LINJ_27_2060 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_27_2060
Entrez Gene ID	5070156
Full Name	hypothetical protein, unknown function
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001466406.2	XP_001466443.2	hypothetical protein, unknown function

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_27_2060 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_27_2060 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc03746	XM_001466406.2 Latest version!	Leishmania infantum JPCM5 hypothetical protein, unknown function partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_27_2060 ( XM_001466406.2 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001466443.2 Leishmania infantum JPCM5 hypothetical protein, unknown function partial mRNA.

Price & Availability↑

CloneID	OLc03746
Clone ID Related Accession (Same CDS sequence)	XM_001466406.2
Accession Version	XM_001466406.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3360bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	hypothetical protein, unknown function
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009411). On Jul 14, 2011 this sequence version replaced XM_001466406.1. COMPLETENESS: incomplete on both ends.

ATGTGCATCT CTTCGTTGGT GTCTCTCCTA CTCTTCTCTC GTTTCGAATT CGTTTGTGTG 
CTCTTGTCTT GCCTTCATCT CTTTGGTGGC CGGCGCGTCT CCCTTTTCCT TCACGCCCCC 
ACCATCATCT TCGTGTGCAC TCCTGCTCAG CTCTTCTATT GCCGCTGCAG TGTGTGCGTG 
TGTGTGTACG TGTGGAAGGG AGGGGGTCTG TCTCTTCCCG CCAATCGCCT CCCACCACCC 
GCCGCCAGAG ACGCGCTCGT ATTTGCGATA CAACCTCGAC CCCCCCCCCC CCCAGCCGTT 
CTTGCGCTTC TTCCCTGCTC TGAAACGGTG CGTGTGCCCT CCGAAGCTAC GGTGGCGCTG 
GTGTCGAAGC ACGAAGAGGC CGGCACCGTC GCTGCTGTCT CGCCTTCGAT ACCGTCGTCT 
CTCTCAGTCG CGTCATCAAG TCACAAGGAG ATGCGAGAGG AACCGCGGCG GCGCCGAGCC 
GAGGTCGCCG AAGACGTGCG CGTTCAGCAA CATCGAGCCA CGTCGGTGCC CACGTCCCCG 
CTGACGCCGC CGCTTCTGCT CCAGCGGAAT CGAGAGGTAG TGGCGCTGGG CAACTACACA 
TCGAGAGGGG TCGAGGGGTC TGACGAAGGC AGCGTGAGCA CGACCGTCAC CTCCAACGTG 
ACTGACCGTT CTGGGCCCGC TGGAAACTGC AAGAGCGGAA CTCCCCACTC CAGCAGCTCC 
CGCGTACTGG ACTTGACGCC ATTTGCTGAG AGCGCCGAGG ACGACCGGGA CGACCGCGGG 
AGCAAGTGGG ACCGCACCGC CGCTTTCGGC ATCCCCGCGC CAGCGACCTT GCGCATATCG 
ACCTACCGCA CGACCGCTGA CATCACTACC GATCGCACGA GGAACAGCAA AAACAGCAGC 
AGCACTTGCT TGCATCTTGG AGATGCGTGG CAGGAGCGGG AGAAGAGCTC GCCAGATGCA 
AACACAGCTG CGATCCCCAC AGCGGGAATG ACGCCGCCTT TCTCAATCTC TCTCTCGTCC 
GACTCGTTGT CGTGCGCTAT GCCGAGCGTG AGGAGATCCT CCCCCGAGCT GGTGAGACGC 
GGGAACGGCA CGACACGACA GCTCTCTCGC AAGTGTCTAC GGAACGCAAA TTCGGCGTGC 
GGTGATAGCG GTCGCTGCAC TGGACCTGTG GCGCGCACCA CTACGCCGAC GACGGCACCG 
TCTACCGCCC TTCTCTCTTC CTCTTACGTG GCCTGCTTCC AGGGCCACAA CGCCATGCCC 
ATCAGTGACA AGGACGGGGA CAGCTCGCTG CGTCTCCGTC CGCGCCGATG CCGCGGCGGC 
AGCAGCTGCG GCTCGTACGA GCACTGGACC ATGAAGCCGC GACTTAGCGG CGTCAACGAG 
GTTCTGCTAC AGAGTGCATC TGCATCCGGC GAGCCTCAGC TATTCCGCCA GGCGCTCGCT 
GCCTTTCAGC TGTGGGACAC CCTACTGCGC CTGGAGCTGC ACAGCAACAG CGCAGGCGGC 
ACGTACATGG TGCGGCTTGC AAGGCCGTCG TCCTCATCGG CGACGGCGAC TTTCGCGGCG 
ACCGACAGCG ACAGCCATGG CGCCGTGGTG GCTGTGTTCA AGCCATGCGA CGAGGAAATC 
GGCCAGGAGA GCAACCCACA CGCGAATCGT GAAAGCGACC GCACGGAGAC GTTTGCCCCC 
GGCAGCGGCA GCCGGCGTGA GGTGCTCGCG TACCTCCTCG ATCACGGACA CAACGCCGGG 
GTGCCGCCGA CGCTGGAGGT GGCATCGACC TACTGGGCCG GGGTGGGTGC GACAACAGCC 
AACAGCAACG GGGGTGGTGG TGCTGCTACC GCGAGCTTGT CCACAGGCAC ACTGGGCGCG 
GTGGCAGGAG GTGGAGATGC CCCTGCGAAC AGCGGCCTTC GGAGTTCACG CACGGGTGGG 
ACAGACTGGA GAGGTATCGG CGCTGACGAT GGCGACAGCG TTGCCGCTCG AGTGGCAGCA 
TCTACGCACC TCCGGATCGG CAGCTTGCAG CTTTTCGTGC CTGGCTGTGA AGAGGCCGCG 
GACGTTCTCC CCGGCCACTT CGACGTCGAC GAGGTGCACG CGCTTGCCAT CTTCGACATC 
CGCACCCTGA ACGGCGACCG ACACGGCGGC AACGTACTTG TCTGCAACTA TCACCGCTGC 
CGCGACGGAA GAAAGCCCGT CATGGCACGT CGTCCGCGGT GCGCCCGCCT AGCTAACGCT 
GCGGGGAGCG ACGGGACTGC ATCGTCGCCT TCGGCGTCTT CGACAGCGGC CCGATTGTCA 
CCTGAGATGC CCGCGACCAT CACCACGGCC AAGGAAGACG TTCCGCATTT GATCCCGATC 
GACCACAGAT ATATCTGTCC GTCCGGCTAC GCCGATCCGG ACTACGAGTG GCTGTCATGG 
CCCCAATCCA AGAAGCCGTT TTCGGAGCGC AATCTGAACT ACATCGCCGC CCTGGACGCA 
GTGGCAGATG CGGAGCTGGT GCGATCAGCG CTCCTCGCAC ACAGCGGCGT CCCCACCCAC 
GATGTGTCGA CGCCGCGAAC AAGCGCAGTC TGCAATGACT TTGAGATGGC GGAGGGGCAG 
CGAGACGCTG CGCTGACGTC GCTGACGCGC GATGATGCTC AGTATGCCAG AGCAGCCATG 
GGCTGTGCGA CGGTTGACGC AGCGAGTGCA GCGCTCGCGT CGCGTCACCT TCCGCGGGAG 
TTTTTCGGCC GGGGTGCTGC CGCCGCGAGC TTGGACGATC TCACGGGGCT CCCGCCTCTG 
CCGACGGCGT CGACCAAAAG AGCGGTGGCG CCGACAACCA GTGCGGCTGC AGCACCCTGC 
GCGTCTAGGG CTGCAACCGC GAAGAAAAGC AGCACCATGG ATGGTGGCGC TGAGGCCCCC 
TCCGGCCATC CGTATGTGAG CACTTGGGAT CCAGCAGCTG TAGAGCTGAT GATCAATTTC 
GATCGAGGCG ATAGTTTGAG CACGGAGGCG ATGCACAAAG ACGCTGCTGC TGTCCGTGCT 
CGTGCAATGT CGACTGCGTG GTCGGCGTCT TCGTCCTCCT CCACTCCACC CCTTGAATCC 
TTGCATGCCG GACCACGCGA GCATGCATCC AACTCTGTCG CGTACGACAG GGACGCGGCC 
AACACGGCGG CAGAGGTGAC GTGCTGCACG ACGCGCCTGC TACAGATCGC AGCCCTTGAG 
TTTCACATGA CGGCGTACGA GATCGGAAGT CTGTGCCGGC GCCCGCGCGT CACGCAGGCG 
TCGGTGCTGG AGGAAGTCCT CGAACAGGCG AGAGATGAAC AGACGTGGGA GCCGGTCTGG 
TTCAGGCTCG ACGATGTTGT CCGGCAGCGG CTCGCTGACC TCAGCACGTC TGGCCAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001466443.2
CDS	1..3360
Translation	MCISSLVSLLLFSRFEFVCVLLSCLHLFGGRRVSLFLHAPTIIFVCTPAQLFYCRCSVCVCVYVWKGGGLSLPANRLPPPAARDALVFAIQPRPPPPPAVLALLPCSETVRVPSEATVALVSKHEEAGTVAAVSPSIPSSLSVASSSHKEMREEPRRRRAEVAEDVRVQQHRATSVPTSPLTPPLLLQRNREVVALGNYTSRGVEGSDEGSVSTTVTSNVTDRSGPAGNCKSGTPHSSSSRVLDLTPFAESAEDDRDDRGSKWDRTAAFGIPAPATLRISTYRTTADITTDRTRNSKNSSSTCLHLGDAWQEREKSSPDANTAAIPTAGMTPPFSISLSSDSLSCAMPSVRRSSPELVRRGNGTTRQLSRKCLRNANSACGDSGRCTGPVARTTTPTTAPSTALLSSSYVACFQGHNAMPISDKDGDSSLRLRPRRCRGGSSCGSYEHWTMKPRLSGVNEVLLQSASASGEPQLFRQALAAFQLWDTLLRLELHSNSAGGTYMVRLARPSSSSATATFAATDSDSHGAVVAVFKPCDEEIGQESNPHANRESDRTETFAPGSGSRREVLAYLLDHGHNAGVPPTLEVASTYWAGVGATTANSNGGGGAATASLSTGTLGAVAGGGDAPANSGLRSSRTGGTDWRGIGADDGDSVAARVAASTHLRIGSLQLFVPGCEEAADVLPGHFDVDEVHALAIFDIRTLNGDRHGGNVLVCNYHRCRDGRKPVMARRPRCARLANAAGSDGTASSPSASSTAARLSPEMPATITTAKEDVPHLIPIDHRYICPSGYADPDYEWLSWPQSKKPFSERNLNYIAALDAVADAELVRSALLAHSGVPTHDVSTPRTSAVCNDFEMAEGQRDAALTSLTRDDAQYARAAMGCATVDAASAALASRHLPREFFGRGAAAASLDDLTGLPPLPTASTKRAVAPTTSAAAAPCASRAATAKKSSTMDGGAEAPSGHPYVSTWDPAAVELMINFDRGDSLSTEAMHKDAAAVRARAMSTAWSASSSSSTPPLESLHAGPREHASNSVAYDRDAANTAAEVTCCTTRLLQIAALEFHMTAYEIGSLCRRPRVTQASVLEEVLEQARDEQTWEPVWFRLDDVVRQRLADLSTSGQ

Target ORF information:

RefSeq Version	XM_001466406.2
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 hypothetical protein, unknown function partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001466406.2

ORF Insert Sequence:

ATGTGCATCT CTTCGTTGGT GTCTCTCCTA CTCTTCTCTC GTTTCGAATT CGTTTGTGTG 
CTCTTGTCTT GCCTTCATCT CTTTGGTGGC CGGCGCGTCT CCCTTTTCCT TCACGCCCCC 
ACCATCATCT TCGTGTGCAC TCCTGCTCAG CTCTTCTATT GCCGCTGCAG TGTGTGCGTG 
TGTGTGTACG TGTGGAAGGG AGGGGGTCTG TCTCTTCCCG CCAATCGCCT CCCACCACCC 
GCCGCCAGAG ACGCGCTCGT ATTTGCGATA CAACCTCGAC CCCCCCCCCC CCCAGCCGTT 
CTTGCGCTTC TTCCCTGCTC TGAAACGGTG CGTGTGCCCT CCGAAGCTAC GGTGGCGCTG 
GTGTCGAAGC ACGAAGAGGC CGGCACCGTC GCTGCTGTCT CGCCTTCGAT ACCGTCGTCT 
CTCTCAGTCG CGTCATCAAG TCACAAGGAG ATGCGAGAGG AACCGCGGCG GCGCCGAGCC 
GAGGTCGCCG AAGACGTGCG CGTTCAGCAA CATCGAGCCA CGTCGGTGCC CACGTCCCCG 
CTGACGCCGC CGCTTCTGCT CCAGCGGAAT CGAGAGGTAG TGGCGCTGGG CAACTACACA 
TCGAGAGGGG TCGAGGGGTC TGACGAAGGC AGCGTGAGCA CGACCGTCAC CTCCAACGTG 
ACTGACCGTT CTGGGCCCGC TGGAAACTGC AAGAGCGGAA CTCCCCACTC CAGCAGCTCC 
CGCGTACTGG ACTTGACGCC ATTTGCTGAG AGCGCCGAGG ACGACCGGGA CGACCGCGGG 
AGCAAGTGGG ACCGCACCGC CGCTTTCGGC ATCCCCGCGC CAGCGACCTT GCGCATATCG 
ACCTACCGCA CGACCGCTGA CATCACTACC GATCGCACGA GGAACAGCAA AAACAGCAGC 
AGCACTTGCT TGCATCTTGG AGATGCGTGG CAGGAGCGGG AGAAGAGCTC GCCAGATGCA 
AACACAGCTG CGATCCCCAC AGCGGGAATG ACGCCGCCTT TCTCAATCTC TCTCTCGTCC 
GACTCGTTGT CGTGCGCTAT GCCGAGCGTG AGGAGATCCT CCCCCGAGCT GGTGAGACGC 
GGGAACGGCA CGACACGACA GCTCTCTCGC AAGTGTCTAC GGAACGCAAA TTCGGCGTGC 
GGTGATAGCG GTCGCTGCAC TGGACCTGTG GCGCGCACCA CTACGCCGAC GACGGCACCG 
TCTACCGCCC TTCTCTCTTC CTCTTACGTG GCCTGCTTCC AGGGCCACAA CGCCATGCCC 
ATCAGTGACA AGGACGGGGA CAGCTCGCTG CGTCTCCGTC CGCGCCGATG CCGCGGCGGC 
AGCAGCTGCG GCTCGTACGA GCACTGGACC ATGAAGCCGC GACTTAGCGG CGTCAACGAG 
GTTCTGCTAC AGAGTGCATC TGCATCCGGC GAGCCTCAGC TATTCCGCCA GGCGCTCGCT 
GCCTTTCAGC TGTGGGACAC CCTACTGCGC CTGGAGCTGC ACAGCAACAG CGCAGGCGGC 
ACGTACATGG TGCGGCTTGC AAGGCCGTCG TCCTCATCGG CGACGGCGAC TTTCGCGGCG 
ACCGACAGCG ACAGCCATGG CGCCGTGGTG GCTGTGTTCA AGCCATGCGA CGAGGAAATC 
GGCCAGGAGA GCAACCCACA CGCGAATCGT GAAAGCGACC GCACGGAGAC GTTTGCCCCC 
GGCAGCGGCA GCCGGCGTGA GGTGCTCGCG TACCTCCTCG ATCACGGACA CAACGCCGGG 
GTGCCGCCGA CGCTGGAGGT GGCATCGACC TACTGGGCCG GGGTGGGTGC GACAACAGCC 
AACAGCAACG GGGGTGGTGG TGCTGCTACC GCGAGCTTGT CCACAGGCAC ACTGGGCGCG 
GTGGCAGGAG GTGGAGATGC CCCTGCGAAC AGCGGCCTTC GGAGTTCACG CACGGGTGGG 
ACAGACTGGA GAGGTATCGG CGCTGACGAT GGCGACAGCG TTGCCGCTCG AGTGGCAGCA 
TCTACGCACC TCCGGATCGG CAGCTTGCAG CTTTTCGTGC CTGGCTGTGA AGAGGCCGCG 
GACGTTCTCC CCGGCCACTT CGACGTCGAC GAGGTGCACG CGCTTGCCAT CTTCGACATC 
CGCACCCTGA ACGGCGACCG ACACGGCGGC AACGTACTTG TCTGCAACTA TCACCGCTGC 
CGCGACGGAA GAAAGCCCGT CATGGCACGT CGTCCGCGGT GCGCCCGCCT AGCTAACGCT 
GCGGGGAGCG ACGGGACTGC ATCGTCGCCT TCGGCGTCTT CGACAGCGGC CCGATTGTCA 
CCTGAGATGC CCGCGACCAT CACCACGGCC AAGGAAGACG TTCCGCATTT GATCCCGATC 
GACCACAGAT ATATCTGTCC GTCCGGCTAC GCCGATCCGG ACTACGAGTG GCTGTCATGG 
CCCCAATCCA AGAAGCCGTT TTCGGAGCGC AATCTGAACT ACATCGCCGC CCTGGACGCA 
GTGGCAGATG CGGAGCTGGT GCGATCAGCG CTCCTCGCAC ACAGCGGCGT CCCCACCCAC 
GATGTGTCGA CGCCGCGAAC AAGCGCAGTC TGCAATGACT TTGAGATGGC GGAGGGGCAG 
CGAGACGCTG CGCTGACGTC GCTGACGCGC GATGATGCTC AGTATGCCAG AGCAGCCATG 
GGCTGTGCGA CGGTTGACGC AGCGAGTGCA GCGCTCGCGT CGCGTCACCT TCCGCGGGAG 
TTTTTCGGCC GGGGTGCTGC CGCCGCGAGC TTGGACGATC TCACGGGGCT CCCGCCTCTG 
CCGACGGCGT CGACCAAAAG AGCGGTGGCG CCGACAACCA GTGCGGCTGC AGCACCCTGC 
GCGTCTAGGG CTGCAACCGC GAAGAAAAGC AGCACCATGG ATGGTGGCGC TGAGGCCCCC 
TCCGGCCATC CGTATGTGAG CACTTGGGAT CCAGCAGCTG TAGAGCTGAT GATCAATTTC 
GATCGAGGCG ATAGTTTGAG CACGGAGGCG ATGCACAAAG ACGCTGCTGC TGTCCGTGCT 
CGTGCAATGT CGACTGCGTG GTCGGCGTCT TCGTCCTCCT CCACTCCACC CCTTGAATCC 
TTGCATGCCG GACCACGCGA GCATGCATCC AACTCTGTCG CGTACGACAG GGACGCGGCC 
AACACGGCGG CAGAGGTGAC GTGCTGCACG ACGCGCCTGC TACAGATCGC AGCCCTTGAG 
TTTCACATGA CGGCGTACGA GATCGGAAGT CTGTGCCGGC GCCCGCGCGT CACGCAGGCG 
TCGGTGCTGG AGGAAGTCCT CGAACAGGCG AGAGATGAAC AGACGTGGGA GCCGGTCTGG 
TTCAGGCTCG ACGATGTTGT CCGGCAGCGG CTCGCTGACC TCAGCACGTC TGGCCAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_27_2060 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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