LOC103643160 cDNA ORF clone, Zea mays

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC103643160
Entrez Gene ID	103643160
Full Name	ubiquitin carboxyl-terminal hydrolase 17-like
Synonyms	GRMZM2G136443,pco105498b
Gene Type	protein-coding
Organism	Zea mays

mRNA and Protein(s)

mRNA	Protein	Name
NM_001326697.1	NP_001313626.1	uncharacterized protein LOC103643160

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
Soderlund C, Descour A, Kudrna D, Bomhoff M, Boyd L, Currie J, Angelova A, Collura K, Wissotski M, Ashley E, Morrow D, Fernandes J, Walbot V, Yu Y
PLoS genetics5(11)e1000740(2009 Nov)

Insights into corn genes derived from large-scale cDNA sequencing.
Alexandrov NN, Brover VV, Freidin S, Troukhan ME, Tatarinova TV, Zhang H, Swaller TJ, Lu YP, Bouck J, Flavell RB, Feldmann KA
Plant molecular biology69(1-2)179-94(2009 Jan)

Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization.
Gardiner J, Schroeder S, Polacco ML, Sanchez-Villeda H, Fang Z, Morgante M, Landewe T, Fengler K, Useche F, Hanafey M, Tingey S, Chou H, Wing R, Soderlund C, Coe EH Jr
Plant physiology134(4)1317-26(2004 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC103643160 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC103643160 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OZa53934	NM_001326697.1 Latest version!	Zea mays ubiquitin carboxyl-terminal hydrolase 17-like (LOC103643160), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC103643160 ( NM_001326697.1 ) cDNA ORF clone, Zea mays -> NP_001313626.1 Zea mays ubiquitin carboxyl-terminal hydrolase 17-like (LOC103643160), mRNA.

Price & Availability↑

CloneID	OZa53934
Clone ID Related Accession (Same CDS sequence)	NM_001326697.1
Accession Version	NM_001326697.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2922bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1504627200000
Organism	Zea mays
Product	uncharacterized protein LOC103643160
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EE169047.2, LPUQ01002029.1, AI657260.1, DV521858.1 and BT038017.1. ##Evidence-Data-START## Transcript exon combination :: SRR3147047.11322.1, SRR3147035.6472.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01096209 [ECO:0000348] ##Evidence-Data-END##

ATGGAGGAGG CGGCGGAGTC GTCCTCGGCG GCGGCGGCGG CGGCCCTGGT GCTGGCGCTG 
GTGGCGCTCG TCGTGGTGCC GGCGGTGGCG CTGCTGGTGC GGGGCCGCTG GCGCCGGGCC 
GCGGCGCGGA GGGAGGAGGT GCGCCGCCTC GCGCGGCTGG CTGCCGAGGA GTCCGAGCTG 
GCGGAGCGCG AGTCCGCGCT TGCCTACTAC TCCGAGCTGT TCCCGGGCGT CGTGCACGCC 
GCGGGGGCGC CCGAGTGGGG CCCGCCGCCG GTGGCGGTCC CGGTCCCGGC GCAGGAGGAG 
TTCGACGCGC AGCCGCAGCC GTCCGTGGGG GCAAAGGGGG TCTGTGCGGT GTGCTTCAGG 
CCCACCACGT TCAGGTGCAA GCAGTGCAAG GCCGTCAAGT ACTGTTCCTT CAAATGCCAG 
ATAGCCCACT GGAGACAAGG TCACAAAGAT GAATGCCATC CACCAAGTGT TAATACTAGG 
CCTGATGATG AAGAAGAAAA GGCTGAAGTG GGAAAATCTG CCAAAGAGAA TGCATCAGTT 
GGTGTTAAAC AGGATGCTCA AATGAACAAA CCAGCTGTTG GATCTGAAAC TTCTGATGCA 
AACCATGATT TGAAGAGTTC AAATGGTAAA AGTAAACATA TGCCTTCTGA AGCAGTATGT 
ACCAGTGCAG AGATTCCTGG AGGTCATAAG TCCAACAGCA CAGTTGAAAT TGATCAAAAC 
ATTCAGTCTG TTGACAGTAG TAAGATGGGA TCAAGTATCA AACATGCAAA TTTTGTTGAA 
GATGGTTCTT CCACCGTGGA CTTAAATGAG GCATTGCCAT GTAACTCTCA TTCTTCTTCA 
CCAAACATTA ATGGTCATAG CAGTTTTGTA AACGAAGAAT TCTGCAATCA TTCCAAGGAA 
CACCAAAGAG CTAAGGATGC CAGTGTTGTT GAGGATTGTT CTCAGACAAG CAGTACCAGG 
GAGCTTGAAG ACAGTAGCAT TCCCCACGCA GCTGCATCTG TTGTCTTGGA GTCCAAAAGT 
TCTAGGACTC CTATTCATGT AGAACTTGAG AGGTCTAAAA CAAAATCTGC TGGGAATGAC 
AGCATTCAGA GCACGAAACC TGTGCCATCT GCATTGACTG TTGACAAAGC CACTTCAGTT 
CGTGGGAGTC TTTCTATTAC ACCTAATAAT TCATCTAAAG TAGCAGATAG TCTTCCTGAC 
AGAAGTTTTA AACCTTCAGA TAGGTCAGGC TCAACAACAA ATAACCTTGC AACATCTCTG 
AAGAAAATGG TCAGGCAGCA AACTGCACCA AAAGTTGTGA GGCATTATCC ATCAGAATCG 
ACTCTCTTCC CATATGAACT TTTTGTGAAG CTCTACAGCA AGGTTGAGTT GCACCCTTTT 
GGTCTTCATA ACCTCGGTAA CAGTTGCTAT GCAAATGCTG TTTTTCAGTG TTTGATGTTT 
ACTCGACCAC TCACAACATA TCTTTTGGAA GGGCTTCACT CAAAAAACTG TTCTCAAAAC 
GGATGGTGCT TCATGTGTGA ATTTGAAAAA CTCATTGTGG AGGGCAAACG ACGCAAGATT 
GCCTTGTCAC CGACTGGAAT ACTCTCTCAT TTGAATGACA TTGGCAGTAG CTTTGGTCCT 
GGTAAACAAG AAGATGCTCA TGAATTTCTT AGGTATGCAA TTGATGCTAT GCAATCCGTA 
TGCATGAAGG AAGCTAGAAA AGGAGGTGTT CTTCAGTCAG CGGAAGAAAC AACTCTTGTG 
CAATTGATAT TTGGTGGATA TCTGCGGTCT AAGATCAAGT GCTCAAGGTG CCATGTTAGT 
TCTGAACAGT GTGAGCCCAT GTTGGATCTT ACTGTCGAAA TAGATGGTGA CATTAGTTCG 
CTCGGTGAGG CACTCGTGCG CTTTACATCC ACAGAAGTCT TGGATGGAGA AAACAAATAT 
CACTGCAGCA GATGCAAATC CTATGAGCGT GCTAAAAAGA AGCTGACAAT AGAAGAAGCA 
CCGAATATTC TGACTATTGC ACTGAAAAGA TATCAGTCTG GCAAGTTTGG AAAGATCAGC 
AAAGCCATCA GATTTCCAGA AACCCTCAAC TTGGCTCGCT ATATGAACCC AGATACTGAT 
GACATATCGC CAGTTTACAG CCTCTATGCA GTGGTTGTCC ATCATGATGT CATGAATGCT 
GCCTTCTCTG GCCATTATGT ATGTTATGTT AAAGATACAC AGGGAAAGTG GTTTAAGGCA 
GACGACAGCC AGGTGAAACC TGTATCTCTG GACAATGTCA TGTCAAAGTG TGCTTATATG 
CTGCTGTATG CAAGATGTTC ACCGAGGGCA CCAAGCTCTG TTAGGCAGGC TATGTCGGAC 
CCAGCACACC CGAAGCAGGC CAAGCAGAGG GTGGTTCCAG GAGGACCAAC ATGGCGAGGA 
GGTTCCTTCA ACGGGCACCA AGCTGGCCAG CGGCACAGCG ACGACGCGGA AGACGACGAC 
GCCACACATG CTGCATTTGA CGAATATAGA TACGCACCAT ATTCGCCTTC AGATTCTCCG 
AGCCCTAGCG AGAGTTCATC CCTCTTCAGC AACTCCGACG CAGGGTCGCA CAGCACCGAC 
AGCAGCGAGA GCACGAGGAA CTCGACAAGC ACCGAGGAGT ACGAGTACGT GTTCGGAGCC 
GCTGATCAGA TGTACCGCGT GGGAGGGGGG ACACCTGTGG AGGGTGGCTA TCCGACGTAT 
TCCCGTTCGA GGTCCAGCTT GAATGCCAGC TCATCGGGGC GGGAGGCATA CAGCGCGGGT 
ACCTACGCTG AGCACAGGAC TCAGGGCGGC GGTCCCGGTG GGCTTTGGGT TGAGGGCGAT 
GAGAGCCCGT CCTTGTTATA CACTGACAGA AGTAAACAGC CGTCGAACAG TACGTTAAGA 
GACCAGTATA GGCAGTTAGA TAGGAGCGAT GAGCGAACAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001313626.1
CDS	190..3111
Translation	MEEAAESSSAAAAAALVLALVALVVVPAVALLVRGRWRRAAARREEVRRLARLAAEESELAERESALAYYSELFPGVVHAAGAPEWGPPPVAVPVPAQEEFDAQPQPSVGAKGVCAVCFRPTTFRCKQCKAVKYCSFKCQIAHWRQGHKDECHPPSVNTRPDDEEEKAEVGKSAKENASVGVKQDAQMNKPAVGSETSDANHDLKSSNGKSKHMPSEAVCTSAEIPGGHKSNSTVEIDQNIQSVDSSKMGSSIKHANFVEDGSSTVDLNEALPCNSHSSSPNINGHSSFVNEEFCNHSKEHQRAKDASVVEDCSQTSSTRELEDSSIPHAAASVVLESKSSRTPIHVELERSKTKSAGNDSIQSTKPVPSALTVDKATSVRGSLSITPNNSSKVADSLPDRSFKPSDRSGSTTNNLATSLKKMVRQQTAPKVVRHYPSESTLFPYELFVKLYSKVELHPFGLHNLGNSCYANAVFQCLMFTRPLTTYLLEGLHSKNCSQNGWCFMCEFEKLIVEGKRRKIALSPTGILSHLNDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKGGVLQSAEETTLVQLIFGGYLRSKIKCSRCHVSSEQCEPMLDLTVEIDGDISSLGEALVRFTSTEVLDGENKYHCSRCKSYERAKKKLTIEEAPNILTIALKRYQSGKFGKISKAIRFPETLNLARYMNPDTDDISPVYSLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWFKADDSQVKPVSLDNVMSKCAYMLLYARCSPRAPSSVRQAMSDPAHPKQAKQRVVPGGPTWRGGSFNGHQAGQRHSDDAEDDDATHAAFDEYRYAPYSPSDSPSPSESSSLFSNSDAGSHSTDSSESTRNSTSTEEYEYVFGAADQMYRVGGGTPVEGGYPTYSRSRSSLNASSSGREAYSAGTYAEHRTQGGGPGGLWVEGDESPSLLYTDRSKQPSNSTLRDQYRQLDRSDERT

Target ORF information:

RefSeq Version	NM_001326697.1
Organism	Zea mays
Definition	Zea mays ubiquitin carboxyl-terminal hydrolase 17-like (LOC103643160), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001326697.1

ORF Insert Sequence:

ATGGAGGAGG CGGCGGAGTC GTCCTCGGCG GCGGCGGCGG CGGCCCTGGT GCTGGCGCTG 
GTGGCGCTCG TCGTGGTGCC GGCGGTGGCG CTGCTGGTGC GGGGCCGCTG GCGCCGGGCC 
GCGGCGCGGA GGGAGGAGGT GCGCCGCCTC GCGCGGCTGG CTGCCGAGGA GTCCGAGCTG 
GCGGAGCGCG AGTCCGCGCT TGCCTACTAC TCCGAGCTGT TCCCGGGCGT CGTGCACGCC 
GCGGGGGCGC CCGAGTGGGG CCCGCCGCCG GTGGCGGTCC CGGTCCCGGC GCAGGAGGAG 
TTCGACGCGC AGCCGCAGCC GTCCGTGGGG GCAAAGGGGG TCTGTGCGGT GTGCTTCAGG 
CCCACCACGT TCAGGTGCAA GCAGTGCAAG GCCGTCAAGT ACTGTTCCTT CAAATGCCAG 
ATAGCCCACT GGAGACAAGG TCACAAAGAT GAATGCCATC CACCAAGTGT TAATACTAGG 
CCTGATGATG AAGAAGAAAA GGCTGAAGTG GGAAAATCTG CCAAAGAGAA TGCATCAGTT 
GGTGTTAAAC AGGATGCTCA AATGAACAAA CCAGCTGTTG GATCTGAAAC TTCTGATGCA 
AACCATGATT TGAAGAGTTC AAATGGTAAA AGTAAACATA TGCCTTCTGA AGCAGTATGT 
ACCAGTGCAG AGATTCCTGG AGGTCATAAG TCCAACAGCA CAGTTGAAAT TGATCAAAAC 
ATTCAGTCTG TTGACAGTAG TAAGATGGGA TCAAGTATCA AACATGCAAA TTTTGTTGAA 
GATGGTTCTT CCACCGTGGA CTTAAATGAG GCATTGCCAT GTAACTCTCA TTCTTCTTCA 
CCAAACATTA ATGGTCATAG CAGTTTTGTA AACGAAGAAT TCTGCAATCA TTCCAAGGAA 
CACCAAAGAG CTAAGGATGC CAGTGTTGTT GAGGATTGTT CTCAGACAAG CAGTACCAGG 
GAGCTTGAAG ACAGTAGCAT TCCCCACGCA GCTGCATCTG TTGTCTTGGA GTCCAAAAGT 
TCTAGGACTC CTATTCATGT AGAACTTGAG AGGTCTAAAA CAAAATCTGC TGGGAATGAC 
AGCATTCAGA GCACGAAACC TGTGCCATCT GCATTGACTG TTGACAAAGC CACTTCAGTT 
CGTGGGAGTC TTTCTATTAC ACCTAATAAT TCATCTAAAG TAGCAGATAG TCTTCCTGAC 
AGAAGTTTTA AACCTTCAGA TAGGTCAGGC TCAACAACAA ATAACCTTGC AACATCTCTG 
AAGAAAATGG TCAGGCAGCA AACTGCACCA AAAGTTGTGA GGCATTATCC ATCAGAATCG 
ACTCTCTTCC CATATGAACT TTTTGTGAAG CTCTACAGCA AGGTTGAGTT GCACCCTTTT 
GGTCTTCATA ACCTCGGTAA CAGTTGCTAT GCAAATGCTG TTTTTCAGTG TTTGATGTTT 
ACTCGACCAC TCACAACATA TCTTTTGGAA GGGCTTCACT CAAAAAACTG TTCTCAAAAC 
GGATGGTGCT TCATGTGTGA ATTTGAAAAA CTCATTGTGG AGGGCAAACG ACGCAAGATT 
GCCTTGTCAC CGACTGGAAT ACTCTCTCAT TTGAATGACA TTGGCAGTAG CTTTGGTCCT 
GGTAAACAAG AAGATGCTCA TGAATTTCTT AGGTATGCAA TTGATGCTAT GCAATCCGTA 
TGCATGAAGG AAGCTAGAAA AGGAGGTGTT CTTCAGTCAG CGGAAGAAAC AACTCTTGTG 
CAATTGATAT TTGGTGGATA TCTGCGGTCT AAGATCAAGT GCTCAAGGTG CCATGTTAGT 
TCTGAACAGT GTGAGCCCAT GTTGGATCTT ACTGTCGAAA TAGATGGTGA CATTAGTTCG 
CTCGGTGAGG CACTCGTGCG CTTTACATCC ACAGAAGTCT TGGATGGAGA AAACAAATAT 
CACTGCAGCA GATGCAAATC CTATGAGCGT GCTAAAAAGA AGCTGACAAT AGAAGAAGCA 
CCGAATATTC TGACTATTGC ACTGAAAAGA TATCAGTCTG GCAAGTTTGG AAAGATCAGC 
AAAGCCATCA GATTTCCAGA AACCCTCAAC TTGGCTCGCT ATATGAACCC AGATACTGAT 
GACATATCGC CAGTTTACAG CCTCTATGCA GTGGTTGTCC ATCATGATGT CATGAATGCT 
GCCTTCTCTG GCCATTATGT ATGTTATGTT AAAGATACAC AGGGAAAGTG GTTTAAGGCA 
GACGACAGCC AGGTGAAACC TGTATCTCTG GACAATGTCA TGTCAAAGTG TGCTTATATG 
CTGCTGTATG CAAGATGTTC ACCGAGGGCA CCAAGCTCTG TTAGGCAGGC TATGTCGGAC 
CCAGCACACC CGAAGCAGGC CAAGCAGAGG GTGGTTCCAG GAGGACCAAC ATGGCGAGGA 
GGTTCCTTCA ACGGGCACCA AGCTGGCCAG CGGCACAGCG ACGACGCGGA AGACGACGAC 
GCCACACATG CTGCATTTGA CGAATATAGA TACGCACCAT ATTCGCCTTC AGATTCTCCG 
AGCCCTAGCG AGAGTTCATC CCTCTTCAGC AACTCCGACG CAGGGTCGCA CAGCACCGAC 
AGCAGCGAGA GCACGAGGAA CTCGACAAGC ACCGAGGAGT ACGAGTACGT GTTCGGAGCC 
GCTGATCAGA TGTACCGCGT GGGAGGGGGG ACACCTGTGG AGGGTGGCTA TCCGACGTAT 
TCCCGTTCGA GGTCCAGCTT GAATGCCAGC TCATCGGGGC GGGAGGCATA CAGCGCGGGT 
ACCTACGCTG AGCACAGGAC TCAGGGCGGC GGTCCCGGTG GGCTTTGGGT TGAGGGCGAT 
GAGAGCCCGT CCTTGTTATA CACTGACAGA AGTAAACAGC CGTCGAACAG TACGTTAAGA 
GACCAGTATA GGCAGTTAGA TAGGAGCGAT GAGCGAACAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
PLoS genetics5(11)e1000740(2009 Nov)
Soderlund C,Descour A,Kudrna D,Bomhoff M,Boyd L,Currie J,Angelova A,Collura K,Wissotski M,Ashley E,Morrow D,Fernandes J,Walbot V,Yu Y

Insights into corn genes derived from large-scale cDNA sequencing.
Plant molecular biology69(1-2)179-94(2009 Jan)
Alexandrov NN,Brover VV,Freidin S,Troukhan ME,Tatarinova TV,Zhang H,Swaller TJ,Lu YP,Bouck J,Flavell RB,Feldmann KA

Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization.
Plant physiology134(4)1317-26(2004 Apr)
Gardiner J,Schroeder S,Polacco ML,Sanchez-Villeda H,Fang Z,Morgante M,Landewe T,Fengler K,Useche F,Hanafey M,Tingey S,Chou H,Wing R,Soderlund C,Coe EH Jr

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LOC103643160 cDNA ORF clone, Zea mays

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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