LINJ_29_2810 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_29_2810
Entrez Gene ID	5070838
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001466760.1	XP_001466797.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_29_2810 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_29_2810 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc04362	XM_001466760.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_29_2810 ( XM_001466760.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001466797.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

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CloneID	OLc04362
Clone ID Related Accession (Same CDS sequence)	XM_001466760.1
Accession Version	XM_001466760.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2979bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009413). COMPLETENESS: incomplete on both ends.

ATGTGGTTCT CGAAGGCCCG GCGAGCTTTT TGCCTTTCGG TGTGCCGGCG GTCTTCAGCG 
TTCCTCGAAC TCTACGGCCG TGCGCGTTCG ACAGCAGTGG CTGAGGCGCC GTCGGCACCG 
CAACCATCGT GCAGCACTGC GCCTGCGGAT GGGGAGTGGG AAAGGTGCCA GGCGCTGCTG 
CAGCGCTTTC AGTCACACGT GTACATCTAC CCAGGCCACG TGCCAGTGCA GCTATGCAGA 
GAGACGCTAA CGGGCATCGA ACAGGTGCTC GCGTCATCGC CGGCGCGCTG CTCCGCCGCG 
GCCCGCAGGC TCTGGAGGGA CGCGCTCGCT CTGCATTCGC ACTTGCCGAA GCATGACATT 
AGGGCAGCGG CCGACGCGGC GAGCGTGCTG CTGTTTTCCG ACCAAGCCCA GCTTGGCTGC 
CGTGTGTGCT CGCAGGCTGC TAGCCATCCC CAGTTCCTTC AAGCACTCCG CAGCGAGGCG 
GAGCTTACGG GCTGCCTGCG TCTTCTCAGC GTGCATTCCA TGTGCGCGTG CGACTCACGT 
GCGGCTTTCT CCGCTCACTG GGCGGCCGTC CTCGCTGACT CCCTGGACGA GGCGAAGCAT 
GTCATCGCCG CGGCGGATAA GTCCAGGCGG GCACCCATGG CACACGCAAT GGAGGTGCTG 
GCGTGGTCGC TAGACTGGCT GCATCACGAC AGTGGCACGT CAGACAGAGA GGCACTCAAG 
GCCCTGAAAA CGAAGCTTCC TCGGTGGCTT CCGTTTCTCT TTGACGAGTT TGACGCCGCC 
GCCGCGAAGC CGTCGTCGCA GTCTCTGGCG CTTTTGCCGC CGCGTTGGCT GCTCACGATG 
GCCACGCACG CGGAGAGCGA CAGCGACGCT GCAACTCTGG AAAGGCTGCT GCGCCACGCG 
TTGGGCAGAG AGGAGCAGTA CCATGGCTAC GCCGTGTTTC AGCTCTCCTC TCGCGTCGCC 
AGTCTCCTCG TGCGCCGCTT CCCCCACCAC CCGAGCGCCG CTCATGCGGT CGCTGCGCTT 
GGCACCGCCT TGCAGTGCTC GTCACTGATC CCGTACGGTA CAACGCAAGA GGGCTTTGAC 
AAGGCCCTTG GAGTGCTTAC CCGCATGTCT GGGGCGCAGC CTTATTTTGC CATGCAGGAG 
CTGCTGCGCA GCCACTCGGC AGAGATGGCG GCAAAAATAC AAGAACAGCA CGGCGACCGA 
CTCACTGGAA ACGCTGACCT CAACTGGAGC ACGGCCCTCA CCTTTACAAT GCGGCAGGTG 
GAGGCGGCCG ACCCTCACTG GCGCGTGTAT CTCCCAGAGA CGCTGCGGCT TCTCAGCGAT 
GCTGGCAAGT CGAAGCAGTT TTGGAGTCTC CTGCAAGAAT ACAACGCAGC GGACGCAAGC 
GCCAACATCT CCGTGGCGGC GTCGCTGAGC CGCGCGATGC AGCTTAGTGG GAGATGGTGG 
CACGCGGTGG AGGTGTTGGA CTTGCTCGCC GGCGCGCTAC CTCCCCGGGA CACCACTGAG 
GAGCAGTTGA TGACGACTGC GTGCGCCGAG ACACTGCGGG TGCTGTTGCA GGCGAAACGG 
TGGAAAGAAG CGCTGCGTGT GTTCCTGCTG GTGGGCGATG CTCTTCCGCC GACGGAATCC 
GCCGTCGTCT CCAGGTTGCT CACGTCGATG TCGATGTCGG CCCCTTGGAG AGCGGCGCTG 
GCTGCAGCGG CAGAGAAGGG ACTGGCTTCC GACACCACTC GGATCATTCT GCGCTGCTTG 
CATGCCGGCG CATCGGCAGC CTTCCTGTCA CACTATCACC AACAGAAGAT GGCTGCGCCC 
ATCTTTGCTC AACACGGTCG GTGGGATCTT GCGCGCACCC TTGTTGAGCA GCGTCCCAGC 
GACGTGTCAC TGTGGCGTGC CCTTGTGCAG GCAATGGAGC ACTGCGCAGA CGCTGTGGAT 
GAGCCGACGG CTGCCACCGT TTTCCGTGTG CCGCTTCCGC AAGGCCATTG GGATGACATG 
CCGTTTGTGA ACGCGTTCGC GCGTCTCTGT GTGCAGCGAG GCTGGCTGTC CCTCCTTTCG 
TCGCACCTGT CCTGCCTTCT TGCACCACGA GTCTCCCCTG CCTCGCCGGT GTCGGGCCTT 
CGAGTGGAGT ACGAACACCT CCTTCGCTTT CTCCAGTCGA ATCGCTTGCC CCCAGCCCAG 
TTTGCCTTTA CCAACTCGTA CGTTGTCCAC CAGTTCATGT CGTGTGTGAC GAGCCGACGC 
GTGTCTGTGG TGGCGAAACT ACCGGCGGCG TCTGCGAGCA CTAAGCGGCA AGCCTCCACC 
CATCTGCGCG TCCCTTACGA GAACCTGAGT GCGCCGCGCC TAGAGGGCGA CGGTACTGCA 
ACCGTGCGGG CGACATCCGC TCGCGCTACC ACGTGCCTCA AGGAGCACTG CGTTTTCAGC 
AGTGCTAGCG GCCTTATAGT CGGTTACAAA GTCCCTGCAT CCGCTCTCTT TGCGTCTGCG 
AGTGGGCTCC TGAAGGTTCT GGGCAACAGC GGAGTGTACT GTCTCGCGTA TCACATGTCA 
GTCGCGAGCA GTGGCCTTTT TCTGCTCTAT CCGGCCTCTG CCAGTCTAAC GTGGTACTCC 
GTGAAGCTGC GCGTGCGCCT CTGCGTGGCA GTGGTGCCAG CAGCGCCATA CGTGCCGCTG 
CTAGCAACAT CGTTCTTCGA CCGCTATGCG ATGAGGTGGC GCAGCGGTGA GGGCGATCGC 
CACGAGGTGG AGGCTCTCTT GGTTGCTGCG AGTGGGCAAG AGGTGCCGCG CGCGTGGCGG 
TCTCTCAAGA TGGATCTGAA CGCGGAGGGC TGGGGACCGG TCGAACCCGA GGCAGGTGCC 
GGGGACATGT ATCACATCCT GGAGCTCCAG GTCTCACGCC GCGCGCCGAC CAATGAGGGC 
GATGCGATAC CAGCAGACGT GGAGGTGTTC GCGTGTCGCG AGCGTTCACT GAAACCCCTG 
GGCGCGGACG CTAGCGAGGC GGCGGAGTGG GGTTTGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001466797.1
CDS	1..2979
Translation	MWFSKARRAFCLSVCRRSSAFLELYGRARSTAVAEAPSAPQPSCSTAPADGEWERCQALLQRFQSHVYIYPGHVPVQLCRETLTGIEQVLASSPARCSAAARRLWRDALALHSHLPKHDIRAAADAASVLLFSDQAQLGCRVCSQAASHPQFLQALRSEAELTGCLRLLSVHSMCACDSRAAFSAHWAAVLADSLDEAKHVIAAADKSRRAPMAHAMEVLAWSLDWLHHDSGTSDREALKALKTKLPRWLPFLFDEFDAAAAKPSSQSLALLPPRWLLTMATHAESDSDAATLERLLRHALGREEQYHGYAVFQLSSRVASLLVRRFPHHPSAAHAVAALGTALQCSSLIPYGTTQEGFDKALGVLTRMSGAQPYFAMQELLRSHSAEMAAKIQEQHGDRLTGNADLNWSTALTFTMRQVEAADPHWRVYLPETLRLLSDAGKSKQFWSLLQEYNAADASANISVAASLSRAMQLSGRWWHAVEVLDLLAGALPPRDTTEEQLMTTACAETLRVLLQAKRWKEALRVFLLVGDALPPTESAVVSRLLTSMSMSAPWRAALAAAAEKGLASDTTRIILRCLHAGASAAFLSHYHQQKMAAPIFAQHGRWDLARTLVEQRPSDVSLWRALVQAMEHCADAVDEPTAATVFRVPLPQGHWDDMPFVNAFARLCVQRGWLSLLSSHLSCLLAPRVSPASPVSGLRVEYEHLLRFLQSNRLPPAQFAFTNSYVVHQFMSCVTSRRVSVVAKLPAASASTKRQASTHLRVPYENLSAPRLEGDGTATVRATSARATTCLKEHCVFSSASGLIVGYKVPASALFASASGLLKVLGNSGVYCLAYHMSVASSGLFLLYPASASLTWYSVKLRVRLCVAVVPAAPYVPLLATSFFDRYAMRWRSGEGDRHEVEALLVAASGQEVPRAWRSLKMDLNAEGWGPVEPEAGAGDMYHILELQVSRRAPTNEGDAIPADVEVFACRERSLKPLGADASEAAEWGL

Target ORF information:

RefSeq Version	XM_001466760.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001466760.1

ORF Insert Sequence:

ATGTGGTTCT CGAAGGCCCG GCGAGCTTTT TGCCTTTCGG TGTGCCGGCG GTCTTCAGCG 
TTCCTCGAAC TCTACGGCCG TGCGCGTTCG ACAGCAGTGG CTGAGGCGCC GTCGGCACCG 
CAACCATCGT GCAGCACTGC GCCTGCGGAT GGGGAGTGGG AAAGGTGCCA GGCGCTGCTG 
CAGCGCTTTC AGTCACACGT GTACATCTAC CCAGGCCACG TGCCAGTGCA GCTATGCAGA 
GAGACGCTAA CGGGCATCGA ACAGGTGCTC GCGTCATCGC CGGCGCGCTG CTCCGCCGCG 
GCCCGCAGGC TCTGGAGGGA CGCGCTCGCT CTGCATTCGC ACTTGCCGAA GCATGACATT 
AGGGCAGCGG CCGACGCGGC GAGCGTGCTG CTGTTTTCCG ACCAAGCCCA GCTTGGCTGC 
CGTGTGTGCT CGCAGGCTGC TAGCCATCCC CAGTTCCTTC AAGCACTCCG CAGCGAGGCG 
GAGCTTACGG GCTGCCTGCG TCTTCTCAGC GTGCATTCCA TGTGCGCGTG CGACTCACGT 
GCGGCTTTCT CCGCTCACTG GGCGGCCGTC CTCGCTGACT CCCTGGACGA GGCGAAGCAT 
GTCATCGCCG CGGCGGATAA GTCCAGGCGG GCACCCATGG CACACGCAAT GGAGGTGCTG 
GCGTGGTCGC TAGACTGGCT GCATCACGAC AGTGGCACGT CAGACAGAGA GGCACTCAAG 
GCCCTGAAAA CGAAGCTTCC TCGGTGGCTT CCGTTTCTCT TTGACGAGTT TGACGCCGCC 
GCCGCGAAGC CGTCGTCGCA GTCTCTGGCG CTTTTGCCGC CGCGTTGGCT GCTCACGATG 
GCCACGCACG CGGAGAGCGA CAGCGACGCT GCAACTCTGG AAAGGCTGCT GCGCCACGCG 
TTGGGCAGAG AGGAGCAGTA CCATGGCTAC GCCGTGTTTC AGCTCTCCTC TCGCGTCGCC 
AGTCTCCTCG TGCGCCGCTT CCCCCACCAC CCGAGCGCCG CTCATGCGGT CGCTGCGCTT 
GGCACCGCCT TGCAGTGCTC GTCACTGATC CCGTACGGTA CAACGCAAGA GGGCTTTGAC 
AAGGCCCTTG GAGTGCTTAC CCGCATGTCT GGGGCGCAGC CTTATTTTGC CATGCAGGAG 
CTGCTGCGCA GCCACTCGGC AGAGATGGCG GCAAAAATAC AAGAACAGCA CGGCGACCGA 
CTCACTGGAA ACGCTGACCT CAACTGGAGC ACGGCCCTCA CCTTTACAAT GCGGCAGGTG 
GAGGCGGCCG ACCCTCACTG GCGCGTGTAT CTCCCAGAGA CGCTGCGGCT TCTCAGCGAT 
GCTGGCAAGT CGAAGCAGTT TTGGAGTCTC CTGCAAGAAT ACAACGCAGC GGACGCAAGC 
GCCAACATCT CCGTGGCGGC GTCGCTGAGC CGCGCGATGC AGCTTAGTGG GAGATGGTGG 
CACGCGGTGG AGGTGTTGGA CTTGCTCGCC GGCGCGCTAC CTCCCCGGGA CACCACTGAG 
GAGCAGTTGA TGACGACTGC GTGCGCCGAG ACACTGCGGG TGCTGTTGCA GGCGAAACGG 
TGGAAAGAAG CGCTGCGTGT GTTCCTGCTG GTGGGCGATG CTCTTCCGCC GACGGAATCC 
GCCGTCGTCT CCAGGTTGCT CACGTCGATG TCGATGTCGG CCCCTTGGAG AGCGGCGCTG 
GCTGCAGCGG CAGAGAAGGG ACTGGCTTCC GACACCACTC GGATCATTCT GCGCTGCTTG 
CATGCCGGCG CATCGGCAGC CTTCCTGTCA CACTATCACC AACAGAAGAT GGCTGCGCCC 
ATCTTTGCTC AACACGGTCG GTGGGATCTT GCGCGCACCC TTGTTGAGCA GCGTCCCAGC 
GACGTGTCAC TGTGGCGTGC CCTTGTGCAG GCAATGGAGC ACTGCGCAGA CGCTGTGGAT 
GAGCCGACGG CTGCCACCGT TTTCCGTGTG CCGCTTCCGC AAGGCCATTG GGATGACATG 
CCGTTTGTGA ACGCGTTCGC GCGTCTCTGT GTGCAGCGAG GCTGGCTGTC CCTCCTTTCG 
TCGCACCTGT CCTGCCTTCT TGCACCACGA GTCTCCCCTG CCTCGCCGGT GTCGGGCCTT 
CGAGTGGAGT ACGAACACCT CCTTCGCTTT CTCCAGTCGA ATCGCTTGCC CCCAGCCCAG 
TTTGCCTTTA CCAACTCGTA CGTTGTCCAC CAGTTCATGT CGTGTGTGAC GAGCCGACGC 
GTGTCTGTGG TGGCGAAACT ACCGGCGGCG TCTGCGAGCA CTAAGCGGCA AGCCTCCACC 
CATCTGCGCG TCCCTTACGA GAACCTGAGT GCGCCGCGCC TAGAGGGCGA CGGTACTGCA 
ACCGTGCGGG CGACATCCGC TCGCGCTACC ACGTGCCTCA AGGAGCACTG CGTTTTCAGC 
AGTGCTAGCG GCCTTATAGT CGGTTACAAA GTCCCTGCAT CCGCTCTCTT TGCGTCTGCG 
AGTGGGCTCC TGAAGGTTCT GGGCAACAGC GGAGTGTACT GTCTCGCGTA TCACATGTCA 
GTCGCGAGCA GTGGCCTTTT TCTGCTCTAT CCGGCCTCTG CCAGTCTAAC GTGGTACTCC 
GTGAAGCTGC GCGTGCGCCT CTGCGTGGCA GTGGTGCCAG CAGCGCCATA CGTGCCGCTG 
CTAGCAACAT CGTTCTTCGA CCGCTATGCG ATGAGGTGGC GCAGCGGTGA GGGCGATCGC 
CACGAGGTGG AGGCTCTCTT GGTTGCTGCG AGTGGGCAAG AGGTGCCGCG CGCGTGGCGG 
TCTCTCAAGA TGGATCTGAA CGCGGAGGGC TGGGGACCGG TCGAACCCGA GGCAGGTGCC 
GGGGACATGT ATCACATCCT GGAGCTCCAG GTCTCACGCC GCGCGCCGAC CAATGAGGGC 
GATGCGATAC CAGCAGACGT GGAGGTGTTC GCGTGTCGCG AGCGTTCACT GAAACCCCTG 
GGCGCGGACG CTAGCGAGGC GGCGGAGTGG GGTTTGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_29_2810 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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