ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » THAPSDRAFT_1650 cDNA ORF clone

THAPSDRAFT_1650 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPSDRAFT_1650 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPSDRAFT_1650 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf05365 XM_002286875.1
Latest version!		 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $475.30
$679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    THAPSDRAFT_1650 ( XM_002286875.1 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002286911.1 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OTf05365
    Clone ID Related Accession (Same CDS sequence) XM_002286875.1
    Accession Version XM_002286875.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2574bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Thalassiosira pseudonana CCMP1335
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012064). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    ATGTATCACT CCTCCTCATC AACCGTCATT CGTCGACCGT ACCACTCTGA TAATCCTCCA 
    AGTCATGGAA GCAGCGATAA TGCCGGCGAT AGCTCGGGCA AAGAGACTAC TCTCGATGAT 
    TTCTACAGCG ATGTTATCCA GCAAGATTCA GAGATCAACG AACACATCAA TAGCACATCA 
    TTGGGTGCAC GTCTAATGAT GTCACCCGCA GTAGAAGAGG TGTACGATTT AGACGATGAC 
    TTAAAGAGAG GAGCTCTAGT GCCTTTCGTC GCCGTGTTAC CGGGGAAGAC AGTGGACAAT 
    CGCAACCATG CAGCAATAGG TTCAACAGCT ACGGGGGGTT TAGCAGAGAA GAAGAACGAC 
    ATACTGAATG TTGCTCTCTT CGTGGGAGGG GCTTTGCTAA GTGCCAGCAC TTCAGTTCCC 
    ATCACGCTAG TTCCAACCAT GGCAAGATCT CTTGTTGGCA ACGCAGATGA CGAATGGACC 
    TATTCATCCT ACTACGGAGG TGGGGGATAT TACTCATCCA CTGCAACTTT GGAAGTGTAT 
    GATGAGAGTG GAACACGAAA GAGATGGATT CCATTTAGAA TTCGTACGAG GAATAGTAGC 
    AATGCTCAAA ACGACAACCT CTCTTCGGCG TCATCTTTTG CATCACATCT TGCTGCAGTA 
    GTAACTCTTG CGACGGCCTT TGGAAAGTTC ATCAATGGTC CTTTAGTGGA TATTGCTGGA 
    GCACGGAGAC TACTTGTTGT GTACGGCGTA TGCACGAGCC TTGCCATCTT TGGATTGCAA 
    CACAGTTACA GTCCAAGAGC AGCAGTCTTT TGCTGTGCAG CCGCAGAGTT CTTTAGCTCA 
    GTGAGCTGGC CCTGTTGTAT AGTTATTCTG GGGGCGCACT ATGGCACAAA CGATGCGACA 
    AATAATGATT GTACGAATAC AGATGGCAGA TTTGAGAGAG GCATTTACAT CACGTCCATT 
    GCTTCTCGGT GTGGATCATT GCTCGCAATG CCTCTCTCTT CCTTACTGCT CAAATGGACC 
    GATCTAACTT GGAGAGATAC TGCTGGATTT GCATCACTAG TGTCATTCAT GGGCGTTGCA 
    GTGTTGTACT TCTTTGTTAC CGACTCTCCG GGCAAGGTGC ATTTTCCTTT GAATCCAATT 
    CGAGTGTCTC CGCCATCCAC CTACCAACCT TGGACACCAA AGACTTCATT ATCCCAAAGA 
    GCAGTGGCAT TCTGTTCATC TGCATACTAT ACTGTCTTAC CGTCTTTGAA GACGGTGGTA 
    ATATCGCGTG TGTTTTGGTT TGTGGCGATA GCTCACTCGG GAGCTTATAT GGTCAAATCG 
    TCAGAACGTA TTCTCTCAAC TTATTATCGG GATACATCTT TCGGCGAGAT TGCAGAAGGC 
    AAAGCTGGAG CAATGTCGGT ATTCTTATCC TTGGGGATGT TGGGTGGCCT TGTTTTCGGG 
    GGGAAAGCAT TTGCACAGTC AGCCGACGTG GAGCGATCGG AACCACACAA CAACACCCAG 
    ACATCTCGCA ACGACAGATC TGAGGTCCAA GGAGAGCCTT TTGATGCAAC ACAGTTACGT 
    CCAAAGAATA TGATCGCTTT CTTCTACTGC CTATCAATCT GCATGTGCTA CATCCTGTCA 
    TTCTTGGCGA TGCCATTAAT CCGTCGAGCT TTGCATTTGC CGGTACTTGT TCTGATTCTG 
    CAAGTCCTTG CAACGTTTGG ACTCGGTGCA GGAGTAGCAG TTCAGTATTA TCACCTCCCT 
    GCCATCGTTG GTGCCACTTT TGAACAAAAT CGAGGACTGT ATTGTGCCTA CACAGACGGC 
    GTCGCCGCCC TCATCAGTTC GATGGTTTGG CGACTTGTCG GTGGAGCAGT CTCAGAAGGA 
    AACCCAGAAG GTGGCGGATG GGCTTACGGT TGGGCTGCGG TTGCACTACT ACTCATCGTG 
    TGTGGTACGT TTATGGTGGG TATTATGGAA GTATACTTCG TTGGTGGTGG ATGGAGACAT 
    CTCAATACAC ATAAAGACCA CGGCAATGAC GACAGTTTCC CTAGAGATCT ACTGACCGAT 
    TTGAACGGGA GTTGGATGGA AGATGAGATA CGCTCTACGG GTCTTTCGTT GGAGGACTCT 
    TCTTTTCGTC GTTATAGTGG CATCAATATC CTATCAACTT CAGCTATTGA GTTTTTGAGC 
    CCAGCACGTC GCGAAAGAAA GTCATTGTTG ACGACTTCTG CTAACCCCCA CAACCAAGAG 
    GAGGCAACTC GTAGCAGACA AGAGGATTTG TTGGGCATAG ACGACGACGG CTCTCTCCTC 
    TATCCGATGA CAAAAGACAT TACCGTTGCA GTGTACCCAG AGCAACACAT CAACACTCAA 
    ACGGAGCCAT TGGATTTTGC TCCCATTGTT GATGCAACTC ACAAAAAGGC TGGTACGGAC 
    GTATCTGATG ATTACATCTC CTTCAGTGGC ATGCTTGATC CCAGTAAGAA GTGTCATATC 
    ACCTTCACAA ACTCTGAAGA CGGAGGAAGT GATATAAGAG AATGCTCTAC GTTTGACGAT 
    CCATACTCTT CATTGGAAAA CGTCGTCCCA AGCGGCGCTG AGCGAGCCGG GTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002286911.1
    CDS1..2574
    Translation

    Target ORF information:

    RefSeq Version XM_002286875.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002286875.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    ATGTATCACT CCTCCTCATC AACCGTCATT CGTCGACCGT ACCACTCTGA TAATCCTCCA 
    AGTCATGGAA GCAGCGATAA TGCCGGCGAT AGCTCGGGCA AAGAGACTAC TCTCGATGAT 
    TTCTACAGCG ATGTTATCCA GCAAGATTCA GAGATCAACG AACACATCAA TAGCACATCA 
    TTGGGTGCAC GTCTAATGAT GTCACCCGCA GTAGAAGAGG TGTACGATTT AGACGATGAC 
    TTAAAGAGAG GAGCTCTAGT GCCTTTCGTC GCCGTGTTAC CGGGGAAGAC AGTGGACAAT 
    CGCAACCATG CAGCAATAGG TTCAACAGCT ACGGGGGGTT TAGCAGAGAA GAAGAACGAC 
    ATACTGAATG TTGCTCTCTT CGTGGGAGGG GCTTTGCTAA GTGCCAGCAC TTCAGTTCCC 
    ATCACGCTAG TTCCAACCAT GGCAAGATCT CTTGTTGGCA ACGCAGATGA CGAATGGACC 
    TATTCATCCT ACTACGGAGG TGGGGGATAT TACTCATCCA CTGCAACTTT GGAAGTGTAT 
    GATGAGAGTG GAACACGAAA GAGATGGATT CCATTTAGAA TTCGTACGAG GAATAGTAGC 
    AATGCTCAAA ACGACAACCT CTCTTCGGCG TCATCTTTTG CATCACATCT TGCTGCAGTA 
    GTAACTCTTG CGACGGCCTT TGGAAAGTTC ATCAATGGTC CTTTAGTGGA TATTGCTGGA 
    GCACGGAGAC TACTTGTTGT GTACGGCGTA TGCACGAGCC TTGCCATCTT TGGATTGCAA 
    CACAGTTACA GTCCAAGAGC AGCAGTCTTT TGCTGTGCAG CCGCAGAGTT CTTTAGCTCA 
    GTGAGCTGGC CCTGTTGTAT AGTTATTCTG GGGGCGCACT ATGGCACAAA CGATGCGACA 
    AATAATGATT GTACGAATAC AGATGGCAGA TTTGAGAGAG GCATTTACAT CACGTCCATT 
    GCTTCTCGGT GTGGATCATT GCTCGCAATG CCTCTCTCTT CCTTACTGCT CAAATGGACC 
    GATCTAACTT GGAGAGATAC TGCTGGATTT GCATCACTAG TGTCATTCAT GGGCGTTGCA 
    GTGTTGTACT TCTTTGTTAC CGACTCTCCG GGCAAGGTGC ATTTTCCTTT GAATCCAATT 
    CGAGTGTCTC CGCCATCCAC CTACCAACCT TGGACACCAA AGACTTCATT ATCCCAAAGA 
    GCAGTGGCAT TCTGTTCATC TGCATACTAT ACTGTCTTAC CGTCTTTGAA GACGGTGGTA 
    ATATCGCGTG TGTTTTGGTT TGTGGCGATA GCTCACTCGG GAGCTTATAT GGTCAAATCG 
    TCAGAACGTA TTCTCTCAAC TTATTATCGG GATACATCTT TCGGCGAGAT TGCAGAAGGC 
    AAAGCTGGAG CAATGTCGGT ATTCTTATCC TTGGGGATGT TGGGTGGCCT TGTTTTCGGG 
    GGGAAAGCAT TTGCACAGTC AGCCGACGTG GAGCGATCGG AACCACACAA CAACACCCAG 
    ACATCTCGCA ACGACAGATC TGAGGTCCAA GGAGAGCCTT TTGATGCAAC ACAGTTACGT 
    CCAAAGAATA TGATCGCTTT CTTCTACTGC CTATCAATCT GCATGTGCTA CATCCTGTCA 
    TTCTTGGCGA TGCCATTAAT CCGTCGAGCT TTGCATTTGC CGGTACTTGT TCTGATTCTG 
    CAAGTCCTTG CAACGTTTGG ACTCGGTGCA GGAGTAGCAG TTCAGTATTA TCACCTCCCT 
    GCCATCGTTG GTGCCACTTT TGAACAAAAT CGAGGACTGT ATTGTGCCTA CACAGACGGC 
    GTCGCCGCCC TCATCAGTTC GATGGTTTGG CGACTTGTCG GTGGAGCAGT CTCAGAAGGA 
    AACCCAGAAG GTGGCGGATG GGCTTACGGT TGGGCTGCGG TTGCACTACT ACTCATCGTG 
    TGTGGTACGT TTATGGTGGG TATTATGGAA GTATACTTCG TTGGTGGTGG ATGGAGACAT 
    CTCAATACAC ATAAAGACCA CGGCAATGAC GACAGTTTCC CTAGAGATCT ACTGACCGAT 
    TTGAACGGGA GTTGGATGGA AGATGAGATA CGCTCTACGG GTCTTTCGTT GGAGGACTCT 
    TCTTTTCGTC GTTATAGTGG CATCAATATC CTATCAACTT CAGCTATTGA GTTTTTGAGC 
    CCAGCACGTC GCGAAAGAAA GTCATTGTTG ACGACTTCTG CTAACCCCCA CAACCAAGAG 
    GAGGCAACTC GTAGCAGACA AGAGGATTTG TTGGGCATAG ACGACGACGG CTCTCTCCTC 
    TATCCGATGA CAAAAGACAT TACCGTTGCA GTGTACCCAG AGCAACACAT CAACACTCAA 
    ACGGAGCCAT TGGATTTTGC TCCCATTGTT GATGCAACTC ACAAAAAGGC TGGTACGGAC 
    GTATCTGATG ATTACATCTC CTTCAGTGGC ATGCTTGATC CCAGTAAGAA GTGTCATATC 
    ACCTTCACAA ACTCTGAAGA CGGAGGAAGT GATATAAGAG AATGCTCTAC GTTTGACGAT 
    CCATACTCTT CATTGGAAAA CGTCGTCCCA AGCGGCGCTG AGCGAGCCGG GTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kröger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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