Gene Symbol | pco115996 |
Entrez Gene ID | 100279888 |
Full Name | uncharacterized LOC100279888 |
Gene Type | protein-coding |
Organism | Zea mays |
ORF » Species Summary » Zea mays » pco115996 cDNA ORF clone
mRNA | Protein | Name |
---|---|---|
XM_020551505.1 | XP_020407094.1 | uncharacterized protein LOC100279888 isoform X2 |
XM_020551504.1 | XP_020407093.1 | uncharacterized protein LOC100279888 isoform X1 |
NM_001317848.1 | NP_001304777.1 | uncharacterized protein LOC100279888 |
XM_020551504.2 | XP_020407093.1 | uncharacterized protein LOC100279888 isoform X1 |
Endosperm-preferred expression of maize genes as revealed by transcriptome-wide analysis of expressed sequence tags.
Verza NC, E Silva TR, Neto GC, Nogueira FT, Fisch PH, de Rosa VE Jr, Rebello MM, Vettore AL, da Silva FR, Arruda P
Plant molecular biology59(2)363-74(2005 Sep)
Characterization of the maize endosperm transcriptome and its comparison to the rice genome.
Lai J, Dey N, Kim CS, Bharti AK, Rudd S, Mayer KF, Larkins BA, Becraft P, Messing J
Genome research14(10A)1932-7(2004 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following pco115996 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the pco115996 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OZa67407 | |
Clone ID Related Accession (Same CDS sequence) | NM_001317848.1 | |
Accession Version | NM_001317848.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1632bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1556121600000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100279888 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CO468301.1, AY104064.1, DV550353.1 and BT055064.1. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN00780084, SAMN00780086 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAAGAAGA CCCTCGTCTT CCACCGCGGT CGTGCCCCCA AGGGCGAGCG CACGGGGTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001304777.1 |
CDS | 75..1706 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAGAAGA CCCTCGTCTT CCACCGCGGT CGTGCCCCCA AGGGCGAGCG CACGGGGTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa60077 | |
Clone ID Related Accession (Same CDS sequence) | XM_020551504.1 , XM_020551504.2 | |
Accession Version | XM_020551504.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1986bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1489852800000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100279888 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024462.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGGAGA TGTCTGTGGT GGAGCTCAGG ACGCTGCCGC TCGGCTTCCG CTTCCACCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020407093.1 |
CDS | 176..2161 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGTGGAGA TGTCTGTGGT GGAGCTCAGG ACGCTGCCGC TCGGCTTCCG CTTCCACCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa60077 | |
Clone ID Related Accession (Same CDS sequence) | XM_020551504.1 , XM_020551504.2 | |
Accession Version | XM_020551504.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1986bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100279888 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024462.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_020551504.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGGAGA TGTCTGTGGT GGAGCTCAGG ACGCTGCCGC TCGGCTTCCG CTTCCACCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020407093.1 |
CDS | 160..2145 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTGGAGA TGTCTGTGGT GGAGCTCAGG ACGCTGCCGC TCGGCTTCCG CTTCCACCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa60078 | |
Clone ID Related Accession (Same CDS sequence) | XM_020551505.1 | |
Accession Version | XM_020551505.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1983bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100279888 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024462.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGGAGA TGTCTGTGGT GGAGCTCAGG ACGCTGCCGC TCGGCTTCCG CTTCCACCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020407094.1 |
CDS | 196..2178 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTGGAGA TGTCTGTGGT GGAGCTCAGG ACGCTGCCGC TCGGCTTCCG CTTCCACCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Endosperm-preferred expression of maize genes as revealed by transcriptome-wide analysis of expressed sequence tags. |
Characterization of the maize endosperm transcriptome and its comparison to the rice genome. |