ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » THAPSDRAFT_22637 cDNA ORF clone

THAPSDRAFT_22637 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPSDRAFT_22637 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPSDRAFT_22637 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf07055 XM_002290559.1
Latest version!		 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $559.30
$799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    THAPSDRAFT_22637 ( XM_002290559.1 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002290595.1 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OTf07055
    Clone ID Related Accession (Same CDS sequence) XM_002290559.1
    Accession Version XM_002290559.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3438bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Thalassiosira pseudonana CCMP1335
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012068). COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    ATGCCACGAA GAAGGAACTA TCAATCTCTC TACGACGACC AAAACAGAGG CGGTGGTCAC 
    AGCTCCGACG AAGATCTTCT CGTGCAACAA CGTGCCCAAG TTCTTGACTC GGACGATGAA 
    GCCAGCGACA ACGACGGCGG GGAGAGCAGT GCAAGCTTGA CAGCGAGCGC TACCACCATC 
    AACGGCGGCA ATAGTCTCAA CGGACGTTCG CTTAGGCTTG CTCAATCCTA CATGAACTCT 
    CAGAATGGCG GTGACAAATA TTCATCCGCA CAGTCTCCAT CTGCCAATGG CAACGCCAAC 
    GTGTCGCCGA TGAACACCTC TCTGAATGAA AGCCATCACG AAAGTGATAC AGACGACGAG 
    TTAATGAATC CGTATATTAT GAATCCGTTT GTGTCTTCGG GGCTGATGCC TCCGTCTATG 
    GAGATGAGCA CTCTGAGTGG AAACAGCGGT GGCGAGGGGG GAGAAAATGA TGCACGTGAG 
    GCGCATAGAA ATTCGGCACA ACAACAACAA CAACACTCTC AGCAGTGGCA GACTCAACAA 
    CAAAACCAAC AGTCGCAACT GCATCGCCAA CGGCATCAAC AGCAGACACT GCCGACCTTT 
    GATCCATACT CACCCATCAA CGCACGAGTG CAACAACTCC GAGCCCAAGA TGAACTACTC 
    CACGAATTAG AATTTGAGGG AGAAGAAGAA AGTATCGACT TTTTATCCAC CGATGGTGCT 
    TCTCGTGGTG ATTTCAGTAA TTGTTCCTTC AACAATAGAA TTAGTGGGGA GGCTACCGCA 
    TCGTGGAGAG GGGATTTACT TCATGAGAAA CAATCGACGA CGCTGGGGGA AGAGCCTTCG 
    TTTGAATCGT CCTTTTCGCC CTTTCCCAAG CATAGTAGCA GCTCTTCTAG AAACAACGTG 
    TTTGTGGGGG AGTATGGAGA GTCCATTCCA CTTTCTGGTC GAGCTAGAGG TTCACCCAAA 
    GCTTCGGCAC CAGGAGGGGC ACGGGGAGTG GCATCTTCGC TGTTGAATGT GGTCAAGGCA 
    GTCATCTCAT CTGCATCATA CACTGCATCG TCTCTTCTCT ACGGAAACAA TCCATCCACT 
    AGATTTAACA ACCGCACTCG GTTTGATGGG AGAATAAGAG GGAACAACAT GCGTCATCAT 
    TGGGGAATGC TTTCCTACTT TCGCCTATTC GTCATTGCTA TGGCTGCATT GTTTGCACTT 
    GGCACCATGA CCATGGTCCG TCACGTCATG ATCAGTGATG GTGCTGCAGA AACAACTGCT 
    GTCAAGAGTA ACTTCATGAC GAACGGACAG AGCGTAGATG GCTCACAGGA GGAGTATGCT 
    CAGCGACCAA ATTCGTTGGT GATTAAAAAG ATGGAAAAGG CGAAGAAGAG GTGGTGGAAC 
    AGGTTGAGGC ATGGGGGATC GGATGCAGAT GCAAACGAAG GAGGACAGCC TTCTGTAGAG 
    GTGTATCACA ATGGAGAGAA AACAGACGCA GTTGTTGCTA ATGAACCGTC ATCAATTGTG 
    GAGGCTAACG AGACTGACAA TCACGACAAG GTTGTCGGGG AGCATCTAGA ACAAGTTCCG 
    ATCATTGTTG AAACTGGAGA AGATGGCTCT TTGTTGATCA AGTTGCCTCC ACCAAAGTTA 
    CACCTAGAAC AACCCCCGCC GCAATTGGGT GGATCCGACA CTGTGGTGAT CAAAGCTTTG 
    GAGTCAGAGG CTCTCGCGTT GCGTGACGGG GAGGATGATG AGACAATGTA CATTAGGCTT 
    CCCTACCCTG AGCAACGGAG AGTGCTATCA GATGACACGT CAGGCATGAC TCGCGAGGAG 
    TTGAATTCAC CACTACTCGG AGATTATAAT TCGCTTTCAA GTCACCCCAA CTTGATACGA 
    AGGCCACCAC CACCCCTTGC TCAATCTTCC CACGAACGCA AGGTTAACGC AAAGCATCAT 
    CATCTCCCTT ACTCAGCCCA CGAAGAGCAT CATCCCGGCG TGTTGAACGC GTTGCGGAAT 
    GAGTTTGAAT CTTGGAGGGA GAAGCACGGG AAAAAGTATG GATCTAGCGA GGAGAAGGAG 
    GAAAGGTTTC ACGTGTGGAA GAATAACCAC TTTGGCATCA CTGAGAAGAA CATGAAGCAC 
    GGTCCCTGTA GTTTGACTGG CAAGGCTGTG TTTGGCCACA ACGTCTTTTC TGATCTTGCA 
    CCCGAAGAAT TTCAGCAGAG GTATCTCACG GGATACCACG GACCGAAAGC TCACGTCAAA 
    GAGAACCATT CCCACACCCA CCAAGCTGCT GCTGGGGCTC GTGGCGTTTC TAGAGGTCAC 
    AAGAAGAATT CTGATGGAGA AGTAGACCCT CCTCCTCTAG CGTCCGTGAA ACGTCACCCA 
    AGCATCCAAC GCAAGCTTAA TGAATACGCG GAGGAGGTTG AACCTAGTCG CTTACAAGGA 
    ACTAGATACA AATCATCATC ATTTGCAGGT GGATGCCAGT GGTGGGATGT CTCCTGTATG 
    CTTCGATACG TGTTTGGCTA CCAGTACATT GGAGGAACGA GAGAGCCCGT CTACGATGAA 
    AGCAGTTATC CTTCAGCATT GGACTGGCGT AACCTCGGTG TAGTATCAAG TGTTCACGCT 
    CAAGGAAGTT GTGGCGCTTG TTGGGCCATC ACTGCAGTGG AGACGATTGA GTCTGCCTAC 
    GCTATTGCAA CTGGCAATCT TCTTGACCTT TCCGAGGATG AAGTAATCGC TTGCGACGGT 
    TCCTGCGAGA TGTGCAACGG AGGATGGCCT CAGAATGCCT ACAAATACGT GATGAAACAT 
    GGAGGTCTTC CTGTGCAGAG CTCCAACTAT GATGGAGACT TTCTCTCTTC AGTAACTGCA 
    GTGTTGGCTG GAGAGAGTTA CGATGTTTCG GAATATGAGA TGTCGTCTTA CTTTGCAAAG 
    ACATGCCCGT CTGGAGTGCG AGAGGGTGGC AACGGAAATG CTGCCGAAGA TGGTGACAAT 
    TCCAAGTCTG CGAGCCAAGA CTACTCGTCC AACTCAGGAG CCGCCCGTTA TGGCAAAATC 
    AAGGGATACG GATACGCAAC CAAGCGTTGC ATTTGCTATA CCGACGGCAG TGGATGTGAT 
    TGCAACGATC AAAACGAAAA GACTGCCGTC CTAAATGTCG CGTCTTACGG ACCCGCCGCC 
    GTCTGTCTGG AAGCCTCCCT TTGGCAAAGC TATGAAGGCG GTATCATGAC TGCCGATATC 
    GGGTGTAGCT CTGGCTTCTT GGACATGAAC CACTGCGTTG AAGTTGTAGG CTATGCATTC 
    ACTGACGGCA ATGACAACGA CGGAAATGGA GATCAGAAGA GTGGAAGTAG AGATGGTGGA 
    GGCGAAATAC GTGAAGGGTA CTGGATCGTC AAGAATCAAT GGTCTAACTA CTGGGGCATG 
    AATGGCTATG CGTGGTTAAA AATGGGTTCC AACACGTGTG GCATTTTGAA TGATATGACT 
    CAGGTCTACA TGGAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002290595.1
    CDS1..3438
    Translation

    Target ORF information:

    RefSeq Version XM_002290559.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002290559.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    ATGCCACGAA GAAGGAACTA TCAATCTCTC TACGACGACC AAAACAGAGG CGGTGGTCAC 
    AGCTCCGACG AAGATCTTCT CGTGCAACAA CGTGCCCAAG TTCTTGACTC GGACGATGAA 
    GCCAGCGACA ACGACGGCGG GGAGAGCAGT GCAAGCTTGA CAGCGAGCGC TACCACCATC 
    AACGGCGGCA ATAGTCTCAA CGGACGTTCG CTTAGGCTTG CTCAATCCTA CATGAACTCT 
    CAGAATGGCG GTGACAAATA TTCATCCGCA CAGTCTCCAT CTGCCAATGG CAACGCCAAC 
    GTGTCGCCGA TGAACACCTC TCTGAATGAA AGCCATCACG AAAGTGATAC AGACGACGAG 
    TTAATGAATC CGTATATTAT GAATCCGTTT GTGTCTTCGG GGCTGATGCC TCCGTCTATG 
    GAGATGAGCA CTCTGAGTGG AAACAGCGGT GGCGAGGGGG GAGAAAATGA TGCACGTGAG 
    GCGCATAGAA ATTCGGCACA ACAACAACAA CAACACTCTC AGCAGTGGCA GACTCAACAA 
    CAAAACCAAC AGTCGCAACT GCATCGCCAA CGGCATCAAC AGCAGACACT GCCGACCTTT 
    GATCCATACT CACCCATCAA CGCACGAGTG CAACAACTCC GAGCCCAAGA TGAACTACTC 
    CACGAATTAG AATTTGAGGG AGAAGAAGAA AGTATCGACT TTTTATCCAC CGATGGTGCT 
    TCTCGTGGTG ATTTCAGTAA TTGTTCCTTC AACAATAGAA TTAGTGGGGA GGCTACCGCA 
    TCGTGGAGAG GGGATTTACT TCATGAGAAA CAATCGACGA CGCTGGGGGA AGAGCCTTCG 
    TTTGAATCGT CCTTTTCGCC CTTTCCCAAG CATAGTAGCA GCTCTTCTAG AAACAACGTG 
    TTTGTGGGGG AGTATGGAGA GTCCATTCCA CTTTCTGGTC GAGCTAGAGG TTCACCCAAA 
    GCTTCGGCAC CAGGAGGGGC ACGGGGAGTG GCATCTTCGC TGTTGAATGT GGTCAAGGCA 
    GTCATCTCAT CTGCATCATA CACTGCATCG TCTCTTCTCT ACGGAAACAA TCCATCCACT 
    AGATTTAACA ACCGCACTCG GTTTGATGGG AGAATAAGAG GGAACAACAT GCGTCATCAT 
    TGGGGAATGC TTTCCTACTT TCGCCTATTC GTCATTGCTA TGGCTGCATT GTTTGCACTT 
    GGCACCATGA CCATGGTCCG TCACGTCATG ATCAGTGATG GTGCTGCAGA AACAACTGCT 
    GTCAAGAGTA ACTTCATGAC GAACGGACAG AGCGTAGATG GCTCACAGGA GGAGTATGCT 
    CAGCGACCAA ATTCGTTGGT GATTAAAAAG ATGGAAAAGG CGAAGAAGAG GTGGTGGAAC 
    AGGTTGAGGC ATGGGGGATC GGATGCAGAT GCAAACGAAG GAGGACAGCC TTCTGTAGAG 
    GTGTATCACA ATGGAGAGAA AACAGACGCA GTTGTTGCTA ATGAACCGTC ATCAATTGTG 
    GAGGCTAACG AGACTGACAA TCACGACAAG GTTGTCGGGG AGCATCTAGA ACAAGTTCCG 
    ATCATTGTTG AAACTGGAGA AGATGGCTCT TTGTTGATCA AGTTGCCTCC ACCAAAGTTA 
    CACCTAGAAC AACCCCCGCC GCAATTGGGT GGATCCGACA CTGTGGTGAT CAAAGCTTTG 
    GAGTCAGAGG CTCTCGCGTT GCGTGACGGG GAGGATGATG AGACAATGTA CATTAGGCTT 
    CCCTACCCTG AGCAACGGAG AGTGCTATCA GATGACACGT CAGGCATGAC TCGCGAGGAG 
    TTGAATTCAC CACTACTCGG AGATTATAAT TCGCTTTCAA GTCACCCCAA CTTGATACGA 
    AGGCCACCAC CACCCCTTGC TCAATCTTCC CACGAACGCA AGGTTAACGC AAAGCATCAT 
    CATCTCCCTT ACTCAGCCCA CGAAGAGCAT CATCCCGGCG TGTTGAACGC GTTGCGGAAT 
    GAGTTTGAAT CTTGGAGGGA GAAGCACGGG AAAAAGTATG GATCTAGCGA GGAGAAGGAG 
    GAAAGGTTTC ACGTGTGGAA GAATAACCAC TTTGGCATCA CTGAGAAGAA CATGAAGCAC 
    GGTCCCTGTA GTTTGACTGG CAAGGCTGTG TTTGGCCACA ACGTCTTTTC TGATCTTGCA 
    CCCGAAGAAT TTCAGCAGAG GTATCTCACG GGATACCACG GACCGAAAGC TCACGTCAAA 
    GAGAACCATT CCCACACCCA CCAAGCTGCT GCTGGGGCTC GTGGCGTTTC TAGAGGTCAC 
    AAGAAGAATT CTGATGGAGA AGTAGACCCT CCTCCTCTAG CGTCCGTGAA ACGTCACCCA 
    AGCATCCAAC GCAAGCTTAA TGAATACGCG GAGGAGGTTG AACCTAGTCG CTTACAAGGA 
    ACTAGATACA AATCATCATC ATTTGCAGGT GGATGCCAGT GGTGGGATGT CTCCTGTATG 
    CTTCGATACG TGTTTGGCTA CCAGTACATT GGAGGAACGA GAGAGCCCGT CTACGATGAA 
    AGCAGTTATC CTTCAGCATT GGACTGGCGT AACCTCGGTG TAGTATCAAG TGTTCACGCT 
    CAAGGAAGTT GTGGCGCTTG TTGGGCCATC ACTGCAGTGG AGACGATTGA GTCTGCCTAC 
    GCTATTGCAA CTGGCAATCT TCTTGACCTT TCCGAGGATG AAGTAATCGC TTGCGACGGT 
    TCCTGCGAGA TGTGCAACGG AGGATGGCCT CAGAATGCCT ACAAATACGT GATGAAACAT 
    GGAGGTCTTC CTGTGCAGAG CTCCAACTAT GATGGAGACT TTCTCTCTTC AGTAACTGCA 
    GTGTTGGCTG GAGAGAGTTA CGATGTTTCG GAATATGAGA TGTCGTCTTA CTTTGCAAAG 
    ACATGCCCGT CTGGAGTGCG AGAGGGTGGC AACGGAAATG CTGCCGAAGA TGGTGACAAT 
    TCCAAGTCTG CGAGCCAAGA CTACTCGTCC AACTCAGGAG CCGCCCGTTA TGGCAAAATC 
    AAGGGATACG GATACGCAAC CAAGCGTTGC ATTTGCTATA CCGACGGCAG TGGATGTGAT 
    TGCAACGATC AAAACGAAAA GACTGCCGTC CTAAATGTCG CGTCTTACGG ACCCGCCGCC 
    GTCTGTCTGG AAGCCTCCCT TTGGCAAAGC TATGAAGGCG GTATCATGAC TGCCGATATC 
    GGGTGTAGCT CTGGCTTCTT GGACATGAAC CACTGCGTTG AAGTTGTAGG CTATGCATTC 
    ACTGACGGCA ATGACAACGA CGGAAATGGA GATCAGAAGA GTGGAAGTAG AGATGGTGGA 
    GGCGAAATAC GTGAAGGGTA CTGGATCGTC AAGAATCAAT GGTCTAACTA CTGGGGCATG 
    AATGGCTATG CGTGGTTAAA AATGGGTTCC AACACGTGTG GCATTTTGAA TGATATGACT 
    CAGGTCTACA TGGAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kröger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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