ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » THAPSDRAFT_8235 cDNA ORF clone

THAPSDRAFT_8235 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPSDRAFT_8235 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPSDRAFT_8235 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf03984 XM_002292517.1
Latest version!		 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    THAPSDRAFT_8235 ( XM_002292517.1 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002292553.1 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OTf03984
    Clone ID Related Accession (Same CDS sequence) XM_002292517.1
    Accession Version XM_002292517.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2286bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Thalassiosira pseudonana CCMP1335
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012073). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    ATGATCACCA CCGCCACCAA GCATGCACTT CAGTGCGGTG ACTACACGGA AGCATGGAAG 
    GAGTGGAATC GTGGTACCGA CGCACAAAAA ACCTGGAGAG ACTGGAAAAG TCACTGGACT 
    CGGGCTTTCA ACGAGAACAG AGCCATCCAA CGACTCACCG GAAACAGTTT CCGAGCCAAT 
    GCCACCATCG AAACTGAACT GTCAGATCAA TTGGTGACTT CCCTTGACAA TCTTGCCTAC 
    GCAGCTGTTC AGAAAAACGA CACAATTGAG AAGTTTATCG AAACGATAAA ACAGCAACAA 
    GATACAATCC ACAAACTTCA GGCACAGAAT GGAGAACTGA TGATGAAACT GCTCGGAGGA 
    CAATCTGCAG CTGACACAGG TGACAAGAAA GGTGGAACGA CTGGAGGAAC ACATGCTTGG 
    GATCCCTCGG GATACTGCTG GACTCATGGA TACAAGGTGA AGAAGGGGCA CAACAGCAAA 
    ACTTGCAAAA CTCGTGGGGA AGGGCATCAG GAAACAGTTA ACGTGGTTAA AGCTAATATA 
    CCCTTATTAT GCTCATCAAC TATATTTTCT GGCTGTGCCA ATCCACCCAA TCTCAACACC 
    ACCGCGTTGC TCGATACAGC AGCGAACATC TCTCTGTTGG CCAATGGAGC TCCCTCCGAA 
    CGAGCCAACT CGCAACTGAC TCCGAAATCA GTAATGCAAC CAAAAGGAGA CAGACTGTTC 
    ACAACAGAAA CTCTGCTCCT CCTCCTCAAC AAAGTCCCTC TGGAAGCACG TGAAGCTCAT 
    CGTGCCCCTG GTATCACCAA CAACCTTCTC TCTGCCTCTG CTCTCGCGGA TGCTGGCTGC 
    GAGCTCTTCT TTCACCAAAC AGGATGCGAA GTCTCTCTCA ACGGAGAAAT CATCTTGCGA 
    GGGTGGAGAG ATCCAGACAC TCGCCTCTGG CGTGTCTCGC TTCTCGCCGA CGGCAGCAAC 
    TCCATTGTTC CTGCCGAGCA AGACATCGTC CAATCTCCAA CGGTGAACGG CATCTACGAA 
    TGCGAGAACA CAGGCGATCT TATTCAGTTC TACTATGCTA CTATGGGTTA TCCAGTTCTA 
    TCTACTTGGA CAAAGGCAAT CGATAAAGGC TACTTCCGAG GGTGGAGGGG GCTAACATCA 
    GATCGAGTTC GGCGTTTCAT CAAGCCCAAC GAACAATGTG AGCAAGGTCA CATGGATCAA 
    CGAAGGACAG GCATCCGATC CACGAAGTCA TCACATGCAG TTCCTCCACC CGACATTGTC 
    GACACCATGG AAGAACCAAC ACAAGCTCCG CAGAACGATA AAACCAACAT GGTATTCATG 
    ACAATCGCCG AAGCCGAGGG ACAATTGTTC ACCGACCAAA CCGGCCGTTT CCCCGTCACG 
    TCCAACAGAG GGAACAACTA CATTGTTTTG TTCTACGTTG TCGACGCAAA CTTCATCAAG 
    TCCTATCCCA TCAAGTCTCG CCATCGAACG GAACTTCTCA AGGCGTACGA TGATGTCTAC 
    AAATACCTCT GCATCCGAGG GTACCGTCCT AAACTCCATC GTCTGGACAA CGAAACGTCA 
    AAAGATGTTG AGGATTTTAT TGCTGAGCAA AATGCAAAAC ATCAATACAC TCCACCTGAT 
    ATTCACAGAA CCAACATTGC CGAACGGATG ATCCGAACGT GGAAGAACCA CATGTGTGCT 
    GTGCGAGCAG GCACACCCAA AACTTACCGC CTTTCCAATT GGTGCAAGGA CCTTGAGCAA 
    GTCGACATGA CACTAAACAT GATGAGACCC TGCACCCAAA ATCCAAACCT TTCAGCTTAC 
    GAGGCCATGG AGGGCATGTT TTCTTTCGAT GCCACGCCAA TGGCCCCTAT TGGCACAGAA 
    TGCATGATCC ACGTGAAACC ATCCAAACGG CACACCTGGG GCTATCATTC CATGAAGGCT 
    TGGTACTTCG CTCCAGCTCT AAAACACTAT CGATGTATCA AAGTTGTCAC GGACGCAGGA 
    GCGGTGAGAA CCACAGACAC GTTCAAATTT TTACATCACA CCTTACCTGT CCCAAAGGTG 
    TCGTCCACCA ATCGAATTGT CAAGGCCACC AAACACCTTC GTCAAGCCAT CGACGACAGC 
    ACTACCACTG CACCAGATGA ACTGCAAGCC ATCGAAAATC TGCGTGCGCT CCTCCTTGGC 
    AGTCCTCAGC CACCTCCCCT ACCGGAAACA GTTGTCCAAC CCGCTCTGTT CAAACTGGCT 
    CCCCAACACG CAAACCATCT CACCGGCAGA GCCCTCATGC CATCCCTTTC AACGATGATG 
    AATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002292553.1
    CDS1..2286
    Translation

    Target ORF information:

    RefSeq Version XM_002292517.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002292517.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    ATGATCACCA CCGCCACCAA GCATGCACTT CAGTGCGGTG ACTACACGGA AGCATGGAAG 
    GAGTGGAATC GTGGTACCGA CGCACAAAAA ACCTGGAGAG ACTGGAAAAG TCACTGGACT 
    CGGGCTTTCA ACGAGAACAG AGCCATCCAA CGACTCACCG GAAACAGTTT CCGAGCCAAT 
    GCCACCATCG AAACTGAACT GTCAGATCAA TTGGTGACTT CCCTTGACAA TCTTGCCTAC 
    GCAGCTGTTC AGAAAAACGA CACAATTGAG AAGTTTATCG AAACGATAAA ACAGCAACAA 
    GATACAATCC ACAAACTTCA GGCACAGAAT GGAGAACTGA TGATGAAACT GCTCGGAGGA 
    CAATCTGCAG CTGACACAGG TGACAAGAAA GGTGGAACGA CTGGAGGAAC ACATGCTTGG 
    GATCCCTCGG GATACTGCTG GACTCATGGA TACAAGGTGA AGAAGGGGCA CAACAGCAAA 
    ACTTGCAAAA CTCGTGGGGA AGGGCATCAG GAAACAGTTA ACGTGGTTAA AGCTAATATA 
    CCCTTATTAT GCTCATCAAC TATATTTTCT GGCTGTGCCA ATCCACCCAA TCTCAACACC 
    ACCGCGTTGC TCGATACAGC AGCGAACATC TCTCTGTTGG CCAATGGAGC TCCCTCCGAA 
    CGAGCCAACT CGCAACTGAC TCCGAAATCA GTAATGCAAC CAAAAGGAGA CAGACTGTTC 
    ACAACAGAAA CTCTGCTCCT CCTCCTCAAC AAAGTCCCTC TGGAAGCACG TGAAGCTCAT 
    CGTGCCCCTG GTATCACCAA CAACCTTCTC TCTGCCTCTG CTCTCGCGGA TGCTGGCTGC 
    GAGCTCTTCT TTCACCAAAC AGGATGCGAA GTCTCTCTCA ACGGAGAAAT CATCTTGCGA 
    GGGTGGAGAG ATCCAGACAC TCGCCTCTGG CGTGTCTCGC TTCTCGCCGA CGGCAGCAAC 
    TCCATTGTTC CTGCCGAGCA AGACATCGTC CAATCTCCAA CGGTGAACGG CATCTACGAA 
    TGCGAGAACA CAGGCGATCT TATTCAGTTC TACTATGCTA CTATGGGTTA TCCAGTTCTA 
    TCTACTTGGA CAAAGGCAAT CGATAAAGGC TACTTCCGAG GGTGGAGGGG GCTAACATCA 
    GATCGAGTTC GGCGTTTCAT CAAGCCCAAC GAACAATGTG AGCAAGGTCA CATGGATCAA 
    CGAAGGACAG GCATCCGATC CACGAAGTCA TCACATGCAG TTCCTCCACC CGACATTGTC 
    GACACCATGG AAGAACCAAC ACAAGCTCCG CAGAACGATA AAACCAACAT GGTATTCATG 
    ACAATCGCCG AAGCCGAGGG ACAATTGTTC ACCGACCAAA CCGGCCGTTT CCCCGTCACG 
    TCCAACAGAG GGAACAACTA CATTGTTTTG TTCTACGTTG TCGACGCAAA CTTCATCAAG 
    TCCTATCCCA TCAAGTCTCG CCATCGAACG GAACTTCTCA AGGCGTACGA TGATGTCTAC 
    AAATACCTCT GCATCCGAGG GTACCGTCCT AAACTCCATC GTCTGGACAA CGAAACGTCA 
    AAAGATGTTG AGGATTTTAT TGCTGAGCAA AATGCAAAAC ATCAATACAC TCCACCTGAT 
    ATTCACAGAA CCAACATTGC CGAACGGATG ATCCGAACGT GGAAGAACCA CATGTGTGCT 
    GTGCGAGCAG GCACACCCAA AACTTACCGC CTTTCCAATT GGTGCAAGGA CCTTGAGCAA 
    GTCGACATGA CACTAAACAT GATGAGACCC TGCACCCAAA ATCCAAACCT TTCAGCTTAC 
    GAGGCCATGG AGGGCATGTT TTCTTTCGAT GCCACGCCAA TGGCCCCTAT TGGCACAGAA 
    TGCATGATCC ACGTGAAACC ATCCAAACGG CACACCTGGG GCTATCATTC CATGAAGGCT 
    TGGTACTTCG CTCCAGCTCT AAAACACTAT CGATGTATCA AAGTTGTCAC GGACGCAGGA 
    GCGGTGAGAA CCACAGACAC GTTCAAATTT TTACATCACA CCTTACCTGT CCCAAAGGTG 
    TCGTCCACCA ATCGAATTGT CAAGGCCACC AAACACCTTC GTCAAGCCAT CGACGACAGC 
    ACTACCACTG CACCAGATGA ACTGCAAGCC ATCGAAAATC TGCGTGCGCT CCTCCTTGGC 
    AGTCCTCAGC CACCTCCCCT ACCGGAAACA GTTGTCCAAC CCGCTCTGTT CAAACTGGCT 
    CCCCAACACG CAAACCATCT CACCGGCAGA GCCCTCATGC CATCCCTTTC AACGATGATG 
    AATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kröger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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