Gene Symbol | LOC100384848 |
Entrez Gene ID | 100384848 |
Full Name | uncharacterized LOC100384848 |
Synonyms | GRMZM2G049888 |
Gene Type | protein-coding |
Organism | Zea mays |
ORF » Species Summary » Zea mays » LOC100384848 cDNA ORF clone
mRNA | Protein | Name |
---|---|---|
XM_008648482.3 | XP_008646704.1 | uncharacterized protein LOC100384848 isoform X1 |
NM_001177284.2 | NP_001170755.2 | uncharacterized protein LOC100384848 |
XM_008648482.2 | XP_008646704.1 | uncharacterized protein LOC100384848 isoform X1 |
NM_001177284.1 | NP_001170755.1 | uncharacterized protein LOC100384848 |
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
Soderlund C, Descour A, Kudrna D, Bomhoff M, Boyd L, Currie J, Angelova A, Collura K, Wissotski M, Ashley E, Morrow D, Fernandes J, Walbot V, Yu Y
PLoS genetics5(11)e1000740(2009 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC100384848 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100384848 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OZa21220 | |
Clone ID Related Accession (Same CDS sequence) | NM_001177284.1 | |
Accession Version | NM_001177284.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1395bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1492531200000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100384848 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BT084359.2. ##Evidence-Data-START## Transcript is intronless :: BT084359.2 [ECO:0000345] ##Evidence-Data-END## |
1 | ATGCCCGACC CGGGCCTCGT CTCCCGCACC GCCATGGCGC GCGCGCACGC GGCGTCCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001170755.1 |
CDS | 125..1519 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCCCGACC CGGGCCTCGT CTCCCGCACC GCCATGGCGC GCGCGCACGC GGCGTCCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa31199 | |
Clone ID Related Accession (Same CDS sequence) | XM_008648482.3 , NM_001177284.2 , XM_008648482.2 | |
Accession Version | NM_001177284.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1611bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1548691200000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100384848 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from LPUQ01001795.1 and BT084359.2. On Jan 30, 2019 this sequence version replaced NM_001177284.1. ##Evidence-Data-START## Transcript is intronless :: BT084359.2, SRR3147052.14419.1 [ECO:0000345] ##Evidence-Data-END## |
1 | ATGCACCCAC TCACGCTCTC CTCCACCGCG CTCCTCCGCC TAATCAAGTC GCTCTCGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001170755.2 |
CDS | 42..1652 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCACCCAC TCACGCTCTC CTCCACCGCG CTCCTCCGCC TAATCAAGTC GCTCTCGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa31199 | |
Clone ID Related Accession (Same CDS sequence) | XM_008648482.3 , NM_001177284.2 , XM_008648482.2 | |
Accession Version | XM_008648482.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1611bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100384848 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024459.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_008648482.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCACCCAC TCACGCTCTC CTCCACCGCG CTCCTCCGCC TAATCAAGTC GCTCTCGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008646704.1 |
CDS | 98..1708 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCACCCAC TCACGCTCTC CTCCACCGCG CTCCTCCGCC TAATCAAGTC GCTCTCGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa31199 | |
Clone ID Related Accession (Same CDS sequence) | XM_008648482.3 , NM_001177284.2 , XM_008648482.2 | |
Accession Version | XM_008648482.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1611bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1489852800000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100384848 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024459.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008648482.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCACCCAC TCACGCTCTC CTCCACCGCG CTCCTCCGCC TAATCAAGTC GCTCTCGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008646704.1 |
CDS | 226..1836 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCACCCAC TCACGCTCTC CTCCACCGCG CTCCTCCGCC TAATCAAGTC GCTCTCGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. |