Gene Symbol | TNRC6B |
Entrez Gene ID | 102159442 |
Full Name | trinucleotide repeat containing 6B |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Learn More
Learn More
Learn More
Learn More
Learn More
ORF » Species Summary » Sus scrofa » TNRC6B cDNA ORF clone
Gene Symbol | TNRC6B |
Entrez Gene ID | 102159442 |
Full Name | trinucleotide repeat containing 6B |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
mRNA | Protein | Name |
---|---|---|
XM_021092846.1 | XP_020948505.1 | trinucleotide repeat-containing gene 6B protein isoform X3 |
XM_013997497.1 | XP_013852951.1 | trinucleotide repeat-containing gene 6B protein-like |
XM_021092847.1 | XP_020948506.1 | trinucleotide repeat-containing gene 6B protein isoform X4 |
XM_021092843.1 | XP_020948502.1 | trinucleotide repeat-containing gene 6B protein isoform X1 |
XM_021092845.1 | XP_020948504.1 | trinucleotide repeat-containing gene 6B protein isoform X2 |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following TNRC6B gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TNRC6B cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe35436 | |
Clone ID Related Accession (Same CDS sequence) | XM_013997497.1 | |
Accession Version | XM_013997497.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 729bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | trinucleotide repeat-containing gene 6B protein-like | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003610198.1) and transcript sequence (AK235718.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 400 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGGATGACA CAGGAGCATC GACCACAGGC TGGGGGACCG CACCCTCCAA TGCTCCAAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013852951.1 |
CDS | 328..1056 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGATGACA CAGGAGCATC GACCACAGGC TGGGGGACCG CACCCTCCAA TGCTCCAAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe250043 | |
Clone ID Related Accession (Same CDS sequence) | XM_021092843.1 | |
Accession Version | XM_021092843.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5568bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | trinucleotide repeat-containing gene 6B protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010447.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCTCGC GAGGTTTTGG TTTTTGCACT GAATGTAGTC TAGACTCATT GTCACGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020948502.1 |
CDS | 50..5617 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCCTCGC GAGGTTTTGG TTTTTGCACT GAATGTAGTC TAGACTCATT GTCACGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe250044 | |
Clone ID Related Accession (Same CDS sequence) | XM_021092845.1 | |
Accession Version | XM_021092845.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5436bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | trinucleotide repeat-containing gene 6B protein isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010447.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAAACCA ATGAGGGAGA AGTATCAGAG GAAAGCAGTT CCAAGGTGGA ACAGGAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020948504.1 |
CDS | 742..6177 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCAAACCA ATGAGGGAGA AGTATCAGAG GAAAGCAGTT CCAAGGTGGA ACAGGAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe250045 | |
Clone ID Related Accession (Same CDS sequence) | XM_021092846.1 | |
Accession Version | XM_021092846.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5328bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | trinucleotide repeat-containing gene 6B protein isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010447.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGAGAGA AGGAGCAAGA AAGGGAAGAA CAGTTAATGG AAGACAAGAA AAGGAAGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020948505.1 |
CDS | 3921..9248 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGAGAGA AGGAGCAAGA AAGGGAAGAA CAGTTAATGG AAGACAAGAA AAGGAAGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe250046 | |
Clone ID Related Accession (Same CDS sequence) | XM_021092847.1 | |
Accession Version | XM_021092847.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5739bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | trinucleotide repeat-containing gene 6B protein isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010447.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCTCGC GAGGTTTTGG TTTTTGCACT GAATGTAGTC TAGACTCATT GTCACGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020948506.1 |
CDS | 16..5754 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCCTCGC GAGGTTTTGG TTTTTGCACT GAATGTAGTC TAGACTCATT GTCACGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |