ORF » Species Summary » Populus trichocarpa » LOC7485584 cDNA ORF clone

LOC7485584 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7485584 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7485584 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa25463 XM_002316614.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0011s04390g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa440059 XM_002316614.3
Latest version!		 Populus trichocarpa probable ADP-ribosylation factor GTPase-activating protein AGD5 (LOC7485584), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa440060 XM_024581722.1
Latest version!		 Populus trichocarpa probable ADP-ribosylation factor GTPase-activating protein AGD5 (LOC7485584), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa440061 XM_024581723.1
Latest version!		 Populus trichocarpa probable ADP-ribosylation factor GTPase-activating protein AGD5 (LOC7485584), transcript variant X3, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7485584 ( XM_002316614.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002316650.2 Populus trichocarpa hypothetical protein (POPTR_0011s04390g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa25463
    Clone ID Related Accession (Same CDS sequence) XM_002316614.2
    Accession Version XM_002316614.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1431bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008477). On Dec 16, 2013 this sequence version replaced XM_002316614.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGAATGAGA AGGCTAATGT TTCGAAAGAA CTTAATGCAA AGCACAGAAA GATACTGGAA 
    AGCCTCCTTA AATTACCGGA GAATCGAGAG TGCGCTGACT GCAAAAGCAA AGGGCCTAGA 
    TGGGCTAGTG TGAATCTAGG AATCTTCATA TGCATGCAGT GTTCAGGTAT CCATAGGAGT 
    CTTGGAGTGC ACATCTCAAA GGTTAGATCA GCCACTTTAG ACACATGGCT TCCAGAGCAG 
    ATTGCATTTA TCCAATCTAC GGGGAACGAG AGATCAAATA ACTACTGGGA AGCAGAGTTG 
    CCTCCTAATT ATGACAGAGT TGGAATCGAG AATTTCATTC GAGCAAAATA TGAAGAGAAG 
    AGATGGGTTC CTAGGGATGG AAAAGCCAAA TCACCTTCGA GGGGGAGTGG AGAGGGGACC 
    TCAATTTATA GACCAGAACC AAGAAGTAGT GGGCATGGCC GAATGAATGG CACTAACCAT 
    GGTTCTGAGG AGAGAAGAAT TACTCGTCCA CCCATTACAA ATGACAGTAG TCCTGCTTCG 
    AGAAGTTCCA CTCCGGCGCC TATTAAAGCT TCCACACCAC TGCCTGTTAA AGCATCCACT 
    CCAATGCCTG TTAAAGCATC TCAACCGGTG GCACGTGATA CCAAACCACA AGAACCTGTG 
    CGGAAGTCGG AACCAGCAGC CCCAAAAGTT GAATTAGAAA AGAAGGAAGA AAGTGCAACC 
    AAAGTTGTAA CACCGCCAAA AGTTGATTAT GCAACTGAAC TTTTTAATTT GCTTTGCATG 
    GATGATTCTA GGGGGAGTAA TTCCACGACT CCTGCTCATG ATATTGGATG GACCGGTTTA 
    AAAGCTGCTG AAGCAAAATC AACACCCGAG AGAAGTGGTA CATCAAATTT TATTGAAAGC 
    ATGACACAAC CAAACTCAAC TTCACCTCCT TTAGAGAAAC CCCTAAAGGA TTCAAATAAT 
    GATCCTATGA ACCTCTTCAA CAAGTCCAGT ATGGTTTCTC CATTTTCCGT CCCTCAACAG 
    CAACTTGCAA TGTTATCCCA ACAACAACAA TTCCACATGA CTGCTGCAGC AAGGACTGGT 
    GGTGGATCCC AAACTGTTCC TGCCAATGCA CATAGACCCA TTTCCAATGG CATTCACTTA 
    CCTGCTCAGA ATTGGGGAAG CTATGGCTAT CAAGTTCCTG GGATGGTGAT GCCAAGCACT 
    TATCCACAGA CATATATTCA GATGGGAAGC GGCCAACAAA CCTATTCAGC AGGGAATTCA 
    TTTAATTTTC CAATATCAAG TATGTATAGG CCAGGGTCAG TAGCTCCTAT CAATGGCATG 
    ACAAACTCTA ATCCAAGTAT GCCTCCTCCA GCATTCCCTG TTGCCCCAAC TCAGCCCGCA 
    GGATATTTCG ATCTCTCATC ATTGGCACAA GGGATGTATA CAAAGCGGTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002316650.2
    CDS134..1564
    Translation

    Target ORF information:

    RefSeq Version XM_002316614.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0011s04390g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002316614.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGAATGAGA AGGCTAATGT TTCGAAAGAA CTTAATGCAA AGCACAGAAA GATACTGGAA 
    AGCCTCCTTA AATTACCGGA GAATCGAGAG TGCGCTGACT GCAAAAGCAA AGGGCCTAGA 
    TGGGCTAGTG TGAATCTAGG AATCTTCATA TGCATGCAGT GTTCAGGTAT CCATAGGAGT 
    CTTGGAGTGC ACATCTCAAA GGTTAGATCA GCCACTTTAG ACACATGGCT TCCAGAGCAG 
    ATTGCATTTA TCCAATCTAC GGGGAACGAG AGATCAAATA ACTACTGGGA AGCAGAGTTG 
    CCTCCTAATT ATGACAGAGT TGGAATCGAG AATTTCATTC GAGCAAAATA TGAAGAGAAG 
    AGATGGGTTC CTAGGGATGG AAAAGCCAAA TCACCTTCGA GGGGGAGTGG AGAGGGGACC 
    TCAATTTATA GACCAGAACC AAGAAGTAGT GGGCATGGCC GAATGAATGG CACTAACCAT 
    GGTTCTGAGG AGAGAAGAAT TACTCGTCCA CCCATTACAA ATGACAGTAG TCCTGCTTCG 
    AGAAGTTCCA CTCCGGCGCC TATTAAAGCT TCCACACCAC TGCCTGTTAA AGCATCCACT 
    CCAATGCCTG TTAAAGCATC TCAACCGGTG GCACGTGATA CCAAACCACA AGAACCTGTG 
    CGGAAGTCGG AACCAGCAGC CCCAAAAGTT GAATTAGAAA AGAAGGAAGA AAGTGCAACC 
    AAAGTTGTAA CACCGCCAAA AGTTGATTAT GCAACTGAAC TTTTTAATTT GCTTTGCATG 
    GATGATTCTA GGGGGAGTAA TTCCACGACT CCTGCTCATG ATATTGGATG GACCGGTTTA 
    AAAGCTGCTG AAGCAAAATC AACACCCGAG AGAAGTGGTA CATCAAATTT TATTGAAAGC 
    ATGACACAAC CAAACTCAAC TTCACCTCCT TTAGAGAAAC CCCTAAAGGA TTCAAATAAT 
    GATCCTATGA ACCTCTTCAA CAAGTCCAGT ATGGTTTCTC CATTTTCCGT CCCTCAACAG 
    CAACTTGCAA TGTTATCCCA ACAACAACAA TTCCACATGA CTGCTGCAGC AAGGACTGGT 
    GGTGGATCCC AAACTGTTCC TGCCAATGCA CATAGACCCA TTTCCAATGG CATTCACTTA 
    CCTGCTCAGA ATTGGGGAAG CTATGGCTAT CAAGTTCCTG GGATGGTGAT GCCAAGCACT 
    TATCCACAGA CATATATTCA GATGGGAAGC GGCCAACAAA CCTATTCAGC AGGGAATTCA 
    TTTAATTTTC CAATATCAAG TATGTATAGG CCAGGGTCAG TAGCTCCTAT CAATGGCATG 
    ACAAACTCTA ATCCAAGTAT GCCTCCTCCA GCATTCCCTG TTGCCCCAAC TCAGCCCGCA 
    GGATATTTCG ATCTCTCATC ATTGGCACAA GGGATGTATA CAAAGCGGTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7485584 ( XM_002316614.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002316650.2 Populus trichocarpa probable ADP-ribosylation factor GTPase-activating protein AGD5 (LOC7485584), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa440059
    Clone ID Related Accession (Same CDS sequence) XM_002316614.3
    Accession Version XM_002316614.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1431bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product probable ADP-ribosylation factor GTPase-activating protein AGD5 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037295.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002316614.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGAATGAGA AGGCTAATGT TTCGAAAGAA CTTAATGCAA AGCACAGAAA GATACTGGAA 
    AGCCTCCTTA AATTACCGGA GAATCGAGAG TGCGCTGACT GCAAAAGCAA AGGGCCTAGA 
    TGGGCTAGTG TGAATCTAGG AATCTTCATA TGCATGCAGT GTTCAGGTAT CCATAGGAGT 
    CTTGGAGTGC ACATCTCAAA GGTTAGATCA GCCACTTTAG ACACATGGCT TCCAGAGCAG 
    ATTGCATTTA TCCAATCTAC GGGGAACGAG AGATCAAATA ACTACTGGGA AGCAGAGTTG 
    CCTCCTAATT ATGACAGAGT TGGAATCGAG AATTTCATTC GAGCAAAATA TGAAGAGAAG 
    AGATGGGTTC CTAGGGATGG AAAAGCCAAA TCACCTTCGA GGGGGAGTGG AGAGGGGACC 
    TCAATTTATA GACCAGAACC AAGAAGTAGT GGGCATGGCC GAATGAATGG CACTAACCAT 
    GGTTCTGAGG AGAGAAGAAT TACTCGTCCA CCCATTACAA ATGACAGTAG TCCTGCTTCG 
    AGAAGTTCCA CTCCGGCGCC TATTAAAGCT TCCACACCAC TGCCTGTTAA AGCATCCACT 
    CCAATGCCTG TTAAAGCATC TCAACCGGTG GCACGTGATA CCAAACCACA AGAACCTGTG 
    CGGAAGTCGG AACCAGCAGC CCCAAAAGTT GAATTAGAAA AGAAGGAAGA AAGTGCAACC 
    AAAGTTGTAA CACCGCCAAA AGTTGATTAT GCAACTGAAC TTTTTAATTT GCTTTGCATG 
    GATGATTCTA GGGGGAGTAA TTCCACGACT CCTGCTCATG ATATTGGATG GACCGGTTTA 
    AAAGCTGCTG AAGCAAAATC AACACCCGAG AGAAGTGGTA CATCAAATTT TATTGAAAGC 
    ATGACACAAC CAAACTCAAC TTCACCTCCT TTAGAGAAAC CCCTAAAGGA TTCAAATAAT 
    GATCCTATGA ACCTCTTCAA CAAGTCCAGT ATGGTTTCTC CATTTTCCGT CCCTCAACAG 
    CAACTTGCAA TGTTATCCCA ACAACAACAA TTCCACATGA CTGCTGCAGC AAGGACTGGT 
    GGTGGATCCC AAACTGTTCC TGCCAATGCA CATAGACCCA TTTCCAATGG CATTCACTTA 
    CCTGCTCAGA ATTGGGGAAG CTATGGCTAT CAAGTTCCTG GGATGGTGAT GCCAAGCACT 
    TATCCACAGA CATATATTCA GATGGGAAGC GGCCAACAAA CCTATTCAGC AGGGAATTCA 
    TTTAATTTTC CAATATCAAG TATGTATAGG CCAGGGTCAG TAGCTCCTAT CAATGGCATG 
    ACAAACTCTA ATCCAAGTAT GCCTCCTCCA GCATTCCCTG TTGCTCCAAC TCAGCCCGCA 
    GGATATTTCG ATCTCTCATC ATTGGCACAA GGGATGTATA CAAAGCGGTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002316650.2
    CDS212..1642
    Translation

    Target ORF information:

    RefSeq Version XM_002316614.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa probable ADP-ribosylation factor GTPase-activating protein AGD5 (LOC7485584), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002316614.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGAATGAGA AGGCTAATGT TTCGAAAGAA CTTAATGCAA AGCACAGAAA GATACTGGAA 
    AGCCTCCTTA AATTACCGGA GAATCGAGAG TGCGCTGACT GCAAAAGCAA AGGGCCTAGA 
    TGGGCTAGTG TGAATCTAGG AATCTTCATA TGCATGCAGT GTTCAGGTAT CCATAGGAGT 
    CTTGGAGTGC ACATCTCAAA GGTTAGATCA GCCACTTTAG ACACATGGCT TCCAGAGCAG 
    ATTGCATTTA TCCAATCTAC GGGGAACGAG AGATCAAATA ACTACTGGGA AGCAGAGTTG 
    CCTCCTAATT ATGACAGAGT TGGAATCGAG AATTTCATTC GAGCAAAATA TGAAGAGAAG 
    AGATGGGTTC CTAGGGATGG AAAAGCCAAA TCACCTTCGA GGGGGAGTGG AGAGGGGACC 
    TCAATTTATA GACCAGAACC AAGAAGTAGT GGGCATGGCC GAATGAATGG CACTAACCAT 
    GGTTCTGAGG AGAGAAGAAT TACTCGTCCA CCCATTACAA ATGACAGTAG TCCTGCTTCG 
    AGAAGTTCCA CTCCGGCGCC TATTAAAGCT TCCACACCAC TGCCTGTTAA AGCATCCACT 
    CCAATGCCTG TTAAAGCATC TCAACCGGTG GCACGTGATA CCAAACCACA AGAACCTGTG 
    CGGAAGTCGG AACCAGCAGC CCCAAAAGTT GAATTAGAAA AGAAGGAAGA AAGTGCAACC 
    AAAGTTGTAA CACCGCCAAA AGTTGATTAT GCAACTGAAC TTTTTAATTT GCTTTGCATG 
    GATGATTCTA GGGGGAGTAA TTCCACGACT CCTGCTCATG ATATTGGATG GACCGGTTTA 
    AAAGCTGCTG AAGCAAAATC AACACCCGAG AGAAGTGGTA CATCAAATTT TATTGAAAGC 
    ATGACACAAC CAAACTCAAC TTCACCTCCT TTAGAGAAAC CCCTAAAGGA TTCAAATAAT 
    GATCCTATGA ACCTCTTCAA CAAGTCCAGT ATGGTTTCTC CATTTTCCGT CCCTCAACAG 
    CAACTTGCAA TGTTATCCCA ACAACAACAA TTCCACATGA CTGCTGCAGC AAGGACTGGT 
    GGTGGATCCC AAACTGTTCC TGCCAATGCA CATAGACCCA TTTCCAATGG CATTCACTTA 
    CCTGCTCAGA ATTGGGGAAG CTATGGCTAT CAAGTTCCTG GGATGGTGAT GCCAAGCACT 
    TATCCACAGA CATATATTCA GATGGGAAGC GGCCAACAAA CCTATTCAGC AGGGAATTCA 
    TTTAATTTTC CAATATCAAG TATGTATAGG CCAGGGTCAG TAGCTCCTAT CAATGGCATG 
    ACAAACTCTA ATCCAAGTAT GCCTCCTCCA GCATTCCCTG TTGCTCCAAC TCAGCCCGCA 
    GGATATTTCG ATCTCTCATC ATTGGCACAA GGGATGTATA CAAAGCGGTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7485584 ( XM_024581722.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024437490.1 Populus trichocarpa probable ADP-ribosylation factor GTPase-activating protein AGD5 (LOC7485584), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa440060
    Clone ID Related Accession (Same CDS sequence) XM_024581722.1
    Accession Version XM_024581722.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1431bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product probable ADP-ribosylation factor GTPase-activating protein AGD5 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037295.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGAGAAGGC TAATGTTTCG AAAGAACTTA ATGCAAAGCA CAGAAAGATA CTGGAAAGCC 
    TCCTTAAATT ACCGGAGAAT CGAGAGTGCG CTGACTGCAA AAGCAAGTAG AGGGCCTAGA 
    TGGGCTAGTG TGAATCTAGG AATCTTCATA TGCATGCAGT GTTCAGGTAT CCATAGGAGT 
    CTTGGAGTGC ACATCTCAAA GGTTAGATCA GCCACTTTAG ACACATGGCT TCCAGAGCAG 
    ATTGCATTTA TCCAATCTAC GGGGAACGAG AGATCAAATA ACTACTGGGA AGCAGAGTTG 
    CCTCCTAATT ATGACAGAGT TGGAATCGAG AATTTCATTC GAGCAAAATA TGAAGAGAAG 
    AGATGGGTTC CTAGGGATGG AAAAGCCAAA TCACCTTCGA GGGGGAGTGG AGAGGGGACC 
    TCAATTTATA GACCAGAACC AAGAAGTAGT GGGCATGGCC GAATGAATGG CACTAACCAT 
    GGTTCTGAGG AGAGAAGAAT TACTCGTCCA CCCATTACAA ATGACAGTAG TCCTGCTTCG 
    AGAAGTTCCA CTCCGGCGCC TATTAAAGCT TCCACACCAC TGCCTGTTAA AGCATCCACT 
    CCAATGCCTG TTAAAGCATC TCAACCGGTG GCACGTGATA CCAAACCACA AGAACCTGTG 
    CGGAAGTCGG AACCAGCAGC CCCAAAAGTT GAATTAGAAA AGAAGGAAGA AAGTGCAACC 
    AAAGTTGTAA CACCGCCAAA AGTTGATTAT GCAACTGAAC TTTTTAATTT GCTTTGCATG 
    GATGATTCTA GGGGGAGTAA TTCCACGACT CCTGCTCATG ATATTGGATG GACCGGTTTA 
    AAAGCTGCTG AAGCAAAATC AACACCCGAG AGAAGTGGTA CATCAAATTT TATTGAAAGC 
    ATGACACAAC CAAACTCAAC TTCACCTCCT TTAGAGAAAC CCCTAAAGGA TTCAAATAAT 
    GATCCTATGA ACCTCTTCAA CAAGTCCAGT ATGGTTTCTC CATTTTCCGT CCCTCAACAG 
    CAACTTGCAA TGTTATCCCA ACAACAACAA TTCCACATGA CTGCTGCAGC AAGGACTGGT 
    GGTGGATCCC AAACTGTTCC TGCCAATGCA CATAGACCCA TTTCCAATGG CATTCACTTA 
    CCTGCTCAGA ATTGGGGAAG CTATGGCTAT CAAGTTCCTG GGATGGTGAT GCCAAGCACT 
    TATCCACAGA CATATATTCA GATGGGAAGC GGCCAACAAA CCTATTCAGC AGGGAATTCA 
    TTTAATTTTC CAATATCAAG TATGTATAGG CCAGGGTCAG TAGCTCCTAT CAATGGCATG 
    ACAAACTCTA ATCCAAGTAT GCCTCCTCCA GCATTCCCTG TTGCTCCAAC TCAGCCCGCA 
    GGATATTTCG ATCTCTCATC ATTGGCACAA GGGATGTATA CAAAGCGGTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024437490.1
    CDS217..1647
    Translation

    Target ORF information:

    RefSeq Version XM_024581722.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa probable ADP-ribosylation factor GTPase-activating protein AGD5 (LOC7485584), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024581722.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGAGAAGGC TAATGTTTCG AAAGAACTTA ATGCAAAGCA CAGAAAGATA CTGGAAAGCC 
    TCCTTAAATT ACCGGAGAAT CGAGAGTGCG CTGACTGCAA AAGCAAGTAG AGGGCCTAGA 
    TGGGCTAGTG TGAATCTAGG AATCTTCATA TGCATGCAGT GTTCAGGTAT CCATAGGAGT 
    CTTGGAGTGC ACATCTCAAA GGTTAGATCA GCCACTTTAG ACACATGGCT TCCAGAGCAG 
    ATTGCATTTA TCCAATCTAC GGGGAACGAG AGATCAAATA ACTACTGGGA AGCAGAGTTG 
    CCTCCTAATT ATGACAGAGT TGGAATCGAG AATTTCATTC GAGCAAAATA TGAAGAGAAG 
    AGATGGGTTC CTAGGGATGG AAAAGCCAAA TCACCTTCGA GGGGGAGTGG AGAGGGGACC 
    TCAATTTATA GACCAGAACC AAGAAGTAGT GGGCATGGCC GAATGAATGG CACTAACCAT 
    GGTTCTGAGG AGAGAAGAAT TACTCGTCCA CCCATTACAA ATGACAGTAG TCCTGCTTCG 
    AGAAGTTCCA CTCCGGCGCC TATTAAAGCT TCCACACCAC TGCCTGTTAA AGCATCCACT 
    CCAATGCCTG TTAAAGCATC TCAACCGGTG GCACGTGATA CCAAACCACA AGAACCTGTG 
    CGGAAGTCGG AACCAGCAGC CCCAAAAGTT GAATTAGAAA AGAAGGAAGA AAGTGCAACC 
    AAAGTTGTAA CACCGCCAAA AGTTGATTAT GCAACTGAAC TTTTTAATTT GCTTTGCATG 
    GATGATTCTA GGGGGAGTAA TTCCACGACT CCTGCTCATG ATATTGGATG GACCGGTTTA 
    AAAGCTGCTG AAGCAAAATC AACACCCGAG AGAAGTGGTA CATCAAATTT TATTGAAAGC 
    ATGACACAAC CAAACTCAAC TTCACCTCCT TTAGAGAAAC CCCTAAAGGA TTCAAATAAT 
    GATCCTATGA ACCTCTTCAA CAAGTCCAGT ATGGTTTCTC CATTTTCCGT CCCTCAACAG 
    CAACTTGCAA TGTTATCCCA ACAACAACAA TTCCACATGA CTGCTGCAGC AAGGACTGGT 
    GGTGGATCCC AAACTGTTCC TGCCAATGCA CATAGACCCA TTTCCAATGG CATTCACTTA 
    CCTGCTCAGA ATTGGGGAAG CTATGGCTAT CAAGTTCCTG GGATGGTGAT GCCAAGCACT 
    TATCCACAGA CATATATTCA GATGGGAAGC GGCCAACAAA CCTATTCAGC AGGGAATTCA 
    TTTAATTTTC CAATATCAAG TATGTATAGG CCAGGGTCAG TAGCTCCTAT CAATGGCATG 
    ACAAACTCTA ATCCAAGTAT GCCTCCTCCA GCATTCCCTG TTGCTCCAAC TCAGCCCGCA 
    GGATATTTCG ATCTCTCATC ATTGGCACAA GGGATGTATA CAAAGCGGTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7485584 ( XM_024581723.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024437491.1 Populus trichocarpa probable ADP-ribosylation factor GTPase-activating protein AGD5 (LOC7485584), transcript variant X3, mRNA.
    Price & Availability↑
    CloneID OPa440061
    Clone ID Related Accession (Same CDS sequence) XM_024581723.1
    Accession Version XM_024581723.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1383bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product probable ADP-ribosylation factor GTPase-activating protein AGD5 isoform X3
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037295.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGAATGAGA AGGCTAATGT TTCGAAAGAA CTTAATGCAA AGCACAGAAA GATACTGGAA 
    AGCCTCCTTA AATTACCGGA GAATCGAGAG TGCGCTGACT GCAAAAGCAA AGGGCCTAGA 
    TGGGCTAGTG TGAATCTAGG AATCTTCATA TGCATGCAGT GTTCAGGTAT CCATAGGAGT 
    CTTGGAGTGC ACATCTCAAA GGTTAGATCA GCCACTTTAG ACACATGGCT TCCAGAGCAG 
    ATTGCATTTA TCCAATCTAC GGGGAACGAG AGATCAAATA ACTACTGGGA AGCAGAGTTG 
    CCTCCTAATT ATGACAGAGT TGGAATCGAG AATTTCATTC GAGCAAAATA TGAAGAGAAG 
    AGATGGGTTC CTAGGGATGG AAAAGCCAAA TCACCTTCGA GGGGGAGTGG AGAGGGGACC 
    TCAATTTATA GACCAGAACC AAGAAGTAGT GGGCATGGCC GAATGAATGG CACTAACCAT 
    GGTTCTGAGG AGAGAAGAAT TACTCGTCCA CCCATTACAA ATGACAGTAG TCCTGCTTCG 
    AGAAGTTCCA CTCCAATGCC TGTTAAAGCA TCTCAACCGG TGGCACGTGA TACCAAACCA 
    CAAGAACCTG TGCGGAAGTC GGAACCAGCA GCCCCAAAAG TTGAATTAGA AAAGAAGGAA 
    GAAAGTGCAA CCAAAGTTGT AACACCGCCA AAAGTTGATT ATGCAACTGA ACTTTTTAAT 
    TTGCTTTGCA TGGATGATTC TAGGGGGAGT AATTCCACGA CTCCTGCTCA TGATATTGGA 
    TGGACCGGTT TAAAAGCTGC TGAAGCAAAA TCAACACCCG AGAGAAGTGG TACATCAAAT 
    TTTATTGAAA GCATGACACA ACCAAACTCA ACTTCACCTC CTTTAGAGAA ACCCCTAAAG 
    GATTCAAATA ATGATCCTAT GAACCTCTTC AACAAGTCCA GTATGGTTTC TCCATTTTCC 
    GTCCCTCAAC AGCAACTTGC AATGTTATCC CAACAACAAC AATTCCACAT GACTGCTGCA 
    GCAAGGACTG GTGGTGGATC CCAAACTGTT CCTGCCAATG CACATAGACC CATTTCCAAT 
    GGCATTCACT TACCTGCTCA GAATTGGGGA AGCTATGGCT ATCAAGTTCC TGGGATGGTG 
    ATGCCAAGCA CTTATCCACA GACATATATT CAGATGGGAA GCGGCCAACA AACCTATTCA 
    GCAGGGAATT CATTTAATTT TCCAATATCA AGTATGTATA GGCCAGGGTC AGTAGCTCCT 
    ATCAATGGCA TGACAAACTC TAATCCAAGT ATGCCTCCTC CAGCATTCCC TGTTGCTCCA 
    ACTCAGCCCG CAGGATATTT CGATCTCTCA TCATTGGCAC AAGGGATGTA TACAAAGCGG 
    TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024437491.1
    CDS213..1595
    Translation

    Target ORF information:

    RefSeq Version XM_024581723.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa probable ADP-ribosylation factor GTPase-activating protein AGD5 (LOC7485584), transcript variant X3, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024581723.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGAATGAGA AGGCTAATGT TTCGAAAGAA CTTAATGCAA AGCACAGAAA GATACTGGAA 
    AGCCTCCTTA AATTACCGGA GAATCGAGAG TGCGCTGACT GCAAAAGCAA AGGGCCTAGA 
    TGGGCTAGTG TGAATCTAGG AATCTTCATA TGCATGCAGT GTTCAGGTAT CCATAGGAGT 
    CTTGGAGTGC ACATCTCAAA GGTTAGATCA GCCACTTTAG ACACATGGCT TCCAGAGCAG 
    ATTGCATTTA TCCAATCTAC GGGGAACGAG AGATCAAATA ACTACTGGGA AGCAGAGTTG 
    CCTCCTAATT ATGACAGAGT TGGAATCGAG AATTTCATTC GAGCAAAATA TGAAGAGAAG 
    AGATGGGTTC CTAGGGATGG AAAAGCCAAA TCACCTTCGA GGGGGAGTGG AGAGGGGACC 
    TCAATTTATA GACCAGAACC AAGAAGTAGT GGGCATGGCC GAATGAATGG CACTAACCAT 
    GGTTCTGAGG AGAGAAGAAT TACTCGTCCA CCCATTACAA ATGACAGTAG TCCTGCTTCG 
    AGAAGTTCCA CTCCAATGCC TGTTAAAGCA TCTCAACCGG TGGCACGTGA TACCAAACCA 
    CAAGAACCTG TGCGGAAGTC GGAACCAGCA GCCCCAAAAG TTGAATTAGA AAAGAAGGAA 
    GAAAGTGCAA CCAAAGTTGT AACACCGCCA AAAGTTGATT ATGCAACTGA ACTTTTTAAT 
    TTGCTTTGCA TGGATGATTC TAGGGGGAGT AATTCCACGA CTCCTGCTCA TGATATTGGA 
    TGGACCGGTT TAAAAGCTGC TGAAGCAAAA TCAACACCCG AGAGAAGTGG TACATCAAAT 
    TTTATTGAAA GCATGACACA ACCAAACTCA ACTTCACCTC CTTTAGAGAA ACCCCTAAAG 
    GATTCAAATA ATGATCCTAT GAACCTCTTC AACAAGTCCA GTATGGTTTC TCCATTTTCC 
    GTCCCTCAAC AGCAACTTGC AATGTTATCC CAACAACAAC AATTCCACAT GACTGCTGCA 
    GCAAGGACTG GTGGTGGATC CCAAACTGTT CCTGCCAATG CACATAGACC CATTTCCAAT 
    GGCATTCACT TACCTGCTCA GAATTGGGGA AGCTATGGCT ATCAAGTTCC TGGGATGGTG 
    ATGCCAAGCA CTTATCCACA GACATATATT CAGATGGGAA GCGGCCAACA AACCTATTCA 
    GCAGGGAATT CATTTAATTT TCCAATATCA AGTATGTATA GGCCAGGGTC AGTAGCTCCT 
    ATCAATGGCA TGACAAACTC TAATCCAAGT ATGCCTCCTC CAGCATTCCC TGTTGCTCCA 
    ACTCAGCCCG CAGGATATTT CGATCTCTCA TCATTGGCAC AAGGGATGTA TACAAAGCGG 
    TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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