Gene Symbol | LOC100275628 |
Entrez Gene ID | 100275628 |
Full Name | Arginine decarboxylase |
Synonyms | GRMZM2G100920 |
Gene Type | protein-coding |
Organism | Zea mays |
ORF » Species Summary » Zea mays » LOC100275628 cDNA ORF clone
mRNA | Protein | Name |
---|---|---|
XM_008671538.2 | XP_008669760.1 | uncharacterized protein LOC100275628 isoform X1 |
NM_001365614.1 | NP_001352543.1 | uncharacterized protein LOC100275628 isoform 1 |
NM_001165500.2 | NP_001158972.2 | uncharacterized protein LOC100275628 isoform 1 |
XM_008671540.2 | XP_008669762.1 | uncharacterized protein LOC100275628 isoform X1 |
NM_001149675.1 | NP_001143147.1 | uncharacterized protein LOC100275628 isoform 2 |
Insights into corn genes derived from large-scale cDNA sequencing.
Alexandrov NN, Brover VV, Freidin S, Troukhan ME, Tatarinova TV, Zhang H, Swaller TJ, Lu YP, Bouck J, Flavell RB, Feldmann KA
Plant molecular biology69(1-2)179-94(2009 Jan)
Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization.
Gardiner J, Schroeder S, Polacco ML, Sanchez-Villeda H, Fang Z, Morgante M, Landewe T, Fengler K, Useche F, Hanafey M, Tingey S, Chou H, Wing R, Soderlund C, Coe EH Jr
Plant physiology134(4)1317-26(2004 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC100275628 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100275628 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OZa20407 | |
Clone ID Related Accession (Same CDS sequence) | NM_001149675.1 | |
Accession Version | NM_001149675.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1179bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1490976000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100275628 isoform 2 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EU957236.1. ##Evidence-Data-START## Transcript exon combination :: EU957236.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780142, SAMN00780157 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTACCT GTTCTCCCGG CGACTACCTC ATTGTGCCAC GGAACTGCCA CATTTCAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001143147.1 |
CDS | 531..1709 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCTACCT GTTCTCCCGG CGACTACCTC ATTGTGCCAC GGAACTGCCA CATTTCAGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa26416 | |
Clone ID Related Accession (Same CDS sequence) | XM_008671538.2 , NM_001365614.1 , NM_001165500.2 , XM_008671540.2 | |
Accession Version | NM_001365614.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1626bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1553097600000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100275628 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DR787025.1, AY109103.1 and CO519391.1. Transcript Variant: This variant (1) has one intron. ##Evidence-Data-START## Transcript exon combination :: SRR3147053.13303.1, SRR3147023.1842.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01096209, SAMN08026697 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTCGCT GCGTTGCCGG CAGCTGCCCT CCCGTCACCT TCGCGTGTTG CCCCCGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001352543.1 |
CDS | 46..1671 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCTCGCT GCGTTGCCGG CAGCTGCCCT CCCGTCACCT TCGCGTGTTG CCCCCGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa26416 | |
Clone ID Related Accession (Same CDS sequence) | XM_008671538.2 , NM_001365614.1 , NM_001165500.2 , XM_008671540.2 | |
Accession Version | NM_001165500.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1626bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1514390400000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100275628 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DR787025.1 and AY109103.1. On or before Nov 3, 2016 this sequence version replaced XM_008671534.1, NM_001165500.1. ##Evidence-Data-START## Transcript exon combination :: AY109103.1, SRR3147023.8168.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN08026697, SAMN08026701 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTCGCT GCGTTGCCGG CAGCTGCCCT CCCGTCACCT TCGCGTGTTG CCCCCGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001158972.2 |
CDS | 46..1671 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCGCT GCGTTGCCGG CAGCTGCCCT CCCGTCACCT TCGCGTGTTG CCCCCGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa26416 | |
Clone ID Related Accession (Same CDS sequence) | XM_008671538.2 , NM_001365614.1 , NM_001165500.2 , XM_008671540.2 | |
Accession Version | XM_008671538.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1626bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100275628 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024459.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008671538.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCGCT GCGTTGCCGG CAGCTGCCCT CCCGTCACCT TCGCGTGTTG CCCCCGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008669760.1 |
CDS | 107..1732 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCGCT GCGTTGCCGG CAGCTGCCCT CCCGTCACCT TCGCGTGTTG CCCCCGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa26416 | |
Clone ID Related Accession (Same CDS sequence) | XM_008671538.2 , NM_001365614.1 , NM_001165500.2 , XM_008671540.2 | |
Accession Version | XM_008671540.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1626bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100275628 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024459.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008671540.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCGCT GCGTTGCCGG CAGCTGCCCT CCCGTCACCT TCGCGTGTTG CCCCCGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008669762.1 |
CDS | 111..1736 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCGCT GCGTTGCCGG CAGCTGCCCT CCCGTCACCT TCGCGTGTTG CCCCCGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Insights into corn genes derived from large-scale cDNA sequencing. |
Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization. |