LINJ_19_1040 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_19_1040
Entrez Gene ID	5068476
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001465028.2	XP_001465065.2	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_19_1040 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_19_1040 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc02219	XM_001465028.2 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_19_1040 ( XM_001465028.2 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001465065.2 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

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CloneID	OLc02219
Clone ID Related Accession (Same CDS sequence)	XM_001465028.2
Accession Version	XM_001465028.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2895bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009403). On Jul 14, 2011 this sequence version replaced XM_001465028.1. COMPLETENESS: incomplete on both ends.

ATGGCGCTCG CGTTATCCTC ACGGAAGGCG GATGCCGGTG CCTTGGCGGC CATGACTCGC 
GTGGCTGTTT CAAATCCGAC CGCGCACGCC ACGGCGTTGC CGCGGAGCCT CTTGTACGTG 
TGGGTGGTGG GCAACCCGAC CAGCGGCGGC GAACGAGGTG CGGCGCTGCT GGATCAAGTT 
GAGACGCTGT TCTGCCAATC TTTCGGCAGA GATACAGTGC ACACCGCCAG CAGCAGCAAC 
CTCTTGCACA TCCTTTCCTT GCATCAGCCT GTGCCAGGGT CTTCATCGGA AGGGATGGAA 
AGTGGAGCAC ACGGGCACAG GCCTGAAGCA TCAGCGTGGG GGCCGACCGC TGGCTCAGCA 
CCACCATACT CGTCGGCTGT GAGTGCTGTG TGGAATGCCA CAGCAGCGGC CATGCCGGCG 
ACCCCAGCTG ACTGCGCACT GTCCTCCGTG GCATCCTCTG TTAGTGGTGT CGCGCTGCGT 
ACGCTTATCA TTCGCACGAA CCGATGTGGA CACTTGAAGC TGTTGAGTCA CTCGCTCAGT 
CAACTCATTC TGTGCTCTCG TCTCGACGAC GATCGTCAGC GGCCGCCGCA GGGCCCCATG 
CTGTCTTCCA CGCCGCACAG CGCCAGCGCT TCGGCAACTC TTGGGAACGA CAACGACGAG 
TGCGAATCGC CGCCGCTAGG CATCAAAAGA ACATCCGCCA CTTACCAGCG CGCAAGCAGG 
AGTCGTCCAG AGCAGCCGTC CACGCATCAC GTTATTCTCG TCGTTGGTGG CGATGGGACA 
CTGAGCGAAG TCACGAACGG GCTGTGCGAG GGAACGCTAG CCGGGTTCGC ACAGCTTGCA 
CTGAGAGGTG GCTCTAGTGC CGACACTGCC GCAGCCACAT CGCACGCACA CGTTGAGCGC 
GAGGCCGCGG TGTTGTCGCA CCTTCTTCCC GCTGTTCTGT ATGTGCCGGC AGGAACTGGC 
TCCGACTTTG CCAAACTTGG ATTATGCTGC CGCACTCCAG AGGACGCTCT GCGAGTCGTG 
CGCGACGGAC TCGCACGGGA GCTCTGCCCC GTCGCGAGCA GCCGCGGCGG CGATGATGGA 
GCACACGTTG ACAGCGAGAG TTGTAGGTCT ATGGCTTCGA GCTCACCTGC TGCGCGGCAA 
ACCATATCTG CGCCATCCAG ATTGTCCGCG TGTGCTGCGT ACGCGGTGGA TGTCGGCCGG 
ATCGAGTTTC TGCGCACCGG CACACGACAC TTCTTCATCA ATGAGTGCTC CGCTGGCATG 
TCGTGCGACG TCATCCAGCG TGGGGAGCGG TTCAAGCACT GTCGATGGAT TTCCATGCTG 
GGCGGTCTAG TGCTGTTCGC CGCGTCATCC TTTGTGTCGC TGGTGCTCAT GAAGCCGAAG 
CCACTGTACA TCTGCAAGCT GCCCCCACGT GTGCCACTGT CCGCCGCCTC GGCGGCCCGG 
GCGGAAGACG TCGACACGGA CGGCGGGGCA ACCGAAACCG ACGCGAGCCA AGAGCAGGCG 
AGCAAGGAAA GCATTGGCGG CAGCGACAAC TACGCAGCTG GGGTGCGCAG CAGCGACACG 
GACTGCACGT CAATCTCTAC AAGCCCGCTC TCCGATGCGG CGTCATCTTC GCCGTTGGGA 
TGGTCTCACT CCCTTGCTTC GCTTGCCCCC TTTGCACCCT TGAGCAAGCA GCTGGGCCGG 
TTGCGTGCGC GACTGCAGCG GAGTGCGCAC GTGGAGCCGA GGACAGACGC TCCTGGTCAC 
CGCTCAGATG GTTCCCGGGA CACATCTGCA AACTACTGCG CTCAGCTGGC AGCGCCAGCG 
GCTCCAGCCA AGAACGGCGC GACGGCGTAC ACGCTGCATG CGCGCACGCC AATGCCGCCT 
TTACATGCCA AGAAGGTTCG ATGTACGCTT CAGACGCCCT CCCATCAAAT CCTGCAGCTT 
CTCGACATCA GCCCCGACGA GCTTGAGATG CACCGTATGC AGCAGGAGCA GCGTGATACC 
GGGGCGCCGG CGGGCACTTC AAGCACCGAC TTCGCCACCG CCACCTCGAT AAAGGGCATG 
GGTAGGGACG CCACCAGCAA AGGCACCGCC GCCGCCACGA GCTCGGGGGA AGACGAGGTG 
CAGCATGAAC ACGTGCACCG CAAGCGGAAT GCGCAGATTG GCAGTGATGA CCACATCGGC 
GAGCACCACT GTCGCGTAAA CAGTGGGGCC CTGTATGTCG ACGCCGCGCC CGGCAAAGGT 
GACGACGCGT GGCCACGCAA CGTCGGCGAT GATCATCTCA TGTCGCTGAC GTGGGTGGAG 
CTGCCATCGT CCATGGTCGC CTTCGCGAAC GGCCGCTGGT ACGGTGGAGG CATGCTCGTC 
GCACCGCACG CGAATCCAAC AGATGGACTG CTCAGCTGCA CGAACTGGGT AGCGACGATC 
CTGCCCTTTG TCTTCAGCGC TTTCTCCCTC TACACAGGAT GGCACGTGCG CTGGCGCAGC 
ACGAGCGTCT TCGACGGCGA GCGGTTTCTC GTTACGGGCG GGACCCCTCC CAGTGCCGCC 
AAGGCTATGA CAGCATCTCT GCACAGCTTG GCAGACGCGC CTTTGGACGC CGAGGAAGCG 
CTGTACATGG AGGCGGACGG CGAAGTGCTG GAGGCAGCAC CGGCCATTGT GGAGCTTGCC 
GGCAAGCTTA TCTTTCTCGT TCCAAGCACA GCTACGGTGT GCCTTGGCAG TGCGGCTCCC 
GGCACAACTC GCGAGCGTGT CGCCGCGCAG CAGCAGCAGC AGCACGACGG CGGCGCGCGT 
TTGTTATCGG CCGACTCCGG CGTGGCGTTG CACCCTCCCG GTCGACGACT TGGCGGCCTT 
CGCGACGGGC TCGGCAGTTT GCTGAGGCGG CTGGCGAACT GCGCGAAACA GCGGATCGGC 
GAAAGGCGCT CGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001465065.2
CDS	1..2895
Translation	MALALSSRKADAGALAAMTRVAVSNPTAHATALPRSLLYVWVVGNPTSGGERGAALLDQVETLFCQSFGRDTVHTASSSNLLHILSLHQPVPGSSSEGMESGAHGHRPEASAWGPTAGSAPPYSSAVSAVWNATAAAMPATPADCALSSVASSVSGVALRTLIIRTNRCGHLKLLSHSLSQLILCSRLDDDRQRPPQGPMLSSTPHSASASATLGNDNDECESPPLGIKRTSATYQRASRSRPEQPSTHHVILVVGGDGTLSEVTNGLCEGTLAGFAQLALRGGSSADTAAATSHAHVEREAAVLSHLLPAVLYVPAGTGSDFAKLGLCCRTPEDALRVVRDGLARELCPVASSRGGDDGAHVDSESCRSMASSSPAARQTISAPSRLSACAAYAVDVGRIEFLRTGTRHFFINECSAGMSCDVIQRGERFKHCRWISMLGGLVLFAASSFVSLVLMKPKPLYICKLPPRVPLSAASAARAEDVDTDGGATETDASQEQASKESIGGSDNYAAGVRSSDTDCTSISTSPLSDAASSSPLGWSHSLASLAPFAPLSKQLGRLRARLQRSAHVEPRTDAPGHRSDGSRDTSANYCAQLAAPAAPAKNGATAYTLHARTPMPPLHAKKVRCTLQTPSHQILQLLDISPDELEMHRMQQEQRDTGAPAGTSSTDFATATSIKGMGRDATSKGTAAATSSGEDEVQHEHVHRKRNAQIGSDDHIGEHHCRVNSGALYVDAAPGKGDDAWPRNVGDDHLMSLTWVELPSSMVAFANGRWYGGGMLVAPHANPTDGLLSCTNWVATILPFVFSAFSLYTGWHVRWRSTSVFDGERFLVTGGTPPSAAKAMTASLHSLADAPLDAEEALYMEADGEVLEAAPAIVELAGKLIFLVPSTATVCLGSAAPGTTRERVAAQQQQQHDGGARLLSADSGVALHPPGRRLGGLRDGLGSLLRRLANCAKQRIGERRS

Target ORF information:

RefSeq Version	XM_001465028.2
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001465028.2

ORF Insert Sequence:

ATGGCGCTCG CGTTATCCTC ACGGAAGGCG GATGCCGGTG CCTTGGCGGC CATGACTCGC 
GTGGCTGTTT CAAATCCGAC CGCGCACGCC ACGGCGTTGC CGCGGAGCCT CTTGTACGTG 
TGGGTGGTGG GCAACCCGAC CAGCGGCGGC GAACGAGGTG CGGCGCTGCT GGATCAAGTT 
GAGACGCTGT TCTGCCAATC TTTCGGCAGA GATACAGTGC ACACCGCCAG CAGCAGCAAC 
CTCTTGCACA TCCTTTCCTT GCATCAGCCT GTGCCAGGGT CTTCATCGGA AGGGATGGAA 
AGTGGAGCAC ACGGGCACAG GCCTGAAGCA TCAGCGTGGG GGCCGACCGC TGGCTCAGCA 
CCACCATACT CGTCGGCTGT GAGTGCTGTG TGGAATGCCA CAGCAGCGGC CATGCCGGCG 
ACCCCAGCTG ACTGCGCACT GTCCTCCGTG GCATCCTCTG TTAGTGGTGT CGCGCTGCGT 
ACGCTTATCA TTCGCACGAA CCGATGTGGA CACTTGAAGC TGTTGAGTCA CTCGCTCAGT 
CAACTCATTC TGTGCTCTCG TCTCGACGAC GATCGTCAGC GGCCGCCGCA GGGCCCCATG 
CTGTCTTCCA CGCCGCACAG CGCCAGCGCT TCGGCAACTC TTGGGAACGA CAACGACGAG 
TGCGAATCGC CGCCGCTAGG CATCAAAAGA ACATCCGCCA CTTACCAGCG CGCAAGCAGG 
AGTCGTCCAG AGCAGCCGTC CACGCATCAC GTTATTCTCG TCGTTGGTGG CGATGGGACA 
CTGAGCGAAG TCACGAACGG GCTGTGCGAG GGAACGCTAG CCGGGTTCGC ACAGCTTGCA 
CTGAGAGGTG GCTCTAGTGC CGACACTGCC GCAGCCACAT CGCACGCACA CGTTGAGCGC 
GAGGCCGCGG TGTTGTCGCA CCTTCTTCCC GCTGTTCTGT ATGTGCCGGC AGGAACTGGC 
TCCGACTTTG CCAAACTTGG ATTATGCTGC CGCACTCCAG AGGACGCTCT GCGAGTCGTG 
CGCGACGGAC TCGCACGGGA GCTCTGCCCC GTCGCGAGCA GCCGCGGCGG CGATGATGGA 
GCACACGTTG ACAGCGAGAG TTGTAGGTCT ATGGCTTCGA GCTCACCTGC TGCGCGGCAA 
ACCATATCTG CGCCATCCAG ATTGTCCGCG TGTGCTGCGT ACGCGGTGGA TGTCGGCCGG 
ATCGAGTTTC TGCGCACCGG CACACGACAC TTCTTCATCA ATGAGTGCTC CGCTGGCATG 
TCGTGCGACG TCATCCAGCG TGGGGAGCGG TTCAAGCACT GTCGATGGAT TTCCATGCTG 
GGCGGTCTAG TGCTGTTCGC CGCGTCATCC TTTGTGTCGC TGGTGCTCAT GAAGCCGAAG 
CCACTGTACA TCTGCAAGCT GCCCCCACGT GTGCCACTGT CCGCCGCCTC GGCGGCCCGG 
GCGGAAGACG TCGACACGGA CGGCGGGGCA ACCGAAACCG ACGCGAGCCA AGAGCAGGCG 
AGCAAGGAAA GCATTGGCGG CAGCGACAAC TACGCAGCTG GGGTGCGCAG CAGCGACACG 
GACTGCACGT CAATCTCTAC AAGCCCGCTC TCCGATGCGG CGTCATCTTC GCCGTTGGGA 
TGGTCTCACT CCCTTGCTTC GCTTGCCCCC TTTGCACCCT TGAGCAAGCA GCTGGGCCGG 
TTGCGTGCGC GACTGCAGCG GAGTGCGCAC GTGGAGCCGA GGACAGACGC TCCTGGTCAC 
CGCTCAGATG GTTCCCGGGA CACATCTGCA AACTACTGCG CTCAGCTGGC AGCGCCAGCG 
GCTCCAGCCA AGAACGGCGC GACGGCGTAC ACGCTGCATG CGCGCACGCC AATGCCGCCT 
TTACATGCCA AGAAGGTTCG ATGTACGCTT CAGACGCCCT CCCATCAAAT CCTGCAGCTT 
CTCGACATCA GCCCCGACGA GCTTGAGATG CACCGTATGC AGCAGGAGCA GCGTGATACC 
GGGGCGCCGG CGGGCACTTC AAGCACCGAC TTCGCCACCG CCACCTCGAT AAAGGGCATG 
GGTAGGGACG CCACCAGCAA AGGCACCGCC GCCGCCACGA GCTCGGGGGA AGACGAGGTG 
CAGCATGAAC ACGTGCACCG CAAGCGGAAT GCGCAGATTG GCAGTGATGA CCACATCGGC 
GAGCACCACT GTCGCGTAAA CAGTGGGGCC CTGTATGTCG ACGCCGCGCC CGGCAAAGGT 
GACGACGCGT GGCCACGCAA CGTCGGCGAT GATCATCTCA TGTCGCTGAC GTGGGTGGAG 
CTGCCATCGT CCATGGTCGC CTTCGCGAAC GGCCGCTGGT ACGGTGGAGG CATGCTCGTC 
GCACCGCACG CGAATCCAAC AGATGGACTG CTCAGCTGCA CGAACTGGGT AGCGACGATC 
CTGCCCTTTG TCTTCAGCGC TTTCTCCCTC TACACAGGAT GGCACGTGCG CTGGCGCAGC 
ACGAGCGTCT TCGACGGCGA GCGGTTTCTC GTTACGGGCG GGACCCCTCC CAGTGCCGCC 
AAGGCTATGA CAGCATCTCT GCACAGCTTG GCAGACGCGC CTTTGGACGC CGAGGAAGCG 
CTGTACATGG AGGCGGACGG CGAAGTGCTG GAGGCAGCAC CGGCCATTGT GGAGCTTGCC 
GGCAAGCTTA TCTTTCTCGT TCCAAGCACA GCTACGGTGT GCCTTGGCAG TGCGGCTCCC 
GGCACAACTC GCGAGCGTGT CGCCGCGCAG CAGCAGCAGC AGCACGACGG CGGCGCGCGT 
TTGTTATCGG CCGACTCCGG CGTGGCGTTG CACCCTCCCG GTCGACGACT TGGCGGCCTT 
CGCGACGGGC TCGGCAGTTT GCTGAGGCGG CTGGCGAACT GCGCGAAACA GCGGATCGGC 
GAAAGGCGCT CGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_19_1040 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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