Gene Symbol | SNCB |
Entrez Gene ID | 100127169 |
Full Name | synuclein beta |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
ORF » Species Summary » Sus scrofa » SNCB cDNA ORF clone
Gene Symbol | SNCB |
Entrez Gene ID | 100127169 |
Full Name | synuclein beta |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
mRNA | Protein | Name |
---|---|---|
NM_001112694.1 | NP_001106164.1 | beta-synuclein |
XM_005661456.2 | XP_005661513.1 | beta-synuclein isoform X1 |
XM_005661456.3 | XP_005661513.1 | beta-synuclein isoform X2 |
XM_021076609.1 | XP_020932268.1 | beta-synuclein isoform X1 |
Molecular cloning, characterization and developmental expression of porcine beta-synuclein.
Larsen K, Frandsen PM, Madsen LB, Bendixen C
Molecular biology reports37(3)1439-49(2010 Mar)
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences.
Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D, Hamasima N, Awata T
Nucleic acids research35(Database issue)D650-3(2007 Jan)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following SNCB gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SNCB cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe05639 | |
Clone ID Related Accession (Same CDS sequence) | NM_001112694.1 , XM_005661456.2 , XM_005661456.3 | |
Accession Version | NM_001112694.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 402bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1470585600000 | |
Organism | Sus scrofa(pig) | |
Product | beta-synuclein | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EF186678.1. ##Evidence-Data-START## Transcript exon combination :: EF186678.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1487398, SAMEA1487420 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGACGTGT TCATGAAGGG CCTGTCCATG GCCAAGGAGG GCGTTGTGGC CGCTGCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001106164.1 |
CDS | 10..411 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGACGTGT TCATGAAGGG CCTGTCCATG GCCAAGGAGG GCGTTGTGGC CGCTGCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe05639 | |
Clone ID Related Accession (Same CDS sequence) | NM_001112694.1 , XM_005661456.2 , XM_005661456.3 | |
Accession Version | XM_005661456.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 402bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | beta-synuclein isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003609624.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005661456.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACGTGT TCATGAAGGG CCTGTCCATG GCCAAGGAGG GCGTTGTGGC CGCTGCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005661513.1 |
CDS | 301..702 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACGTGT TCATGAAGGG CCTGTCCATG GCCAAGGAGG GCGTTGTGGC CGCTGCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe05639 | |
Clone ID Related Accession (Same CDS sequence) | NM_001112694.1 , XM_005661456.2 , XM_005661456.3 | |
Accession Version | XM_005661456.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 402bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | beta-synuclein isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010444.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_005661456.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACGTGT TCATGAAGGG CCTGTCCATG GCCAAGGAGG GCGTTGTGGC CGCTGCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005661513.1 |
CDS | 427..828 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACGTGT TCATGAAGGG CCTGTCCATG GCCAAGGAGG GCGTTGTGGC CGCTGCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe242375 | |
Clone ID Related Accession (Same CDS sequence) | XM_021076609.1 | |
Accession Version | XM_021076609.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 531bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | beta-synuclein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010444.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGCACT CAGGCAACAG CCACCTGAGG GTGTGGGTAC TACATCAGTC GGGGGGACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020932268.1 |
CDS | 2922..3452 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGGCACT CAGGCAACAG CCACCTGAGG GTGTGGGTAC TACATCAGTC GGGGGGACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Molecular cloning, characterization and developmental expression of porcine beta-synuclein. |
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |