Gene Symbol | LOC100501929 |
Entrez Gene ID | 100501929 |
Full Name | resistance to phytophthora 1 |
Gene Type | protein-coding |
Organism | Zea mays |
ORF » Species Summary » Zea mays » LOC100501929 cDNA ORF clone
mRNA | Protein | Name |
---|---|---|
NM_001196567.2 | NP_001183496.2 | uncharacterized protein LOC100501929 |
XM_020539151.2 | XP_020394740.1 | uncharacterized protein LOC100501929 isoform X1 |
XM_020539151.1 | XP_020394740.1 | uncharacterized protein LOC100501929 isoform X1 |
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
Soderlund C, Descour A, Kudrna D, Bomhoff M, Boyd L, Currie J, Angelova A, Collura K, Wissotski M, Ashley E, Morrow D, Fernandes J, Walbot V, Yu Y
PLoS genetics5(11)e1000740(2009 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC100501929 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100501929 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OZa67914 | |
Clone ID Related Accession (Same CDS sequence) | NM_001196567.2 | |
Accession Version | NM_001196567.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 834bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1514390400000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100501929 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DT942200.1 and BT086611.1. On Apr 22, 2016 this sequence version replaced NM_001196567.1. ##Evidence-Data-START## Transcript exon combination :: BT086611.1, SRR3147040.1063.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780084, SAMN00780085 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGGCGG CGGTTTCCAG GGCCATCTGC GTCCAGAAAC CGGGCTCCAA ATGCAGCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001183496.2 |
CDS | 60..893 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCGGCGG CGGTTTCCAG GGCCATCTGC GTCCAGAAAC CGGGCTCCAA ATGCAGCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa62872 | |
Clone ID Related Accession (Same CDS sequence) | XM_020539151.2 , XM_020539151.1 | |
Accession Version | XM_020539151.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2148bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100501929 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024464.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_020539151.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTTTTG GCTCCAGCAG AAGCTGGGCT AGCCGCTACC CAGGATTGCA TTTGCTTCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020394740.1 |
CDS | 758..2905 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCTTTTG GCTCCAGCAG AAGCTGGGCT AGCCGCTACC CAGGATTGCA TTTGCTTCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa62872 | |
Clone ID Related Accession (Same CDS sequence) | XM_020539151.2 , XM_020539151.1 | |
Accession Version | XM_020539151.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2148bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1489852800000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100501929 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024464.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTTTTG GCTCCAGCAG AAGCTGGGCT AGCCGCTACC CAGGATTGCA TTTGCTTCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020394740.1 |
CDS | 758..2905 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCTTTTG GCTCCAGCAG AAGCTGGGCT AGCCGCTACC CAGGATTGCA TTTGCTTCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. |