Gene Symbol | LOC100191474 |
Entrez Gene ID | 100191474 |
Full Name | topoisomerase I |
Synonyms | GRMZM2G092451 |
Gene Type | protein-coding |
Organism | Zea mays |
ORF » Species Summary » Zea mays » LOC100191474 cDNA ORF clone
mRNA | Protein | Name |
---|---|---|
XM_020551257.2 | XP_020406846.1 | topoisomerase I isoform X1 |
XM_020551257.1 | XP_020406846.1 | topoisomerase I isoform X1 |
NM_001164334.2 | NP_001157806.2 | topoisomerase I |
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
Soderlund C, Descour A, Kudrna D, Bomhoff M, Boyd L, Currie J, Angelova A, Collura K, Wissotski M, Ashley E, Morrow D, Fernandes J, Walbot V, Yu Y
PLoS genetics5(11)e1000740(2009 Nov)
Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization.
Gardiner J, Schroeder S, Polacco ML, Sanchez-Villeda H, Fang Z, Morgante M, Landewe T, Fengler K, Useche F, Hanafey M, Tingey S, Chou H, Wing R, Soderlund C, Coe EH Jr
Plant physiology134(4)1317-26(2004 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC100191474 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100191474 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OZa54077 | |
Clone ID Related Accession (Same CDS sequence) | XM_020551257.2 , XM_020551257.1 , NM_001164334.2 | |
Accession Version | NM_001164334.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2715bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1552147200000 | |
Organism | Zea mays | |
Product | topoisomerase I | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from LPUQ01000805.1 and BT053789.1. On Feb 12, 2017 this sequence version replaced NM_001164334.1. ##Evidence-Data-START## Transcript exon combination :: GQ181129.1, SRR3147024.12015.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01096209 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTGTTG TCAACCCAAC CAACCTTGCT ATTGACGACG ATGACGACGA TACTCCCATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001157806.2 |
CDS | 223..2937 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTGTTG TCAACCCAAC CAACCTTGCT ATTGACGACG ATGACGACGA TACTCCCATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa54077 | |
Clone ID Related Accession (Same CDS sequence) | XM_020551257.2 , XM_020551257.1 , NM_001164334.2 | |
Accession Version | XM_020551257.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2715bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | topoisomerase I isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024462.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_020551257.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGTTG TCAACCCAAC CAACCTTGCT ATTGACGACG ATGACGACGA TACTCCCATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020406846.1 |
CDS | 239..2953 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTGTTG TCAACCCAAC CAACCTTGCT ATTGACGACG ATGACGACGA TACTCCCATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa54077 | |
Clone ID Related Accession (Same CDS sequence) | XM_020551257.2 , XM_020551257.1 , NM_001164334.2 | |
Accession Version | XM_020551257.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2715bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1489852800000 | |
Organism | Zea mays | |
Product | topoisomerase I isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024462.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGTTG TCAACCCAAC CAACCTTGCT ATTGACGACG ATGACGACGA TACTCCCATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020406846.1 |
CDS | 240..2954 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTGTTG TCAACCCAAC CAACCTTGCT ATTGACGACG ATGACGACGA TACTCCCATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. |
Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization. |