Gene Symbol | PDE4B |
Entrez Gene ID | 100037941 |
Full Name | phosphodiesterase 4B |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
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ORF » Species Summary » Sus scrofa » PDE4B cDNA ORF clone
Gene Symbol | PDE4B |
Entrez Gene ID | 100037941 |
Full Name | phosphodiesterase 4B |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_021093174.1 | XP_020948833.1 | cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X4 |
NM_001130019.1 | NP_001123491.1 | cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform 1 |
XM_021093172.1 | XP_020948831.1 | cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X2 |
XM_021093173.1 | XP_020948832.1 | cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X3 |
NM_001130018.2 | NP_001123490.1 | cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform 2 |
XM_021093170.1 | XP_020948829.1 | cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X1 |
Minimizing a QTL region for intramuscular fat content by characterizing the porcine Phosphodiesterase 4B (PDE4B) gene.
Kim JH, Ovilo C, Park EW, Fernndez A, Lee JH, Jeon JT, Lee JG
BMB reports41(6)466-71(2008 Jun)
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences.
Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D, Hamasima N, Awata T
Nucleic acids research35(Database issue)D650-3(2007 Jan)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PDE4B gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PDE4B cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe29714 | |
Clone ID Related Accession (Same CDS sequence) | NM_001130019.1 | |
Accession Version | NM_001130019.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2211bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494864000000 | |
Organism | Sus scrofa(pig) | |
Product | cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EU339284.1. ##Evidence-Data-START## Transcript exon combination :: EU339284.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1487420, SAMEA1876824 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAAGAAAA GCAGGAGTGT GATGACAGTG ACAGCCGATG ATAATGTTAA AGACGATTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001123491.1 |
CDS | 203..2413 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAGAAAA GCAGGAGTGT GATGACAGTG ACAGCCGATG ATAATGTTAA AGACGATTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe29717 | |
Clone ID Related Accession (Same CDS sequence) | NM_001130018.2 | |
Accession Version | NM_001130018.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1692bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494864000000 | |
Organism | Sus scrofa(pig) | |
Product | cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform 2 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EU339285.1. On Aug 31, 2012 this sequence version replaced NM_001130018.1. ##Evidence-Data-START## Transcript exon combination :: EU339285.1, AK346460.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1487420, SAMEA1876824 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAAGGAGC ACGGGGCCAC CTTCAGTAGC GGCGGCATCG GCGGCAGCGG TGACTCGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001123490.1 |
CDS | 65..1756 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAGGAGC ACGGGGCCAC CTTCAGTAGC GGCGGCATCG GCGGCAGCGG TGACTCGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe250279 | |
Clone ID Related Accession (Same CDS sequence) | XM_021093170.1 | |
Accession Version | XM_021093170.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2211bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010448.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGAAAA GCAGGAGTGT GATGACAGTG ACAGCCGATG ATAATGTTAA AGACGATTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020948829.1 |
CDS | 283..2493 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAGAAAA GCAGGAGTGT GATGACAGTG ACAGCCGATG ATAATGTTAA AGACGATTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe250280 | |
Clone ID Related Accession (Same CDS sequence) | XM_021093172.1 | |
Accession Version | XM_021093172.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2166bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010448.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAGCAA AAGATTCTTC AAAAGAACTT ACTGCTTCTG AATCTGAGGT TTGCATAAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020948831.1 |
CDS | 986..3151 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACAGCAA AAGATTCTTC AAAAGAACTT ACTGCTTCTG AATCTGAGGT TTGCATAAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe250281 | |
Clone ID Related Accession (Same CDS sequence) | XM_021093173.1 | |
Accession Version | XM_021093173.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1554bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010448.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAACGC TGGAGGAACT GGACTGGTGC TTAGACCAGC TAGAGACCAT CCAGACCTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020948832.1 |
CDS | 210..1763 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAAACGC TGGAGGAACT GGACTGGTGC TTAGACCAGC TAGAGACCAT CCAGACCTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe250282 | |
Clone ID Related Accession (Same CDS sequence) | XM_021093174.1 | |
Accession Version | XM_021093174.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1512bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010448.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCTGAGG CAAACTATTT ATTATCTGTA TCTTGGGGTT ACATCAAGTT CAAAAGAATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020948833.1 |
CDS | 5881..7392 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCTGAGG CAAACTATTT ATTATCTGTA TCTTGGGGTT ACATCAAGTT CAAAAGAATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Minimizing a QTL region for intramuscular fat content by characterizing the porcine Phosphodiesterase 4B (PDE4B) gene. |
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |