ORF » Species Summary » Populus trichocarpa » POPTR_0002s01080g cDNA ORF clone

POPTR_0002s01080g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0002s01080g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0002s01080g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa06660 XM_002301884.2
Latest version!		 Populus trichocarpa catalase isozyme 1 (LOC7496858), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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OPa06660 XM_002301884.1 Populus trichocarpa catalase family protein (POPTR_0002s01080g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0002s01080g ( XM_002301884.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002301920.1 Populus trichocarpa catalase isozyme 1 (LOC7496858), mRNA.
    Price & Availability↑
    CloneID OPa06660
    Clone ID Related Accession (Same CDS sequence) XM_002301884.2 , XM_002301884.1
    Accession Version XM_002301884.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1479bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product catalase isozyme 1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002301884.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGATCCCT ACAAGTACCG TCCATCAAGC GCTTTCGGTA CTCCATACTG GACTACAAAT 
    TCTGGAGCTC CGGTTTGGAA CAACAACTCG TCTTTGACCG TTGGATCTAG AGGTCCAATC 
    CTCCTTGAGG ATTACCATCT GGTGGAGAAG CTTGCCAATT TTGACAGGGA GAGGATTCCA 
    GAGCGTGTTG TCCATGCTAG GGGAGCCAGT GCAAAGGGTT TCTTTGAGGT TACCCATGAT 
    ATCTCTGGCC TCACATGTGC TGATTTTCTC CGGGCTCCTG GAGTTCAGAC ACCTGTCATT 
    GTCCGCTTCT CCACAGTTAT CCATGAGCGT GGCAGCCCTG AAACCCTGAG GGATCCACGT 
    GGATTTGCAG TGAAGTTTTA CACCAGAGAG GGTAACTTTG ATCTCGTGGG AAACAATTTC 
    CCTGTCTTCT TCATCCGTGA TGGAATGAAA TTCCCAGACA TGGTGCATGC CCTTAAGCCC 
    AACCCTAAGT CTCATATTCA GGAGAACTGG AGGATTCTTG ACTTCTTCTC CCACCATCCT 
    GAAAGTTTGC ACATGTTCTC CTTCCTATTT GATGATTTGG GTGTTCCACA AGATTATAGA 
    CATATGGAAG GCTCTGGTGT TAACACCTAC ATGTTGATCA ACAAGGCTGG AAAAGCCCAT 
    TATGTGAAAT TTCATTGGAA ACCTACTTGT GGTGTGAAAT GTTTGTTGGA GGATGAGGCA 
    GTTAAAGTAG GAGGCACAAA TCACAGTCAT GCTACTCAGG ATCTATATGA CTCCATTGCA 
    GCTGGCACCT ATCCTGAGTG GAAACTTTTC ATCCAGACAA TTGATCCTGA CCATGAAGCC 
    AGGTTTGATT TTGACCCACT TGATGTAACC AAGACCTGGC CTGAGGATAT CTTGCCCCTG 
    CAGCCAGTTG GTCGCTTGGT CTTGAATAAG AACATCGACA ACTTCTTTGC TGAAAATGAG 
    CAGCTTGCTT TCTGCCCTGC TATTGTGGTT CCTGGTGTTT ACTATTCAGA TGACAAGCTA 
    CTCCAGACTC GAATCTTCTC CTATGCTGAT ACCCAGAGGC ACCGTCTTGG ACCAAACTAT 
    CTGCAGCTCC CTGCTAATGC TCCCAAGTGT GCTCATCATA ACAATCACCA TGAAGGTTTC 
    ATGAATTTCA TGCACAGGGA TGAGGAGGTC AACTATTTCC CATCAAGGTA TGATCCAGTT 
    CGCCATGCTG AGAGTTTCCC CATTCCTCCT GCTGTCTGCA GTGGAAAGCG TGAGAAGTGC 
    ATCATTGAGA AGGAGAACAA CTTCAAGCAA CCTGGAGAGA GATACCGATC CTGGGCACCA 
    GACAGGCAAG AACGATTTAT TTGCCGATGG GTTGATGCCT TATCTGACCC ACGCGTCACA 
    CATGAGATTC GCAGCATCTG GATCTCGTAC TGGTCTCAGG CTGATAAATC TTTGGGTCAG 
    AAGCTAGCAT CTCGTCTCAA CGTGAGACCA AGCATTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002301920.1
    CDS146..1624
    Translation

    Target ORF information:

    RefSeq Version XM_002301884.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa catalase isozyme 1 (LOC7496858), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002301884.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGATCCCT ACAAGTACCG TCCATCAAGC GCTTTCGGTA CTCCATACTG GACTACAAAT 
    TCTGGAGCTC CGGTTTGGAA CAACAACTCG TCTTTGACCG TTGGATCTAG AGGTCCAATC 
    CTCCTTGAGG ATTACCATCT GGTGGAGAAG CTTGCCAATT TTGACAGGGA GAGGATTCCA 
    GAGCGTGTTG TCCATGCTAG GGGAGCCAGT GCAAAGGGTT TCTTTGAGGT TACCCATGAT 
    ATCTCTGGCC TCACATGTGC TGATTTTCTC CGGGCTCCTG GAGTTCAGAC ACCTGTCATT 
    GTCCGCTTCT CCACAGTTAT CCATGAGCGT GGCAGCCCTG AAACCCTGAG GGATCCACGT 
    GGATTTGCAG TGAAGTTTTA CACCAGAGAG GGTAACTTTG ATCTCGTGGG AAACAATTTC 
    CCTGTCTTCT TCATCCGTGA TGGAATGAAA TTCCCAGACA TGGTGCATGC CCTTAAGCCC 
    AACCCTAAGT CTCATATTCA GGAGAACTGG AGGATTCTTG ACTTCTTCTC CCACCATCCT 
    GAAAGTTTGC ACATGTTCTC CTTCCTATTT GATGATTTGG GTGTTCCACA AGATTATAGA 
    CATATGGAAG GCTCTGGTGT TAACACCTAC ATGTTGATCA ACAAGGCTGG AAAAGCCCAT 
    TATGTGAAAT TTCATTGGAA ACCTACTTGT GGTGTGAAAT GTTTGTTGGA GGATGAGGCA 
    GTTAAAGTAG GAGGCACAAA TCACAGTCAT GCTACTCAGG ATCTATATGA CTCCATTGCA 
    GCTGGCACCT ATCCTGAGTG GAAACTTTTC ATCCAGACAA TTGATCCTGA CCATGAAGCC 
    AGGTTTGATT TTGACCCACT TGATGTAACC AAGACCTGGC CTGAGGATAT CTTGCCCCTG 
    CAGCCAGTTG GTCGCTTGGT CTTGAATAAG AACATCGACA ACTTCTTTGC TGAAAATGAG 
    CAGCTTGCTT TCTGCCCTGC TATTGTGGTT CCTGGTGTTT ACTATTCAGA TGACAAGCTA 
    CTCCAGACTC GAATCTTCTC CTATGCTGAT ACCCAGAGGC ACCGTCTTGG ACCAAACTAT 
    CTGCAGCTCC CTGCTAATGC TCCCAAGTGT GCTCATCATA ACAATCACCA TGAAGGTTTC 
    ATGAATTTCA TGCACAGGGA TGAGGAGGTC AACTATTTCC CATCAAGGTA TGATCCAGTT 
    CGCCATGCTG AGAGTTTCCC CATTCCTCCT GCTGTCTGCA GTGGAAAGCG TGAGAAGTGC 
    ATCATTGAGA AGGAGAACAA CTTCAAGCAA CCTGGAGAGA GATACCGATC CTGGGCACCA 
    GACAGGCAAG AACGATTTAT TTGCCGATGG GTTGATGCCT TATCTGACCC ACGCGTCACA 
    CATGAGATTC GCAGCATCTG GATCTCGTAC TGGTCTCAGG CTGATAAATC TTTGGGTCAG 
    AAGCTAGCAT CTCGTCTCAA CGTGAGACCA AGCATTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0002s01080g ( XM_002301884.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002301920.1 Populus trichocarpa catalase family protein (POPTR_0002s01080g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa06660
    Clone ID Related Accession (Same CDS sequence) XM_002301884.2 , XM_002301884.1
    Accession Version XM_002301884.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1479bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product catalase family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008468). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGATCCCT ACAAGTACCG TCCATCAAGC GCTTTCGGTA CTCCATACTG GACTACAAAT 
    TCTGGAGCTC CGGTTTGGAA CAACAACTCG TCTTTGACCG TTGGATCTAG AGGTCCAATC 
    CTCCTTGAGG ATTACCATCT GGTGGAGAAG CTTGCCAATT TTGACAGGGA GAGGATTCCA 
    GAGCGTGTTG TCCATGCTAG GGGAGCCAGT GCAAAGGGTT TCTTTGAGGT TACCCATGAT 
    ATCTCTGGCC TCACATGTGC TGATTTTCTC CGGGCTCCTG GAGTTCAGAC ACCTGTCATT 
    GTCCGCTTCT CCACAGTTAT CCATGAGCGT GGCAGCCCTG AAACCCTGAG GGATCCACGT 
    GGATTTGCAG TGAAGTTTTA CACCAGAGAG GGTAACTTTG ATCTCGTGGG AAACAATTTC 
    CCTGTCTTCT TCATCCGTGA TGGAATGAAA TTCCCAGACA TGGTGCATGC CCTTAAGCCC 
    AACCCTAAGT CTCATATTCA GGAGAACTGG AGGATTCTTG ACTTCTTCTC CCACCATCCT 
    GAAAGTTTGC ACATGTTCTC CTTCCTATTT GATGATTTGG GTGTTCCACA AGATTATAGA 
    CATATGGAAG GCTCTGGTGT TAACACCTAC ATGTTGATCA ACAAGGCTGG AAAAGCCCAT 
    TATGTGAAAT TTCATTGGAA ACCTACTTGT GGTGTGAAAT GTTTGTTGGA GGATGAGGCA 
    GTTAAAGTAG GAGGCACAAA TCACAGTCAT GCTACTCAGG ATCTATATGA CTCCATTGCA 
    GCTGGCACCT ATCCTGAGTG GAAACTTTTC ATCCAGACAA TTGATCCTGA CCATGAAGCC 
    AGGTTTGATT TTGACCCACT TGATGTAACC AAGACCTGGC CTGAGGATAT CTTGCCCCTG 
    CAGCCAGTTG GTCGCTTGGT CTTGAATAAG AACATCGACA ACTTCTTTGC TGAAAATGAG 
    CAGCTTGCTT TCTGCCCTGC TATTGTGGTT CCTGGTGTTT ACTATTCAGA TGACAAGCTA 
    CTCCAGACTC GAATCTTCTC CTATGCTGAT ACCCAGAGGC ACCGTCTTGG ACCAAACTAT 
    CTGCAGCTCC CTGCTAATGC TCCCAAGTGT GCTCATCATA ACAATCACCA TGAAGGTTTC 
    ATGAATTTCA TGCACAGGGA TGAGGAGGTC AACTATTTCC CATCAAGGTA TGATCCAGTT 
    CGCCATGCTG AGAGTTTCCC CATTCCTCCT GCTGTCTGCA GTGGAAAGCG TGAGAAGTGC 
    ATCATTGAGA AGGAGAACAA CTTCAAGCAA CCTGGAGAGA GATACCGATC CTGGGCACCA 
    GACAGGCAAG AACGATTTAT TTGCCGATGG GTTGATGCCT TATCTGACCC ACGCGTCACA 
    CATGAGATTC GCAGCATCTG GATCTCGTAC TGGTCTCAGG CTGATAAATC TTTGGGTCAG 
    AAGCTAGCAT CTCGTCTCAA CGTGAGACCA AGCATTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002301920.1
    CDS129..1607
    Translation

    Target ORF information:

    RefSeq Version XM_002301884.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa catalase family protein (POPTR_0002s01080g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002301884.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGATCCCT ACAAGTACCG TCCATCAAGC GCTTTCGGTA CTCCATACTG GACTACAAAT 
    TCTGGAGCTC CGGTTTGGAA CAACAACTCG TCTTTGACCG TTGGATCTAG AGGTCCAATC 
    CTCCTTGAGG ATTACCATCT GGTGGAGAAG CTTGCCAATT TTGACAGGGA GAGGATTCCA 
    GAGCGTGTTG TCCATGCTAG GGGAGCCAGT GCAAAGGGTT TCTTTGAGGT TACCCATGAT 
    ATCTCTGGCC TCACATGTGC TGATTTTCTC CGGGCTCCTG GAGTTCAGAC ACCTGTCATT 
    GTCCGCTTCT CCACAGTTAT CCATGAGCGT GGCAGCCCTG AAACCCTGAG GGATCCACGT 
    GGATTTGCAG TGAAGTTTTA CACCAGAGAG GGTAACTTTG ATCTCGTGGG AAACAATTTC 
    CCTGTCTTCT TCATCCGTGA TGGAATGAAA TTCCCAGACA TGGTGCATGC CCTTAAGCCC 
    AACCCTAAGT CTCATATTCA GGAGAACTGG AGGATTCTTG ACTTCTTCTC CCACCATCCT 
    GAAAGTTTGC ACATGTTCTC CTTCCTATTT GATGATTTGG GTGTTCCACA AGATTATAGA 
    CATATGGAAG GCTCTGGTGT TAACACCTAC ATGTTGATCA ACAAGGCTGG AAAAGCCCAT 
    TATGTGAAAT TTCATTGGAA ACCTACTTGT GGTGTGAAAT GTTTGTTGGA GGATGAGGCA 
    GTTAAAGTAG GAGGCACAAA TCACAGTCAT GCTACTCAGG ATCTATATGA CTCCATTGCA 
    GCTGGCACCT ATCCTGAGTG GAAACTTTTC ATCCAGACAA TTGATCCTGA CCATGAAGCC 
    AGGTTTGATT TTGACCCACT TGATGTAACC AAGACCTGGC CTGAGGATAT CTTGCCCCTG 
    CAGCCAGTTG GTCGCTTGGT CTTGAATAAG AACATCGACA ACTTCTTTGC TGAAAATGAG 
    CAGCTTGCTT TCTGCCCTGC TATTGTGGTT CCTGGTGTTT ACTATTCAGA TGACAAGCTA 
    CTCCAGACTC GAATCTTCTC CTATGCTGAT ACCCAGAGGC ACCGTCTTGG ACCAAACTAT 
    CTGCAGCTCC CTGCTAATGC TCCCAAGTGT GCTCATCATA ACAATCACCA TGAAGGTTTC 
    ATGAATTTCA TGCACAGGGA TGAGGAGGTC AACTATTTCC CATCAAGGTA TGATCCAGTT 
    CGCCATGCTG AGAGTTTCCC CATTCCTCCT GCTGTCTGCA GTGGAAAGCG TGAGAAGTGC 
    ATCATTGAGA AGGAGAACAA CTTCAAGCAA CCTGGAGAGA GATACCGATC CTGGGCACCA 
    GACAGGCAAG AACGATTTAT TTGCCGATGG GTTGATGCCT TATCTGACCC ACGCGTCACA 
    CATGAGATTC GCAGCATCTG GATCTCGTAC TGGTCTCAGG CTGATAAATC TTTGGGTCAG 
    AAGCTAGCAT CTCGTCTCAA CGTGAGACCA AGCATTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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