT CAAAAAAATA ATTTTACAAC TGACTTTGTT 
TTTGATAATG ATATTGATTA TGCAAAGGAT ACAAAGAAAG AAATAATAGA AGATAAAGAA 
AAAGATAAGA ATAGAGATAA GCATAAAAGT AAAGACAAAG AAAGGGATAA AAAAAGTGAA 
AAAAAAAAAT ATAAAGAAAA ACATGGAGAA AAATATTATA ATAAACATGA AATGAAAAGT 
GATAAATATA AAAAATATAG TAGTAGTGAT GATAGCAATA GTAGTAATTT TGAAAAAATA 
AGCAAAAGTA AAAAAAATAA AACTGAAATA GAAAAGGAGA AAAAAAACAT AAAAAGGGGT 
GAAAGTGGCG ATGAAAAAAA ATTATCAGAA ATGAAAAATA GTCTAAATGA TGCTGTAGAA 
TTTGTTCATT TAGATAGTTT GTCTGGTATG AGTGAAAAAG AGAAAGAATT ACAAAAACTT 
TTTGAAGATA TCCAAAAAAA TAAAGAAAAA AAAATGAAAC AAATAATTAA TGAAAGGAAA 
AGATTGCCTA TATATAGTTA TAGATATGAT ATATTGAAAG CTATAAAAAA TAATAAAATT 
TTAATATTAG TTGGAGAAAC AGGAAGTGGG AAAAGTACAC AACTAACACA ATATTTATAT 
GAATGTAAGT ATCACTTATA TGGGAATATA ATATGTACAC AGCCAAGAAG AATAGCTTGT 
ATAGCTATAG CAAATAGAGT AGCTGATGAA ATGAATGTAA AAGTGGGGAA AGAAGTTGGT 
TATGTTATAA GGTTTCAAAA TAAAACAAGT GAAAACACAA AGGTTATATA TATGACAGAT 
GGTATGTTTT TACGTTTATT ATTATATAAT CCAACTTTAG AAGGTATATC AGTTTTAATT 
GTTGATGAAG CTCATGAAAG AGCATTACAT ACAGATGTTA TATTACCAAT AATTAAAGAT 
ATATGTAATT TTAGAGAAAA TATAAGAATT GTCATATCAT CAGCAACGTT AGATGCCGAA 
AAAATTTCTT CCTATTTTAA TTGTGCACCA ATATTTTATG TCCCAGGAAG AAAATATAAT 
GTCGATATTT ATTATACTAT TAATAATGAA AGTAATTATT TATCTGCTAT TGTTATAACT 
ATATTACAAA TTCATATAAC ACAAGGAAAA GGTGATATAT TAGTTTTTTT ACCTGGTCAA 
TTTGAAATTG AATTAGTTCA ACAAGAACTT GAAAGTAAAT TAAATGAATT AGCTCCGAAA 
TTTCGGAGCA TGATTATATT ACCTATTTAT TCTTCTTTAC CTGCTGAATG CCAATCACGT 
ATATTTGAAG ATATCGGAAA TGAGGATGAT ATACAAAATG AAAATAATGA CAACGACAAT 
AAAAGTGACA AAAGTGACGA TAAGAAAAGT ATTGATAATG AATATAAAAA AAATAATACA 
GCAAAAGATG AAGAAAATAG GTTAAGCACA ATCTCAAATA ATAATAAAAA AAAAAGTAAT 
AATGAAAATG TTAAATTAGC TACAAATAAT ATACGAAGAA AAATTATACT TTCAACAAAT 
ATATGTGAAA CTAGTATTAC TATAGATAAT ATAATATATG TTATAGATTC AGGCTTGTGT 
AAACAAAAAA TATATAACCC TAATTCGGGT ATCGAATCTT TAGTCACTTT ACCATGCTCT 
AAAGCATCTG TTAATCAAAG AGCTGGTAGG GCTGGTAGAA AACAAGATGG AAAATGCTTT 
AGATTATTTA CAAAAAAATC TTTTATTGAT TTAAGTGATA ATTCTATTCC AGAAATTCAA 
CGCTGTGAAA TTAGTAGTAT GATATTATTA TTAAAAAGTT TAGGAATGGA TGATATTATT 
AACTTTGATT TTTTAGATCC ACCGTCTCCT GTTGTTATAA TAAAAGGACT TGAGCTTCTC 
TATTCATTGG GTGCATTAAA TAATGAAGGA AATTTAACAA AAACTGGAAG GAAAATGGCT 
GAATTCCCAA CAGATGTAAA ATCGAGTAAA ATGATTTTAT CGGCATCGGA AAAATATAAT 
TGTGTTGATG AAATATTAAG TATTATATCC ATGTTAACTC ATGCCAACAG TATTTTTTAT 
GTTCAAAAAG GAAAAGAAAA AGAAGCAGAT AATGTTAAAA AAATTTTTAT TATAGAAGGT 
GGTGGTGATT TTTTTATGTT TTTAAATATT TTTAAACAAT GTGAAGAAAA TAATTTCTCC 
ACCTCGTATT GCTATGATCA CTTTTTACAA TATCATACAC TTATTAAAAT AAAGGATATA 
AAAACACAGC TAATTAGTAT ATGTGAAAAA CTCGATTTAC CAATAACTTC ATGTGGAATC 
GAAAAACACG ATTCTATATC TAATATTAAA AAATGTATAA TAAGCGGGTT TTTTACTAAT 
GCTGCTTTGC CAATTAATAA AACCGAGCTC AAAATAATTA AATTAAATCA GGTTGTTAGT 
ATATATCCAA GTTCGGTACT ATCAAAAAAA AATATTATGG AGGAATATCA CAACTCATGC 
ATTATTTTTT ATGAAGTTAT TAAGATAAAT AAGTCGTATA TACGTTACAA CATAGATGTG 
AATAAAGATC TTCTTTTTGA AATTGCATCC TTTTACTTTT TCACCAAAAA TTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
BMC biology1286(2014 Oct)
Otto TD,Böhme U,Jackson AP,Hunt M,Franke-Fayard B,Hoeijmakers WA,Religa AA,Robertson L,Sanders M,Ogun SA,Cunningham D,Erhart A,Billker O,Khan SM,Stunnenberg HG,Langhorne J,Holder AA,Waters AP,Newbold CI,Pain A,Berriman M,Janse CJ

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Science (New York, N.Y.)307(5706)82-6(2005 Jan)
Hall N,Karras M,Raine JD,Carlton JM,Kooij TW,Berriman M,Florens L,Janssen CS,Pain A,Christophides GK,James K,Rutherford K,Harris B,Harris D,Churcher C,Quail MA,Ormond D,Doggett J,Trueman HE,Mendoza J,Bidwell SL,Rajandream MA,Carucci DJ,Yates JR 3rd,Kafatos FC,Janse CJ,Barrell B,Turner CM,Waters AP,Sinden RE

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PB000002.02.0 cDNA ORF clone, Plasmodium berghei ANKA

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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