TM6 cDNA ORF clone, Vitis vinifera(wine grape)

Gene
Clones
gRNAs

Summary

Gene Symbol	TM6
Entrez Gene ID	100233014
Full Name	flowering-related B-class MADS-box protein
Gene Type	protein-coding
Organism	Vitis vinifera(wine grape)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001281008.1	NP_001267937.1	agamous-like MADS-box protein TM6

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome.
Da Silva C, Zamperin G, Ferrarini A, Minio A, Dal Molin A, Venturini L, Buson G, Tononi P, Avanzato C, Zago E, Boido E, Dellacassa E, Gaggero C, Pezzotti M, Carrau F, Delledonne M
The Plant cell25(12)4777-88(2013 Dec)

A high quality draft consensus sequence of the genome of a heterozygous grapevine variety.
Velasco R, Zharkikh A, Troggio M, Cartwright DA, Cestaro A, Pruss D, Pindo M, Fitzgerald LM, Vezzulli S, Reid J, Malacarne G, Iliev D, Coppola G, Wardell B, Micheletti D, Macalma T, Facci M, Mitchell JT, Perazzolli M, Eldredge G, Gatto P, Oyzerski R, Moretto M, Gutin N, Stefanini M, Chen Y, Segala C, Davenport C, Demattè L, Mraz A, Battilana J, Stormo K, Costa F, Tao Q, Si-Ammour A, Harkins T, Lackey A, Perbost C, Taillon B, Stella A, Solovyev V, Fawcett JA, Sterck L, Vandepoele K, Grando SM, Toppo S, Moser C, Lanchbury J, Bogden R, Skolnick M, Sgaramella V, Bhatnagar SK, Fontana P, Gutin A, Van de Peer Y, Salamini F, Viola R
PloS one2(12)e1326(2007 Dec)

Isolation of the three grape sub-lineages of B-class MADS-box TM6, PISTILLATA and APETALA3 genes which are differentially expressed during flower and fruit development.
Poupin MJ, Federici F, Medina C, Matus JT, Timmermann T, Arce-Johnson P
Gene404(1-2)10-24(2007 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following TM6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TM6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OVa22932	NM_001281008.1 Latest version!	Vitis vinifera flowering-related B-class MADS-box protein (TM6), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

TM6 ( NM_001281008.1 ) cDNA ORF clone, Vitis vinifera(wine grape) -> NP_001267937.1 Vitis vinifera flowering-related B-class MADS-box protein (TM6), mRNA.

Price & Availability↑

CloneID	OVa22932
Clone ID Related Accession (Same CDS sequence)	NM_001281008.1
Accession Version	NM_001281008.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 678bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1561132800000
Organism	Vitis vinifera(wine grape)
Product	agamous-like MADS-box protein TM6
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ979341.1. On Jul 24, 2013 this sequence version replaced XM_002273187.1. ##Evidence-Data-START## Transcript exon combination :: DQ979341.1, EC932106.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01056997, SAMN01056998 [ECO:0000348] ##Evidence-Data-END##

ATGGGTCGTG GGAAGATTGA GATCAAGAGG ATAGAGAACC CCACCAACAG GCAGGTCACC 
TACTCCAAGC GACGAAATGG TATTTTCAAG AAAGCCCAGG AGCTCACCGT TCTTTGTGAT 
GCTAAGGTTT CACTCATCAT GTTCTCCAAT ACTGGAAAAT TCCACGAATA TACCAGTCCT 
ACTATAACGA CGAAAAAGGT CTACGATCAG TATCAGAAGA CTTTAGGGAT TGATCTTTGG 
AGCTCTCACT ACGAGAGAAT GCAAGAAAAC TTGCGAAAAC TGAAAGAGAT CAACAACAAA 
TTAAGGAGAG AGATCAGGCA AAGAATGGGT GAAGATTTGG GCGATCTGAG CATTGAGGAC 
CTGCGCGGCC TTGAGCAGAA GATGGACGCT TCTTTAGGAT TAGTACGCGA ACGGAAGTAC 
CACGTGATCA AAACTCAGAC CGAGACCTAC AGGAAAAAGG TCAGGAACTT GGAAGAACAA 
CACGGAAATC TCCTTCTCAA CTTTGAAGCA AAATGCGATG ATCCACATTA CGGATTAGTG 
GAAAATGATG GAGATTATGA ATCAGCGGTG GCATTCGCGA ACGGGGCTTC CAACCTCTAT 
GCTTTTCGCC TGCATCAAGC CCACCCTAAT CTTCACCATG ATGGGGGATA TGGATCACAT 
GATCTGCGCC TTGCTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001267937.1
CDS	1..678
Translation	MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYTSPTITTKKVYDQYQKTLGIDLWSSHYERMQENLRKLKEINNKLRREIRQRMGEDLGDLSIEDLRGLEQKMDASLGLVRERKYHVIKTQTETYRKKVRNLEEQHGNLLLNFEAKCDDPHYGLVENDGDYESAVAFANGASNLYAFRLHQAHPNLHHDGGYGSHDLRLA

Target ORF information:

RefSeq Version	NM_001281008.1
Organism	Vitis vinifera(wine grape)
Definition	Vitis vinifera flowering-related B-class MADS-box protein (TM6), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001281008.1

ORF Insert Sequence:

ATGGGTCGTG GGAAGATTGA GATCAAGAGG ATAGAGAACC CCACCAACAG GCAGGTCACC 
TACTCCAAGC GACGAAATGG TATTTTCAAG AAAGCCCAGG AGCTCACCGT TCTTTGTGAT 
GCTAAGGTTT CACTCATCAT GTTCTCCAAT ACTGGAAAAT TCCACGAATA TACCAGTCCT 
ACTATAACGA CGAAAAAGGT CTACGATCAG TATCAGAAGA CTTTAGGGAT TGATCTTTGG 
AGCTCTCACT ACGAGAGAAT GCAAGAAAAC TTGCGAAAAC TGAAAGAGAT CAACAACAAA 
TTAAGGAGAG AGATCAGGCA AAGAATGGGT GAAGATTTGG GCGATCTGAG CATTGAGGAC 
CTGCGCGGCC TTGAGCAGAA GATGGACGCT TCTTTAGGAT TAGTACGCGA ACGGAAGTAC 
CACGTGATCA AAACTCAGAC CGAGACCTAC AGGAAAAAGG TCAGGAACTT GGAAGAACAA 
CACGGAAATC TCCTTCTCAA CTTTGAAGCA AAATGCGATG ATCCACATTA CGGATTAGTG 
GAAAATGATG GAGATTATGA ATCAGCGGTG GCATTCGCGA ACGGGGCTTC CAACCTCTAT 
GCTTTTCGCC TGCATCAAGC CCACCCTAAT CTTCACCATG ATGGGGGATA TGGATCACAT 
GATCTGCGCC TTGCTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome.
The Plant cell25(12)4777-88(2013 Dec)
Da Silva C,Zamperin G,Ferrarini A,Minio A,Dal Molin A,Venturini L,Buson G,Tononi P,Avanzato C,Zago E,Boido E,Dellacassa E,Gaggero C,Pezzotti M,Carrau F,Delledonne M

A high quality draft consensus sequence of the genome of a heterozygous grapevine variety.
PloS one2(12)e1326(2007 Dec)
Velasco R,Zharkikh A,Troggio M,Cartwright DA,Cestaro A,Pruss D,Pindo M,Fitzgerald LM,Vezzulli S,Reid J,Malacarne G,Iliev D,Coppola G,Wardell B,Micheletti D,Macalma T,Facci M,Mitchell JT,Perazzolli M,Eldredge G,Gatto P,Oyzerski R,Moretto M,Gutin N,Stefanini M,Chen Y,Segala C,Davenport C,Demattè L,Mraz A,Battilana J,Stormo K,Costa F,Tao Q,Si-Ammour A,Harkins T,Lackey A,Perbost C,Taillon B,Stella A,Solovyev V,Fawcett JA,Sterck L,Vandepoele K,Grando SM,Toppo S,Moser C,Lanchbury J,Bogden R,Skolnick M,Sgaramella V,Bhatnagar SK,Fontana P,Gutin A,Van de Peer Y,Salamini F,Viola R

Isolation of the three grape sub-lineages of B-class MADS-box TM6, PISTILLATA and APETALA3 genes which are differentially expressed during flower and fruit development.
Gene404(1-2)10-24(2007 Dec)
Poupin MJ,Federici F,Medina C,Matus JT,Timmermann T,Arce-Johnson P

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TM6 cDNA ORF clone, Vitis vinifera(wine grape)

Gene

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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