ORF » Species Summary » Populus trichocarpa » LOC7486361 cDNA ORF clone

LOC7486361 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7486361 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7486361 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa12586 XM_002307118.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0005s09190g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa429490 XM_002307118.3
Latest version!		 Populus trichocarpa superoxide dismutase [Fe] 3, chloroplastic (LOC7486361), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7486361 ( XM_002307118.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002307154.2 Populus trichocarpa hypothetical protein (POPTR_0005s09190g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa12586
    Clone ID Related Accession (Same CDS sequence) XM_002307118.2
    Accession Version XM_002307118.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 927bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008471). On Dec 16, 2013 this sequence version replaced XM_002307118.1. COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGAAATCTT TTACTCAAAA CCAGTTCAAT CCAACACTTC CATCACTGTA CCAAGTGAAA 
    AATTGTTCAA AAATAACAGG GCAAGAAAGA GTGGATTGCA CAACAAAGAT GGGTTGTTTT 
    AGTTATAATC TTTTCTCTTC TTCTCCATCT TGTCAAGTTC CAGTGACAGG CAGCTTTGCT 
    TGCCAATTCA AGACGACTCC TTACAAGCAA CTCCCTACTT TGTTTAAGCA GAAAAAGAAA 
    CATTTTAATG GGTGCCAAAG AGCTTCAAGA GTTGTCTCTT ACTATGCCTT GAAGACCCCT 
    CCTTATAAAC TTGATGCTTT AGAACCTTAT ATGAGTAAGA GGACAGTAGA GGTGCATTGG 
    AAAGAACATC ACGGTGCCTA TGTGGAAGGA TTGAATAAAG CATTAGCGAA AAGTGATATA 
    CTTTATGGCT ATACTCTGGA TGACCTTGTC AAGGTGACAT ATAACAATGG CAACCCTTCG 
    CCTGATTTCA ACAATGCTGC CCAGGTCTGG AATCATGATT TTTTTTGGGA ATCTATGCAA 
    CCAGGAGGAG GAGACATGCC AGAACTTGGC ATGCTTGAGC AGATTGAAAA GGATTTTGGT 
    TCCTTTACAA ATTTCAGAAA CAAGTTTGCA GAAACAGCTC TTACACTATT TGGCTCTGGC 
    TGGGTTTGGC TTGTCTTGAA GAGAGAAGAA CCACGTCTGG AAGTAGTTAA AACACTGAAT 
    GCAGTTACGC CAATTGTATG GGGTGACATT CCTATCATCA ACTTGGATAT GTGGGAGCAT 
    GCTTACTATC TTGACTACAA GAATGACAAA GAGAATTATG TCAATGCATT TATGGACCAC 
    CTTGTATCTT GGAACATGGC GATGGCACGC ATGGCCCGTG CAGAGGCATT CGTGAATCTA 
    GGTGAACCCA AAATTCCTAT TGCTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002307154.2
    CDS1..927
    Translation

    Target ORF information:

    RefSeq Version XM_002307118.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0005s09190g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002307118.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGAAATCTT TTACTCAAAA CCAGTTCAAT CCAACACTTC CATCACTGTA CCAAGTGAAA 
    AATTGTTCAA AAATAACAGG GCAAGAAAGA GTGGATTGCA CAACAAAGAT GGGTTGTTTT 
    AGTTATAATC TTTTCTCTTC TTCTCCATCT TGTCAAGTTC CAGTGACAGG CAGCTTTGCT 
    TGCCAATTCA AGACGACTCC TTACAAGCAA CTCCCTACTT TGTTTAAGCA GAAAAAGAAA 
    CATTTTAATG GGTGCCAAAG AGCTTCAAGA GTTGTCTCTT ACTATGCCTT GAAGACCCCT 
    CCTTATAAAC TTGATGCTTT AGAACCTTAT ATGAGTAAGA GGACAGTAGA GGTGCATTGG 
    AAAGAACATC ACGGTGCCTA TGTGGAAGGA TTGAATAAAG CATTAGCGAA AAGTGATATA 
    CTTTATGGCT ATACTCTGGA TGACCTTGTC AAGGTGACAT ATAACAATGG CAACCCTTCG 
    CCTGATTTCA ACAATGCTGC CCAGGTCTGG AATCATGATT TTTTTTGGGA ATCTATGCAA 
    CCAGGAGGAG GAGACATGCC AGAACTTGGC ATGCTTGAGC AGATTGAAAA GGATTTTGGT 
    TCCTTTACAA ATTTCAGAAA CAAGTTTGCA GAAACAGCTC TTACACTATT TGGCTCTGGC 
    TGGGTTTGGC TTGTCTTGAA GAGAGAAGAA CCACGTCTGG AAGTAGTTAA AACACTGAAT 
    GCAGTTACGC CAATTGTATG GGGTGACATT CCTATCATCA ACTTGGATAT GTGGGAGCAT 
    GCTTACTATC TTGACTACAA GAATGACAAA GAGAATTATG TCAATGCATT TATGGACCAC 
    CTTGTATCTT GGAACATGGC GATGGCACGC ATGGCCCGTG CAGAGGCATT CGTGAATCTA 
    GGTGAACCCA AAATTCCTAT TGCTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7486361 ( XM_002307118.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002307154.3 Populus trichocarpa superoxide dismutase [Fe] 3, chloroplastic (LOC7486361), mRNA.
    Price & Availability↑
    CloneID OPa429490
    Clone ID Related Accession (Same CDS sequence) XM_002307118.3
    Accession Version XM_002307118.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 819bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product superoxide dismutase [Fe] 3, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037289.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002307118.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGGGTTGTT TTAGTTATAA TCTTTTCTCT TCTTCTCCAT CTTGTCAAGT TCCAGTGACA 
    GGCAGCTTTG CTTGCCAATT CAAGACGACT CCTTACAAGC AACTCCCTAC TTTGTTTAAG 
    CAGAAAAAGA AACATTTTAA TGGGTGCCAA AGAGCTTCAA GAGTTGTCTC TTACTATGCC 
    TTGAAGACCC CTCCTTATAA ACTTGATGCT TTAGAACCTT ATATGAGTAA GAGGACAGTA 
    GAGGTGCATT GGAAAGAACA TCACGGTGCC TATGTGGAAG GATTGAATAA AGCATTAGCG 
    AAAAGTGATA TACTTTATGG ATATACTCTG GATGACCTTG TCAAGGTGAC ATATAACAAT 
    GGCAACCCTT CGCCTGATTT CAACCATGCT GCCCAGGTCT GGAATCATGA TTTTTTTTGG 
    GAATCTATGC AACCAGGAGG AGGAGACATG CCAGAACTTG GCATGCTTGA GCAGATTGAA 
    AAGGATTTTG GTTCCTTTAC AAATTTCAGA AACAAGTTTG CAGAAACAGC TCTTACACTA 
    TTTGGCTCTG GCTGGGTTTG GCTTGTCTTG AAGAGAGAAG AACCACGTCT GGAAGTAGTT 
    AAAACACTGA ATGCAGTTAC GCCAATTGTA TGGGGTGACA TTCCTATCAT CAACTTGGAT 
    ATGTGGGAGC ATGCTTACTA TCTTGACTAC AAGAATGACA AAGAGAATTA TGTCAATGCA 
    TTTATGGACC ACCTTGTATC TTGGAACATG GCGATGGCAC GCATGGCCCG TGCAGAGGCA 
    TTCGTGAATC TAGGTGAACC CAAAATTCCT ATTGCTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002307154.3
    CDS92..910
    Translation

    Target ORF information:

    RefSeq Version XM_002307118.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa superoxide dismutase [Fe] 3, chloroplastic (LOC7486361), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002307118.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGGGTTGTT TTAGTTATAA TCTTTTCTCT TCTTCTCCAT CTTGTCAAGT TCCAGTGACA 
    GGCAGCTTTG CTTGCCAATT CAAGACGACT CCTTACAAGC AACTCCCTAC TTTGTTTAAG 
    CAGAAAAAGA AACATTTTAA TGGGTGCCAA AGAGCTTCAA GAGTTGTCTC TTACTATGCC 
    TTGAAGACCC CTCCTTATAA ACTTGATGCT TTAGAACCTT ATATGAGTAA GAGGACAGTA 
    GAGGTGCATT GGAAAGAACA TCACGGTGCC TATGTGGAAG GATTGAATAA AGCATTAGCG 
    AAAAGTGATA TACTTTATGG ATATACTCTG GATGACCTTG TCAAGGTGAC ATATAACAAT 
    GGCAACCCTT CGCCTGATTT CAACCATGCT GCCCAGGTCT GGAATCATGA TTTTTTTTGG 
    GAATCTATGC AACCAGGAGG AGGAGACATG CCAGAACTTG GCATGCTTGA GCAGATTGAA 
    AAGGATTTTG GTTCCTTTAC AAATTTCAGA AACAAGTTTG CAGAAACAGC TCTTACACTA 
    TTTGGCTCTG GCTGGGTTTG GCTTGTCTTG AAGAGAGAAG AACCACGTCT GGAAGTAGTT 
    AAAACACTGA ATGCAGTTAC GCCAATTGTA TGGGGTGACA TTCCTATCAT CAACTTGGAT 
    ATGTGGGAGC ATGCTTACTA TCTTGACTAC AAGAATGACA AAGAGAATTA TGTCAATGCA 
    TTTATGGACC ACCTTGTATC TTGGAACATG GCGATGGCAC GCATGGCCCG TGCAGAGGCA 
    TTCGTGAATC TAGGTGAACC CAAAATTCCT ATTGCTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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