Gene Symbol | LOC100523371 |
Entrez Gene ID | 100523371 |
Full Name | apolipoprotein B |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
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ORF » Species Summary » Sus scrofa » LOC100523371 cDNA ORF clone
Gene Symbol | LOC100523371 |
Entrez Gene ID | 100523371 |
Full Name | apolipoprotein B |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001375388.1 | NP_001362317.1 | apolipoprotein B-100 precursor |
XM_021085692.1 | XP_020941351.1 | apolipoprotein B-100 isoform X1 |
NM_001315684.1 | NP_001302613.1 | apolipoprotein B-100 |
Nucleotide sequence and association analysis of pig apolipoprotein-B and LDL-receptor genes.
Pena RN, Cánovas A, Varona L, Díaz I, Gallardo D, Ramírez O, Noguera JL, Quintanilla R
Animal biotechnology20(3)110-23(2009)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
Abundant (A)n.(T)n mononucleotide repeats in the pig genome: linkage mapping of the porcine APOB, FSA, ALOX12, PEPN and RLN loci.
Ellegren H
Animal genetics24(5)367-72(1993 Oct)
Nucleotide sequence encoding the carboxyl-terminal half of apolipoprotein B from spontaneously hypercholesterolemic pigs.
Purtell C, Maeda N, Ebert DL, Kaiser M, Lund-Katz S, Sturley SL, Kodoyianni V, Grunwald K, Nevin DN, Aiello RJ
Journal of lipid research34(8)1323-35(1993 Aug)
Mapping of the porcine apolipoprotein B (APOB) gene to chromosome 3 by fluorescence in situ hybridization.
Sarmiento UM, Kadavil K
Mammalian genome : official journal of the International Mammalian Genome Society4(1)66-7(1993)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC100523371 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100523371 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe245187 | |
Clone ID Related Accession (Same CDS sequence) | NM_001375388.1 , XM_021085692.1 | |
Accession Version | NM_001375388.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 13722bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1571846400000 | |
Organism | Sus scrofa(pig) | |
Product | apolipoprotein B-100 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AEMK02000021.1. On Oct 25, 2019 this sequence version replaced XM_021085692.1. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA103886121, SAMEA103886155 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGGCCCTC CAAGGCCCGC GTCGCTGCTG CTGCTGCTGC TGCTGCTGGC CACCACCTGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001362317.1 |
CDS | 152..13873 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGCCCTC CAAGGCCCGC GTCGCTGCTG CTGCTGCTGC TGCTGCTGGC CACCACCTGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe47140 | |
Clone ID Related Accession (Same CDS sequence) | NM_001315684.1 | |
Accession Version | NM_001315684.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 11649bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1444233600000 | |
Organism | Sus scrofa(pig) | |
Product | apolipoprotein B-100 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from KP641122.1. On Oct 9, 2015 this sequence version replaced XM_013987051.1. ##Evidence-Data-START## Transcript exon combination :: KP641122.1 [ECO:0000332] ##Evidence-Data-END## |
1 | ATGAAAGAAA AGACCTCCTG GGTAGCAGAA GCTGGCTTCT ATCTGATTTA CGGCCCCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001302613.1 |
CDS | 1..11649 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAAAGAAA AGACCTCCTG GGTAGCAGAA GCTGGCTTCT ATCTGATTTA CGGCCCCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe245187 | |
Clone ID Related Accession (Same CDS sequence) | NM_001375388.1 , XM_021085692.1 | |
Accession Version | XM_021085692.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 13722bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | apolipoprotein B-100 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCCCTC CAAGGCCCGC GTCGCTGCTG CTGCTGCTGC TGCTGCTGGC CACCACCTGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020941351.1 |
CDS | 152..13873 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGCCCTC CAAGGCCCGC GTCGCTGCTG CTGCTGCTGC TGCTGCTGGC CACCACCTGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Nucleotide sequence and association analysis of pig apolipoprotein-B and LDL-receptor genes. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |
Abundant (A)n.(T)n mononucleotide repeats in the pig genome: linkage mapping of the porcine APOB, FSA, ALOX12, PEPN and RLN loci. |
Nucleotide sequence encoding the carboxyl-terminal half of apolipoprotein B from spontaneously hypercholesterolemic pigs. |
Mapping of the porcine apolipoprotein B (APOB) gene to chromosome 3 by fluorescence in situ hybridization. |