ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » ATH1 cDNA ORF clone

ATH1 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following ATH1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ATH1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf05967 XM_002286233.1
Latest version!		 Thalassiosira pseudonana CCMP1335 ATP dependent RNA helicase (ATH1), partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $643.30
$919.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    ATH1 ( XM_002286233.1 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002286269.1 Thalassiosira pseudonana CCMP1335 ATP dependent RNA helicase (ATH1), partial mRNA.
    Price & Availability↑
    CloneID OTf05967
    Clone ID Related Accession (Same CDS sequence) XM_002286233.1
    Accession Version XM_002286233.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3576bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Thalassiosira pseudonana CCMP1335
    Product ATP dependent RNA helicase
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012064). COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    ATGGCACCAC CTCTCCCCAA CGCCGACGGC ACCACCACCT CTACCAAGAA GAAGAAGAAA 
    AATACCGAGG ATGAACCGCC CCTAACCGCA GTTGAACGTC TCCAATCACT CAACCTCGTC 
    TCCCGCGTAG CATCCGAATG GAACAACCAC CTAGGCATAT CCGATCGTAC CCTCGCCGAG 
    TTTGTCATCA ACCTGGCAGA GAAGAGGATT AAATCCTTCT TAAAAGATGA GTTTGTCAAG 
    GAGGATGGAT CACTATACAA CGTGGCTCTA ACGGATGGAT CTTCTGATAA GATTCGTGTA 
    GCTCTCATGG ATGATAAGAA GAAGGTCAAG AGGGCCAAGT CACAGAAACA GCAGAGAGGT 
    GATGGATTGG AAGTGCCTTT GGAGCAGGGC TTTTACGAGC ACGATAAGGA CACGAATGGG 
    GATGGAGATA TGAGTAATGT TCACCAGAGG TCTAGAAACA AGAGGCGTTG GGACGATAAT 
    GATGCCAAAG ATGGAAATGG CGAACCAAAG GACTCGGGAA AGCGTGCAAT GTCTAATTTG 
    CCTGCGTGGA TGACGCAAAA GTCTGACGAA GAAAAGAAGT CGGCCGACGT CAGAGAGACT 
    AGTCAGCGTT CCAAATCTAA TCTTCCTGCA TGGATGACGA AGCAACAATC GGGGGGAGCC 
    AAAGATGGAT TGCAACTGTA TCAAATCTTT AGGGGAACGG TACAACGTGT ACTTGATTTT 
    GGTATCGTTG TTGATTTCAA CGTTCCTGGT AACAGTGAAA AGGCTTCGGG CATGGTGCAT 
    CTCACACACG TGACAAAGAA TCGTATTGAA AAGCCAAAAG ATGCAGGTTT TCGTCCTGGG 
    CAGTCAGTGT ATGTGAAACT TATCTCCATC GGTAAACGGG GCGCTTCGGC AGGTGCCGGA 
    GAAGGAGGGT TGATGCTAAG TCTCAAGGAT GTGGACCAGA GTTCGGGGAA GGACCTCATG 
    CCTCATCGAT CTGCTGCAGC AATGGGGACT GGGGACTATT CTAGCAAATC CGATACAGCG 
    AGTAACACTG CGGCATCGGC ATCTGCAGCT GTTGAAGAGG AGGCGGATAA TATCACACAA 
    CGTCAATTGC AGGGTTTGAC AGAGCAAGAA CTGTTTGAGG CACAGCAGTT GATTCGATCT 
    GGAGTGTTGC CCGTGGAACA ATATCCAACG TTTGACAATG AGGGGGGGTT GGGAATGCTT 
    GCACAGGAAA CGACAGAAGA ACAAACGGAG GTGGAATTGG CTGACTTTGA ACCATCCTTT 
    TTGCGTGGTC AGACTCGTCG TTCGGGGAGG GACTTGGAGC CGATTCGTAT AGTAAAGAAT 
    CCTGACGGTT CTTTGCAGCG CGCGGCGATG CAACAGGGAA CGTTGGCCAA AGAACGTCGT 
    GAGCTGCGCC AAGCACAAGC CAATCAGTTG GTAGATTCTA TTCCCAAAGA CCTCAATCGT 
    CCGTGGGAGG ACCCACTTCC TGAGGCCGGA GAACGTCATT TCGCACAGGA GCTGCGTAGT 
    ATCAACATGA GTGCCTTTGA TGGAGCACCA GAGTGGAAAC AAAAGGCTGA GAGTAAGACC 
    TTGTCGTACG GTATCATCTC CAACAGGTCA ATCAAAGATC AGAGGGAGAG TTTGCCAATC 
    TACAGGTTGA AGCCGGAGTT GATGCGTGCA ATGTCCGAGA ATCAGGTGCT TGTCGTGATT 
    GGTGAAACGG GTTCCGGAAA GACGACCCAA ATGACTCAGT ACATGCACGA ACTCGGCATT 
    ACAAAGAATG GAATGATTGG ATGTACCCAG CCGAGGCGTG TCGCCGCAGT CTCAGTCGCC 
    AAACGTGTCT CAGAAGAGTT TGGATGTACT CTGGGGGAAG AGGTTGGTTA CTCCATTCGT 
    TTTGATGACG CCACGTCCAA GGAAACAATC ATCAAGTACA TGACTGACGG TATGCTCATG 
    AGGGAATATC TAGCTGACAA TGACTTGAAG AGGTATGGGG CACTGATGTT GGATGAGGCA 
    CACGAACGCA CAATCCACAC GGATGTTTTG TTCGGATTGT TGAAGGATCT CATGCGGCGT 
    AGGCCAGACA TGAAGCTCAT CGTCACGTCG GCTACGTTGG ACGCTGAAAA GTTCTCTAGC 
    TATTTCTTTG AATGCCCTAT CTTTACGATT CCTGGAAGGA CGTTCCCCGT CGAAATCCTC 
    TACACCAAAG AGCCCGAAAG TGACTACCTT GATGCAGCAT TGATCACGAT CATGCAGATC 
    CACCTATCAG AACCAGCTGG AGACATTCTT CTCTTCTTGA CGGGCCAGGA GGAGATTGAT 
    ACGGCATGCG AGACATTGTT CAGCCGTATG AAGGCACTCG GAGACCTTGC ACCTGAGCTG 
    ATTATCCTTC CCGTGTACTC GTCTCTTCCT TCCGAGATGC AATCACGAAT CTTTGAACCG 
    GCTCCTCCGG GAACACGAAA GTGTATTGTT GCTACCAACA TTGCAGAGGC TTCTCTTACT 
    ATTGACGGTA TCTACTATGT CGTGGATCCT GGCTTCTCGA AGCAAAAGGC CTTCAATGCA 
    AAGCTGGGCA TGGACTCACT TGTTGTCACT CCAATCTCCC AAGCCAGTGC TCGTCAGAGG 
    GCTGGTCGTG CTGGACGTAC CGGGCCGGGA AAGTGTTATC GACTCTATAC TGAAATGGCG 
    TACAGGAATG AGATGCTTCC GACCAACATC CCCGAGATTC AGCGAACCAA CTTGGGTAAT 
    GTCGTTCTGC AATTGAAAGC AATGGGAATC AACGATTTGT TGGGATTTGA CTTTATGGAT 
    CCACCTCCAG TGGCCACTCT TGTTGGTGCA ATGGAAGGGC TGAATGCTCT TGGAGCATTG 
    GACGACGAAG GATTGCTGAC TAGGCTCGGA CGCAAGATGG CAGAGTTTCC CTTGGAACCC 
    AATCTCTCCA AAATGCTGTT GCTCTCGGTG GATTTGGGCT GCTCTGACGA GATTCTTACA 
    ATCACTTCCT TGCTAAGTGT TGACAATCCC TTCTATCGTC CTCGTGATAA GCAAGGGCAG 
    GCTGATATGA AGAAGGCAAA GTTCCACCAA GCAGAAGGAG ATCACTTGAC GTTGCTTGCT 
    GTGTACAAAG CATGGGAGGC ATCCAAGTTT AGCAACCCTT GGTGCTTTGA GAACTTTATC 
    CAAGCACGAA GTATGAAACG TGCACAAGAC GTGAGGAAGC AGCTTGTAAC CATCATGGAC 
    AGATACAAGC TCGACATTTT GAGTTCCGGA AAGAACTACA AGAAGATTTG CATGGCAATC 
    ACGGCTGGCT TCTTCACCAA CGCAGCAAAG AAGCATCCTC AGGAAGGTTA TCTTACGTTG 
    GTTGATCAAA ATCCTGTCTA CATCCATCCA TCATCTGCTG TATTCAACAA GAATCCCGAA 
    TGGGTTATTT ATCACGAATT GGTGTTAACA ACGAAGGAGT ACATGAGAAA TGTCATGGTC 
    ATTGACGCTA AGTGGTTGAT CGAGCTGGCA CCATCCTTCT ACAAGAAGGC CGACCCGAAT 
    AAGATGACCA AGTCCAAACG CATGGAGAAG ATTGAGCCCC TATTCGATCG TTTCAATCCA 
    AAGGATTCGT GGAGGTTATC GAGGCGCAAG GGATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002286269.1
    CDS1..3576
    Translation

    Target ORF information:

    RefSeq Version XM_002286233.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 ATP dependent RNA helicase (ATH1), partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002286233.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    ATGGCACCAC CTCTCCCCAA CGCCGACGGC ACCACCACCT CTACCAAGAA GAAGAAGAAA 
    AATACCGAGG ATGAACCGCC CCTAACCGCA GTTGAACGTC TCCAATCACT CAACCTCGTC 
    TCCCGCGTAG CATCCGAATG GAACAACCAC CTAGGCATAT CCGATCGTAC CCTCGCCGAG 
    TTTGTCATCA ACCTGGCAGA GAAGAGGATT AAATCCTTCT TAAAAGATGA GTTTGTCAAG 
    GAGGATGGAT CACTATACAA CGTGGCTCTA ACGGATGGAT CTTCTGATAA GATTCGTGTA 
    GCTCTCATGG ATGATAAGAA GAAGGTCAAG AGGGCCAAGT CACAGAAACA GCAGAGAGGT 
    GATGGATTGG AAGTGCCTTT GGAGCAGGGC TTTTACGAGC ACGATAAGGA CACGAATGGG 
    GATGGAGATA TGAGTAATGT TCACCAGAGG TCTAGAAACA AGAGGCGTTG GGACGATAAT 
    GATGCCAAAG ATGGAAATGG CGAACCAAAG GACTCGGGAA AGCGTGCAAT GTCTAATTTG 
    CCTGCGTGGA TGACGCAAAA GTCTGACGAA GAAAAGAAGT CGGCCGACGT CAGAGAGACT 
    AGTCAGCGTT CCAAATCTAA TCTTCCTGCA TGGATGACGA AGCAACAATC GGGGGGAGCC 
    AAAGATGGAT TGCAACTGTA TCAAATCTTT AGGGGAACGG TACAACGTGT ACTTGATTTT 
    GGTATCGTTG TTGATTTCAA CGTTCCTGGT AACAGTGAAA AGGCTTCGGG CATGGTGCAT 
    CTCACACACG TGACAAAGAA TCGTATTGAA AAGCCAAAAG ATGCAGGTTT TCGTCCTGGG 
    CAGTCAGTGT ATGTGAAACT TATCTCCATC GGTAAACGGG GCGCTTCGGC AGGTGCCGGA 
    GAAGGAGGGT TGATGCTAAG TCTCAAGGAT GTGGACCAGA GTTCGGGGAA GGACCTCATG 
    CCTCATCGAT CTGCTGCAGC AATGGGGACT GGGGACTATT CTAGCAAATC CGATACAGCG 
    AGTAACACTG CGGCATCGGC ATCTGCAGCT GTTGAAGAGG AGGCGGATAA TATCACACAA 
    CGTCAATTGC AGGGTTTGAC AGAGCAAGAA CTGTTTGAGG CACAGCAGTT GATTCGATCT 
    GGAGTGTTGC CCGTGGAACA ATATCCAACG TTTGACAATG AGGGGGGGTT GGGAATGCTT 
    GCACAGGAAA CGACAGAAGA ACAAACGGAG GTGGAATTGG CTGACTTTGA ACCATCCTTT 
    TTGCGTGGTC AGACTCGTCG TTCGGGGAGG GACTTGGAGC CGATTCGTAT AGTAAAGAAT 
    CCTGACGGTT CTTTGCAGCG CGCGGCGATG CAACAGGGAA CGTTGGCCAA AGAACGTCGT 
    GAGCTGCGCC AAGCACAAGC CAATCAGTTG GTAGATTCTA TTCCCAAAGA CCTCAATCGT 
    CCGTGGGAGG ACCCACTTCC TGAGGCCGGA GAACGTCATT TCGCACAGGA GCTGCGTAGT 
    ATCAACATGA GTGCCTTTGA TGGAGCACCA GAGTGGAAAC AAAAGGCTGA GAGTAAGACC 
    TTGTCGTACG GTATCATCTC CAACAGGTCA ATCAAAGATC AGAGGGAGAG TTTGCCAATC 
    TACAGGTTGA AGCCGGAGTT GATGCGTGCA ATGTCCGAGA ATCAGGTGCT TGTCGTGATT 
    GGTGAAACGG GTTCCGGAAA GACGACCCAA ATGACTCAGT ACATGCACGA ACTCGGCATT 
    ACAAAGAATG GAATGATTGG ATGTACCCAG CCGAGGCGTG TCGCCGCAGT CTCAGTCGCC 
    AAACGTGTCT CAGAAGAGTT TGGATGTACT CTGGGGGAAG AGGTTGGTTA CTCCATTCGT 
    TTTGATGACG CCACGTCCAA GGAAACAATC ATCAAGTACA TGACTGACGG TATGCTCATG 
    AGGGAATATC TAGCTGACAA TGACTTGAAG AGGTATGGGG CACTGATGTT GGATGAGGCA 
    CACGAACGCA CAATCCACAC GGATGTTTTG TTCGGATTGT TGAAGGATCT CATGCGGCGT 
    AGGCCAGACA TGAAGCTCAT CGTCACGTCG GCTACGTTGG ACGCTGAAAA GTTCTCTAGC 
    TATTTCTTTG AATGCCCTAT CTTTACGATT CCTGGAAGGA CGTTCCCCGT CGAAATCCTC 
    TACACCAAAG AGCCCGAAAG TGACTACCTT GATGCAGCAT TGATCACGAT CATGCAGATC 
    CACCTATCAG AACCAGCTGG AGACATTCTT CTCTTCTTGA CGGGCCAGGA GGAGATTGAT 
    ACGGCATGCG AGACATTGTT CAGCCGTATG AAGGCACTCG GAGACCTTGC ACCTGAGCTG 
    ATTATCCTTC CCGTGTACTC GTCTCTTCCT TCCGAGATGC AATCACGAAT CTTTGAACCG 
    GCTCCTCCGG GAACACGAAA GTGTATTGTT GCTACCAACA TTGCAGAGGC TTCTCTTACT 
    ATTGACGGTA TCTACTATGT CGTGGATCCT GGCTTCTCGA AGCAAAAGGC CTTCAATGCA 
    AAGCTGGGCA TGGACTCACT TGTTGTCACT CCAATCTCCC AAGCCAGTGC TCGTCAGAGG 
    GCTGGTCGTG CTGGACGTAC CGGGCCGGGA AAGTGTTATC GACTCTATAC TGAAATGGCG 
    TACAGGAATG AGATGCTTCC GACCAACATC CCCGAGATTC AGCGAACCAA CTTGGGTAAT 
    GTCGTTCTGC AATTGAAAGC AATGGGAATC AACGATTTGT TGGGATTTGA CTTTATGGAT 
    CCACCTCCAG TGGCCACTCT TGTTGGTGCA ATGGAAGGGC TGAATGCTCT TGGAGCATTG 
    GACGACGAAG GATTGCTGAC TAGGCTCGGA CGCAAGATGG CAGAGTTTCC CTTGGAACCC 
    AATCTCTCCA AAATGCTGTT GCTCTCGGTG GATTTGGGCT GCTCTGACGA GATTCTTACA 
    ATCACTTCCT TGCTAAGTGT TGACAATCCC TTCTATCGTC CTCGTGATAA GCAAGGGCAG 
    GCTGATATGA AGAAGGCAAA GTTCCACCAA GCAGAAGGAG ATCACTTGAC GTTGCTTGCT 
    GTGTACAAAG CATGGGAGGC ATCCAAGTTT AGCAACCCTT GGTGCTTTGA GAACTTTATC 
    CAAGCACGAA GTATGAAACG TGCACAAGAC GTGAGGAAGC AGCTTGTAAC CATCATGGAC 
    AGATACAAGC TCGACATTTT GAGTTCCGGA AAGAACTACA AGAAGATTTG CATGGCAATC 
    ACGGCTGGCT TCTTCACCAA CGCAGCAAAG AAGCATCCTC AGGAAGGTTA TCTTACGTTG 
    GTTGATCAAA ATCCTGTCTA CATCCATCCA TCATCTGCTG TATTCAACAA GAATCCCGAA 
    TGGGTTATTT ATCACGAATT GGTGTTAACA ACGAAGGAGT ACATGAGAAA TGTCATGGTC 
    ATTGACGCTA AGTGGTTGAT CGAGCTGGCA CCATCCTTCT ACAAGAAGGC CGACCCGAAT 
    AAGATGACCA AGTCCAAACG CATGGAGAAG ATTGAGCCCC TATTCGATCG TTTCAATCCA 
    AAGGATTCGT GGAGGTTATC GAGGCGCAAG GGATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kröger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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