Gene Symbol | LOC100279001 |
Entrez Gene ID | 100279001 |
Full Name | uncharacterized LOC100279001 |
Synonyms | GRMZM2G330024 |
Gene Type | protein-coding |
Organism | Zea mays |
ORF » Species Summary » Zea mays » LOC100279001 cDNA ORF clone
mRNA | Protein | Name |
---|---|---|
XM_020538896.1 | XP_020394485.1 | uncharacterized protein LOC100279001 isoform X2 |
NM_001152077.3 | NP_001145549.3 | uncharacterized protein LOC100279001 |
XM_020538895.1 | XP_020394484.1 | uncharacterized protein LOC100279001 isoform X1 |
XM_020538897.1 | XP_020394486.1 | uncharacterized protein LOC100279001 isoform X3 |
Characterization of the maize endosperm transcriptome and its comparison to the rice genome.
Lai J, Dey N, Kim CS, Bharti AK, Rudd S, Mayer KF, Larkins BA, Becraft P, Messing J
Genome research14(10A)1932-7(2004 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC100279001 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100279001 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OZa68008 | |
Clone ID Related Accession (Same CDS sequence) | NM_001152077.3 | |
Accession Version | NM_001152077.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1212bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1548950400000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100279001 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from FL103468.1, FM188864.1 and EU940958.1. On Dec 10, 2015 this sequence version replaced NM_001152077.2. ##Evidence-Data-START## Transcript exon combination :: EU940958.1, SRR3147047.8652.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01096209 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCGATGTG ATACAATATT GAACCGTATT TTTGTTTGCT CGAGCTGTAA GGCTACTGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001145549.3 |
CDS | 73..1284 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCGATGTG ATACAATATT GAACCGTATT TTTGTTTGCT CGAGCTGTAA GGCTACTGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa62764 | |
Clone ID Related Accession (Same CDS sequence) | XM_020538897.1 | |
Accession Version | XM_020538897.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1656bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100279001 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024464.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCGTCT TGTATCTTGC AGAAGATTTG ATACTCAAGG TTGTCCAGAA TATTTCTTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020394486.1 |
CDS | 1511..3166 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCCGTCT TGTATCTTGC AGAAGATTTG ATACTCAAGG TTGTCCAGAA TATTTCTTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa62762 | |
Clone ID Related Accession (Same CDS sequence) | XM_020538895.1 | |
Accession Version | XM_020538895.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3489bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100279001 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024464.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGGAAG TGATTGTGCA GCAAGAGGAG CAGCCGGTTG AAATCGCTTT AGATCAAAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020394484.1 |
CDS | 824..4312 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCAGGAAG TGATTGTGCA GCAAGAGGAG CAGCCGGTTG AAATCGCTTT AGATCAAAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa62763 | |
Clone ID Related Accession (Same CDS sequence) | XM_020538896.1 | |
Accession Version | XM_020538896.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3420bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100279001 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024464.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGGAAG TGATTGTGCA GCAAGAGGAG CAGCCGGTTG AAATCGCTTT AGATCAAAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020394485.1 |
CDS | 815..4234 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCAGGAAG TGATTGTGCA GCAAGAGGAG CAGCCGGTTG AAATCGCTTT AGATCAAAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Characterization of the maize endosperm transcriptome and its comparison to the rice genome. |