ORF » Species Summary » Populus trichocarpa » LOC7484029 cDNA ORF clone

LOC7484029 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7484029 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7484029 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa33305 XM_002322697.2
Latest version!		 Populus trichocarpa ubiquitin-protein ligase (POPTR_0016s05980g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa445461 XM_024587637.1
Latest version!		 Populus trichocarpa E3 ubiquitin-protein ligase UPL5 (LOC7484029), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00
OPa445462 XM_024587638.1
Latest version!		 Populus trichocarpa E3 ubiquitin-protein ligase UPL5 (LOC7484029), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7484029 ( XM_002322697.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002322733.2 Populus trichocarpa ubiquitin-protein ligase (POPTR_0016s05980g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa33305
    Clone ID Related Accession (Same CDS sequence) XM_002322697.2
    Accession Version XM_002322697.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1779bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product ubiquitin-protein ligase
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008482). On Dec 16, 2013 this sequence version replaced XM_002322697.1. COMPLETENESS: incomplete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGCGTAAAG ACGACACCGA GTCATCCACC GGCAACAATC AAGAACAACA ACAACCTCCC 
    TCCATCTCCT CCACCAATCA GCTCTCCACA CGTGTCTCCG ACGCCTCCAC CTCTTCATCA 
    TCCACCAACT TCCCCTCCTC CGCCATGCGG ACCACCACAC CCTCGCCGCT GCGGCTGTCG 
    CAATCAAGAC TCCAATTCTT TATCAGAATC ATCTCCGAAG CAACTCATGT TGTGATCAAC 
    GCGAACTCGA GCGATTCTGT TAAATCACTC CACGAACGGA TTCGCGTGAT GACCGGAATT 
    CCGGTGATAG AGCAGAGATT AATCTACTTA GGTAAGCAAT TGCAATACGA GAACAAACTC 
    TCCGATTACT CTATTGAGAA CGATTCGATC CTTCATTTAG TCGGTCGAAT GCGTAGCACT 
    AGGCATCCTC GTACTTGTCA ATTGATTAAT GATATGGTTT CTTACATTTG TCGGATATGT 
    AAGTCTATAT TGCCGTGTGG TGCTCATCCT TACACGTCAA AGCATATAAA GGAGTTGATG 
    AATGAGTTCT TTAGTTTGAC GCCCAAGGAT AATAACGAGG ATGCTTCTGG GCACTTGGAT 
    GTTTTTTTGT CCAATAGTGC ACCGGCTGTG CTAGTTGCAC TTTATGTTTC GAGTATTAAA 
    GGGAATAAGG AGTGTGCGGA GGGTGCTATT AGGCACTTTT TGAATTCGTG TAGGATTTCG 
    TTGCCTAAGA ATTTGCATTT ACAGTGTGTG CCGATTGTGA TGGAGTTTTG TAATTTGTTG 
    AGGAAGGTTG GGAGTGACGA TCCATTGTAT GTTGTTTGTA GGAGTTGTCT TGGTTCGTTG 
    TTGGAGAATG GTAGGGGTAC GTGTGGGTGG AGGTATCATG GAGAGGAGGA GGGGAAGGGA 
    GCTGTTGTGC AGGAGATTTT TCCATTTGTT AGTGAGTTGG GGAGCAAGTT GTTTAAAGAT 
    TTGATGGGGA GTGTGGTGGA GAGTATGGGG CCATCGGAGG CTGATGTTAA GGATTTTTCG 
    GCGTTTTTGA TACCATTGCA TAGTGTGATC TCCGAGCAAA GGGGATTTAG GAGTCCAATT 
    TCGATGCCTC TGAACAAGTT GGCGTTTCAT TGTCCATTGT ATGCGAAAGA AATTGAGCAG 
    CTTCATGTGA TATTCATTGA TTTGCTGAAT ATTATGGAGA AATGTCTTGG GAAAATGCAG 
    GATTCATCGA ATTTGAAAAC GAATGGAGAA AGTGAGTTGA ATCATACAGG TTGGTCCCAA 
    TATTTGTTTA TTTTGAAGGA GTTGAATAAC ATTGCTAAAC TTTATAAGGG TGCTGAGGAA 
    AAGTTTTGGA CGGTTTTGAG GCTTAGAAAA GCTTCCTTGT GTGCGCTGAT TGTTAGATAT 
    GCTAAACAAA CTGATGATCA TCAGTGGCTT CTTCAGCATA AGGATGTGAC TGATTTTGAG 
    TCTAGGAGGC ATTTGGCTAT GATGATGTTC CCTGAGGTGA AAGAAGATTA CGAGGAGCTG 
    CACGAGATGC TCATTGATCG GTCGCAATTG TTGGCGGAGT CATTTGAGTA CATAATGCAT 
    GCCGAATCAG ATACACTGCA TGGTGGTTTA TTTATGGAAT TTAAAAATGA GGAAGCAACT 
    GGTCCTGGTG TATTGCGTGA GTGGTTTTTC TTGGTTACAC AAGCTATATT TGATCCTCAA 
    AATGCCCTTT TTGTGGCATG CCCAAGTGAT CGTAGAAGGT TCTATCCTAA TTCCGGCTTT 
    CCTATACGTT TTATCTTTTC TTTATTGAAT GTAGCTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002322733.2
    CDS318..2096
    Translation

    Target ORF information:

    RefSeq Version XM_002322697.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa ubiquitin-protein ligase (POPTR_0016s05980g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002322697.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGCGTAAAG ACGACACCGA GTCATCCACC GGCAACAATC AAGAACAACA ACAACCTCCC 
    TCCATCTCCT CCACCAATCA GCTCTCCACA CGTGTCTCCG ACGCCTCCAC CTCTTCATCA 
    TCCACCAACT TCCCCTCCTC CGCCATGCGG ACCACCACAC CCTCGCCGCT GCGGCTGTCG 
    CAATCAAGAC TCCAATTCTT TATCAGAATC ATCTCCGAAG CAACTCATGT TGTGATCAAC 
    GCGAACTCGA GCGATTCTGT TAAATCACTC CACGAACGGA TTCGCGTGAT GACCGGAATT 
    CCGGTGATAG AGCAGAGATT AATCTACTTA GGTAAGCAAT TGCAATACGA GAACAAACTC 
    TCCGATTACT CTATTGAGAA CGATTCGATC CTTCATTTAG TCGGTCGAAT GCGTAGCACT 
    AGGCATCCTC GTACTTGTCA ATTGATTAAT GATATGGTTT CTTACATTTG TCGGATATGT 
    AAGTCTATAT TGCCGTGTGG TGCTCATCCT TACACGTCAA AGCATATAAA GGAGTTGATG 
    AATGAGTTCT TTAGTTTGAC GCCCAAGGAT AATAACGAGG ATGCTTCTGG GCACTTGGAT 
    GTTTTTTTGT CCAATAGTGC ACCGGCTGTG CTAGTTGCAC TTTATGTTTC GAGTATTAAA 
    GGGAATAAGG AGTGTGCGGA GGGTGCTATT AGGCACTTTT TGAATTCGTG TAGGATTTCG 
    TTGCCTAAGA ATTTGCATTT ACAGTGTGTG CCGATTGTGA TGGAGTTTTG TAATTTGTTG 
    AGGAAGGTTG GGAGTGACGA TCCATTGTAT GTTGTTTGTA GGAGTTGTCT TGGTTCGTTG 
    TTGGAGAATG GTAGGGGTAC GTGTGGGTGG AGGTATCATG GAGAGGAGGA GGGGAAGGGA 
    GCTGTTGTGC AGGAGATTTT TCCATTTGTT AGTGAGTTGG GGAGCAAGTT GTTTAAAGAT 
    TTGATGGGGA GTGTGGTGGA GAGTATGGGG CCATCGGAGG CTGATGTTAA GGATTTTTCG 
    GCGTTTTTGA TACCATTGCA TAGTGTGATC TCCGAGCAAA GGGGATTTAG GAGTCCAATT 
    TCGATGCCTC TGAACAAGTT GGCGTTTCAT TGTCCATTGT ATGCGAAAGA AATTGAGCAG 
    CTTCATGTGA TATTCATTGA TTTGCTGAAT ATTATGGAGA AATGTCTTGG GAAAATGCAG 
    GATTCATCGA ATTTGAAAAC GAATGGAGAA AGTGAGTTGA ATCATACAGG TTGGTCCCAA 
    TATTTGTTTA TTTTGAAGGA GTTGAATAAC ATTGCTAAAC TTTATAAGGG TGCTGAGGAA 
    AAGTTTTGGA CGGTTTTGAG GCTTAGAAAA GCTTCCTTGT GTGCGCTGAT TGTTAGATAT 
    GCTAAACAAA CTGATGATCA TCAGTGGCTT CTTCAGCATA AGGATGTGAC TGATTTTGAG 
    TCTAGGAGGC ATTTGGCTAT GATGATGTTC CCTGAGGTGA AAGAAGATTA CGAGGAGCTG 
    CACGAGATGC TCATTGATCG GTCGCAATTG TTGGCGGAGT CATTTGAGTA CATAATGCAT 
    GCCGAATCAG ATACACTGCA TGGTGGTTTA TTTATGGAAT TTAAAAATGA GGAAGCAACT 
    GGTCCTGGTG TATTGCGTGA GTGGTTTTTC TTGGTTACAC AAGCTATATT TGATCCTCAA 
    AATGCCCTTT TTGTGGCATG CCCAAGTGAT CGTAGAAGGT TCTATCCTAA TTCCGGCTTT 
    CCTATACGTT TTATCTTTTC TTTATTGAAT GTAGCTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7484029 ( XM_024587637.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024443405.1 Populus trichocarpa E3 ubiquitin-protein ligase UPL5 (LOC7484029), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa445461
    Clone ID Related Accession (Same CDS sequence) XM_024587637.1
    Accession Version XM_024587637.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2349bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product E3 ubiquitin-protein ligase UPL5 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037300.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    ATGCGTAAAG ACGACACCGA GTCATCCACC GGCAACAATC AAGAACAACA ACAACCTCCC 
    TCCATCTCCT CCACCAATCA GCTCTCCACA CGTGTCTCCG ACGCCTCCAC CTCTTCATCA 
    TCCACCAACT TCCCCTCCTC CGCCATGCGG ACCACCACAC CCTCGCCGCT GCGGCTGTCG 
    CAATCAAGAC TCCAATTCTT TATCAGAATC ATCTCCGAAG CAACTCATGT TGTGATCAAC 
    GCGAACTCGA GCGATTCTGT TAAATCACTC CACGAACGGA TTCGCGTGAT GACCGGAATT 
    CCGGTGATAG AGCAGAGATT AATCTACTTA GGTAAGCAAT TGCAATACGA GAACAAACTC 
    TCCGATTACT CTATTGAGAA CGATTCGATC CTTCATTTAG TCGGTCGAAT GCGTAGCACT 
    AGGCATCCTC GTACTTGTCA ATTGATTAAT GATATGGTTT CTTACATTTG TCGGATATGT 
    AAGTCTATAT TGCCGTGTGG TGCTCATCCT TACACGTCAA AGCATATAAA GGAGTTGATG 
    AATGAGTTCT TTAGTTTGAC GCCCAAGGAT AATAACGAGG ATGCTTCTGG GCACTTGGAT 
    GTTTTTTTGT CCAATAGTGC ACCGGCTGTG CTAGTTGCAC TTTATGTTTC GAGTATTAAA 
    GGGAATAAGG AGTGTGCGGA GGGTGCTATT AGGCACTTTT TGAATTCGTG TAGGATTTCG 
    TTGCCTAAGA ATTTGCATTT ACAGTGTGTG CCGATTGTGA TGGAGTTTTG TAATTTGTTG 
    AGGAAGGTTG GGAGTGACGA TCCATTGTAT GTTGTTTGTA GGAGTTGTCT TGGTTCGTTG 
    TTGGAGAATG GTAGGGGTAC GTGTGGGTGG AGGTATCATG GAGAGGAGGA GGGGAAGGGA 
    GCTGTTGTGC AGGAGATTTT TCCATTTGTT AGTGAGTTGG GGAGCAAGTT GTTTAAAGAT 
    TTGATGGGGA GTGTGGTGGA GAGTATGGGG CCATCGGAGG CTGATGTTAA GGATTTTTCG 
    GCGTTTTTGA TACCATTGCA TAGTGTGATC TCCGAGCAAA GGGGATTTAG GAGTCCAATT 
    TCGATGCCTC TGAACAAGTT GGCGTTTCAT TGTCCATTGT ATGCGAAAGA AATTGAGCAG 
    CTTCATGTGA TATTCATTGA TTTGCTGAAT ATTATGGAGA AATGTCTTGG GAAAATGCAG 
    GATTCATCGA ATTTGAAAAC GAATGGAGAA AGTGAGTTGA ATCATACAGG TTGGTCCCAA 
    TATTTGTTTA TTTTGAAGGA GTTGAATAAC ATTGCTAAAC TTTATAAGGG TGCTGAGGAA 
    AAGTTTTGGA CGGTTTTGAG GCTTAGAAAA GCTTCCTTGT GTGCGCTGAT TGTTAGATAT 
    GCTAAACAAA CTGATGATCA TCAGTGGCTT CTTCAGCATA AGGATGTGAC TGATTTTGAG 
    TCTAGGAGGC ATTTGGCTAT GATGATGTTC CCTGAGGTGA AAGAAGATTA CGAGGAGCTG 
    CACGAGATGC TCATTGATCG GTCGCAATTG TTGGCGGAGT CATTTGAGTA CATAATGCAT 
    GCCGAATCAG ATACACTGCA TGGTGGTTTA TTTATGGAAT TTAAAAATGA GGAAGCAACT 
    GGTCCTGGTG TATTGCGTGA GTGGTTTTTC TTGGTTACAC AAGCTATATT TGATCCTCAA 
    AATGCCCTTT TTGTGGCATG CCCAAGTGAT CGTAGAAGGT TCTATCCTAA TTCCGCATCT 
    AAGGTGGATC CCATGCACCT TGATTATTTC ACATTCTCTG GGCGAGTGAT TGCGTTAGCT 
    TTGATGCATA AAGTGCAAGT TGGCATTGTA TTTGATCGTG TGTTTTTCTT GCAATTGGCT 
    GGGATGCATA TTTCTTTGGA AGACATACGG GATGCAGATC CATGCTTGTA TAACAGCTGC 
    AAACAGATTC TTCAGAGGGA TCCTGAGTTC ATTGATTCAA ATGCTTTGGG GCTGACATTT 
    GTCAGAGAAG TTGAGGAGCT AGGATCCATA AAAGTTGTGG AACTTTGCCC TGGTGGGAAA 
    GGCATTGTTG TAAATAGCAA GAACCGGGAG AAATATGTCA ATCTGCTCAT TCAACATCGC 
    TTTGTCACAT CTATTTCTGA CCCTGTATCT CGATTTGCAC GTGGTTTTGC TGATATTCTT 
    TCAAACCCTG GGGAACAGAA GCTCTTCTTC CGAAGCTTGG AGCTCGAAGA TCTTGATTGG 
    ATGCTATATG GAAGTGAAAG TGCTATATGT GTGGAAGACT GGAAGGCTCA CACTGAGTAC 
    AGCAGCTTAA TTGAAACTGA TCCTCAGATA TCCTGGTTCT GGAAGGTGTG CTGCTGTTTT 
    GCTAATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024443405.1
    CDS354..2702
    Translation

    Target ORF information:

    RefSeq Version XM_024587637.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa E3 ubiquitin-protein ligase UPL5 (LOC7484029), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024587637.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    ATGCGTAAAG ACGACACCGA GTCATCCACC GGCAACAATC AAGAACAACA ACAACCTCCC 
    TCCATCTCCT CCACCAATCA GCTCTCCACA CGTGTCTCCG ACGCCTCCAC CTCTTCATCA 
    TCCACCAACT TCCCCTCCTC CGCCATGCGG ACCACCACAC CCTCGCCGCT GCGGCTGTCG 
    CAATCAAGAC TCCAATTCTT TATCAGAATC ATCTCCGAAG CAACTCATGT TGTGATCAAC 
    GCGAACTCGA GCGATTCTGT TAAATCACTC CACGAACGGA TTCGCGTGAT GACCGGAATT 
    CCGGTGATAG AGCAGAGATT AATCTACTTA GGTAAGCAAT TGCAATACGA GAACAAACTC 
    TCCGATTACT CTATTGAGAA CGATTCGATC CTTCATTTAG TCGGTCGAAT GCGTAGCACT 
    AGGCATCCTC GTACTTGTCA ATTGATTAAT GATATGGTTT CTTACATTTG TCGGATATGT 
    AAGTCTATAT TGCCGTGTGG TGCTCATCCT TACACGTCAA AGCATATAAA GGAGTTGATG 
    AATGAGTTCT TTAGTTTGAC GCCCAAGGAT AATAACGAGG ATGCTTCTGG GCACTTGGAT 
    GTTTTTTTGT CCAATAGTGC ACCGGCTGTG CTAGTTGCAC TTTATGTTTC GAGTATTAAA 
    GGGAATAAGG AGTGTGCGGA GGGTGCTATT AGGCACTTTT TGAATTCGTG TAGGATTTCG 
    TTGCCTAAGA ATTTGCATTT ACAGTGTGTG CCGATTGTGA TGGAGTTTTG TAATTTGTTG 
    AGGAAGGTTG GGAGTGACGA TCCATTGTAT GTTGTTTGTA GGAGTTGTCT TGGTTCGTTG 
    TTGGAGAATG GTAGGGGTAC GTGTGGGTGG AGGTATCATG GAGAGGAGGA GGGGAAGGGA 
    GCTGTTGTGC AGGAGATTTT TCCATTTGTT AGTGAGTTGG GGAGCAAGTT GTTTAAAGAT 
    TTGATGGGGA GTGTGGTGGA GAGTATGGGG CCATCGGAGG CTGATGTTAA GGATTTTTCG 
    GCGTTTTTGA TACCATTGCA TAGTGTGATC TCCGAGCAAA GGGGATTTAG GAGTCCAATT 
    TCGATGCCTC TGAACAAGTT GGCGTTTCAT TGTCCATTGT ATGCGAAAGA AATTGAGCAG 
    CTTCATGTGA TATTCATTGA TTTGCTGAAT ATTATGGAGA AATGTCTTGG GAAAATGCAG 
    GATTCATCGA ATTTGAAAAC GAATGGAGAA AGTGAGTTGA ATCATACAGG TTGGTCCCAA 
    TATTTGTTTA TTTTGAAGGA GTTGAATAAC ATTGCTAAAC TTTATAAGGG TGCTGAGGAA 
    AAGTTTTGGA CGGTTTTGAG GCTTAGAAAA GCTTCCTTGT GTGCGCTGAT TGTTAGATAT 
    GCTAAACAAA CTGATGATCA TCAGTGGCTT CTTCAGCATA AGGATGTGAC TGATTTTGAG 
    TCTAGGAGGC ATTTGGCTAT GATGATGTTC CCTGAGGTGA AAGAAGATTA CGAGGAGCTG 
    CACGAGATGC TCATTGATCG GTCGCAATTG TTGGCGGAGT CATTTGAGTA CATAATGCAT 
    GCCGAATCAG ATACACTGCA TGGTGGTTTA TTTATGGAAT TTAAAAATGA GGAAGCAACT 
    GGTCCTGGTG TATTGCGTGA GTGGTTTTTC TTGGTTACAC AAGCTATATT TGATCCTCAA 
    AATGCCCTTT TTGTGGCATG CCCAAGTGAT CGTAGAAGGT TCTATCCTAA TTCCGCATCT 
    AAGGTGGATC CCATGCACCT TGATTATTTC ACATTCTCTG GGCGAGTGAT TGCGTTAGCT 
    TTGATGCATA AAGTGCAAGT TGGCATTGTA TTTGATCGTG TGTTTTTCTT GCAATTGGCT 
    GGGATGCATA TTTCTTTGGA AGACATACGG GATGCAGATC CATGCTTGTA TAACAGCTGC 
    AAACAGATTC TTCAGAGGGA TCCTGAGTTC ATTGATTCAA ATGCTTTGGG GCTGACATTT 
    GTCAGAGAAG TTGAGGAGCT AGGATCCATA AAAGTTGTGG AACTTTGCCC TGGTGGGAAA 
    GGCATTGTTG TAAATAGCAA GAACCGGGAG AAATATGTCA ATCTGCTCAT TCAACATCGC 
    TTTGTCACAT CTATTTCTGA CCCTGTATCT CGATTTGCAC GTGGTTTTGC TGATATTCTT 
    TCAAACCCTG GGGAACAGAA GCTCTTCTTC CGAAGCTTGG AGCTCGAAGA TCTTGATTGG 
    ATGCTATATG GAAGTGAAAG TGCTATATGT GTGGAAGACT GGAAGGCTCA CACTGAGTAC 
    AGCAGCTTAA TTGAAACTGA TCCTCAGATA TCCTGGTTCT GGAAGGTGTG CTGCTGTTTT 
    GCTAATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7484029 ( XM_024587638.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024443406.1 Populus trichocarpa E3 ubiquitin-protein ligase UPL5 (LOC7484029), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa445462
    Clone ID Related Accession (Same CDS sequence) XM_024587638.1
    Accession Version XM_024587638.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2202bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product E3 ubiquitin-protein ligase UPL5 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037300.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    ATGCGTAAAG ACGACACCGA GTCATCCACC GGCAACAATC AAGAACAACA ACAACCTCCC 
    TCCATCTCCT CCACCAATCA GCTCTCCACA CGTGTCTCCG ACGCCTCCAC CTCTTCATCA 
    TCCACCAACT TCCCCTCCTC CGCCATGCGG ACCACCACAC CCTCGCCGCT GCGGCTGTCG 
    CAATCAAGAC TCCAATTCTT TATCAGAATC ATCTCCGAAG CAACTCATGT TGTGATCAAC 
    GCGAACTCGA GCGATTCTGT TAAATCACTC CACGAACGGA TTCGCGTGAT GACCGGAATT 
    CCGGTGATAG AGCAGAGATT AATCTACTTA GGTAAGCAAT TGCAATACGA GAACAAACTC 
    TCCGATTACT CTATTGAGAA CGATTCGATC CTTCATTTAG TCGGTCGAAT GCGTAGCACT 
    AGGCATCCTC GTACTTGTCA ATTGATTAAT GATATGGTTT CTTACATTTG TCGGATATGT 
    AAGTCTATAT TGCCGTGTGG TGCTCATCCT TACACGTCAA AGCATATAAA GGAGTTGATG 
    AATGAGTTCT TTAGTTTGAC GCCCAAGGAT AATAACGAGG ATGCTTCTGG GCACTTGGAT 
    GTTTTTTTGT CCAATAGTGC ACCGGCTGTG CTAGTTGCAC TTTATGTTTC GAGTATTAAA 
    GGGAATAAGG AGTGTGCGGA GGGTGCTATT AGGCACTTTT TGAATTCGTG TAGGATTTCG 
    TTGCCTAAGA ATTTGCATTT ACAGTGTGTG CCGATTGTGA TGGAGTTTTG TAATTTGTTG 
    AGGAAGGTTG GGAGTGACGA TCCATTGTAT GTTGTTTGTA GGAGTTGTCT TGGTTCGTTG 
    TTGGAGAATG GTAGGGGTAC GTGTGGGTGG AGGTATCATG GAGAGGAGGA GGGGAAGGGA 
    GCTGTTGTGC AGGAGATTTT TCCATTTGTT AGTGAGTTGG GGAGCAAGTT GTTTAAAGAT 
    TTGATGGGGA GTGTGGTGGA GAGTATGGGG CCATCGGAGG CTGATGTTAA GGATTTTTCG 
    GCGTTTTTGA TACCATTGCA TAGTGTGATC TCCGAGCAAA GGGGATTTAG GAGTCCAATT 
    TCGATGCCTC TGAACAAGTT GGCGTTTCAT TGTCCATTGT ATGCGAAAGA AATTGAGCAG 
    CTTCATGTGA TATTCATTGA TTTGCTGAAT ATTATGGAGA AATGTCTTGG GAAAATGCAG 
    GATTCATCGA ATTTGAAAAC GAATGGAGAA AGTGAGTTGA ATCATACAGG TTGGTCCCAA 
    TATTTGTTTA TTTTGAAGGA GTTGAATAAC ATTGCTAAAC TTTATAAGGG TGCTGAGGAA 
    AAGTTTTGGA CGGTTTTGAG GCTTAGAAAA GCTTCCTTGT GTGCGCTGAT TGTTAGATAT 
    GCTAAACAAA CTGATGATCA TCAGTGGCTT CTTCAGCATA AGGATGTGAC TGATTTTGAG 
    TCTAGGAGGC ATTTGGCTAT GATGATGTTC CCTGAGGTGA AAGAAGATTA CGAGGAGCTG 
    CACGAGATGC TCATTGATCG GTCGCAATTG TTGGCGGAGT CATTTGAGTA CATAATGCAT 
    GCCGAATCAG ATACACTGCA TGGTGGTTTA TTTATGGAAT TTAAAAATGA GGAAGCAACT 
    GGTCCTGGTG TATTGCGTGA GTGGTTTTTC TTGGTTACAC AAGCTATATT TGATCCTCAA 
    AATGCCCTTT TTGTGGCATG CCCAAGTGAT CGTAGAAGGT TCTATCCTAA TTCCGACATA 
    CGGGATGCAG ATCCATGCTT GTATAACAGC TGCAAACAGA TTCTTCAGAG GGATCCTGAG 
    TTCATTGATT CAAATGCTTT GGGGCTGACA TTTGTCAGAG AAGTTGAGGA GCTAGGATCC 
    ATAAAAGTTG TGGAACTTTG CCCTGGTGGG AAAGGCATTG TTGTAAATAG CAAGAACCGG 
    GAGAAATATG TCAATCTGCT CATTCAACAT CGCTTTGTCA CATCTATTTC TGACCCTGTA 
    TCTCGATTTG CACGTGGTTT TGCTGATATT CTTTCAAACC CTGGGGAACA GAAGCTCTTC 
    TTCCGAAGCT TGGAGCTCGA AGATCTTGAT TGGATGCTAT ATGGAAGTGA AAGTGCTATA 
    TGTGTGGAAG ACTGGAAGGC TCACACTGAG TACAGCAGCT TAATTGAAAC TGATCCTCAG 
    ATATCCTGGT TCTGGAAGGT GTGCTGCTGT TTTGCTAATT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024443406.1
    CDS354..2555
    Translation

    Target ORF information:

    RefSeq Version XM_024587638.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa E3 ubiquitin-protein ligase UPL5 (LOC7484029), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024587638.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    ATGCGTAAAG ACGACACCGA GTCATCCACC GGCAACAATC AAGAACAACA ACAACCTCCC 
    TCCATCTCCT CCACCAATCA GCTCTCCACA CGTGTCTCCG ACGCCTCCAC CTCTTCATCA 
    TCCACCAACT TCCCCTCCTC CGCCATGCGG ACCACCACAC CCTCGCCGCT GCGGCTGTCG 
    CAATCAAGAC TCCAATTCTT TATCAGAATC ATCTCCGAAG CAACTCATGT TGTGATCAAC 
    GCGAACTCGA GCGATTCTGT TAAATCACTC CACGAACGGA TTCGCGTGAT GACCGGAATT 
    CCGGTGATAG AGCAGAGATT AATCTACTTA GGTAAGCAAT TGCAATACGA GAACAAACTC 
    TCCGATTACT CTATTGAGAA CGATTCGATC CTTCATTTAG TCGGTCGAAT GCGTAGCACT 
    AGGCATCCTC GTACTTGTCA ATTGATTAAT GATATGGTTT CTTACATTTG TCGGATATGT 
    AAGTCTATAT TGCCGTGTGG TGCTCATCCT TACACGTCAA AGCATATAAA GGAGTTGATG 
    AATGAGTTCT TTAGTTTGAC GCCCAAGGAT AATAACGAGG ATGCTTCTGG GCACTTGGAT 
    GTTTTTTTGT CCAATAGTGC ACCGGCTGTG CTAGTTGCAC TTTATGTTTC GAGTATTAAA 
    GGGAATAAGG AGTGTGCGGA GGGTGCTATT AGGCACTTTT TGAATTCGTG TAGGATTTCG 
    TTGCCTAAGA ATTTGCATTT ACAGTGTGTG CCGATTGTGA TGGAGTTTTG TAATTTGTTG 
    AGGAAGGTTG GGAGTGACGA TCCATTGTAT GTTGTTTGTA GGAGTTGTCT TGGTTCGTTG 
    TTGGAGAATG GTAGGGGTAC GTGTGGGTGG AGGTATCATG GAGAGGAGGA GGGGAAGGGA 
    GCTGTTGTGC AGGAGATTTT TCCATTTGTT AGTGAGTTGG GGAGCAAGTT GTTTAAAGAT 
    TTGATGGGGA GTGTGGTGGA GAGTATGGGG CCATCGGAGG CTGATGTTAA GGATTTTTCG 
    GCGTTTTTGA TACCATTGCA TAGTGTGATC TCCGAGCAAA GGGGATTTAG GAGTCCAATT 
    TCGATGCCTC TGAACAAGTT GGCGTTTCAT TGTCCATTGT ATGCGAAAGA AATTGAGCAG 
    CTTCATGTGA TATTCATTGA TTTGCTGAAT ATTATGGAGA AATGTCTTGG GAAAATGCAG 
    GATTCATCGA ATTTGAAAAC GAATGGAGAA AGTGAGTTGA ATCATACAGG TTGGTCCCAA 
    TATTTGTTTA TTTTGAAGGA GTTGAATAAC ATTGCTAAAC TTTATAAGGG TGCTGAGGAA 
    AAGTTTTGGA CGGTTTTGAG GCTTAGAAAA GCTTCCTTGT GTGCGCTGAT TGTTAGATAT 
    GCTAAACAAA CTGATGATCA TCAGTGGCTT CTTCAGCATA AGGATGTGAC TGATTTTGAG 
    TCTAGGAGGC ATTTGGCTAT GATGATGTTC CCTGAGGTGA AAGAAGATTA CGAGGAGCTG 
    CACGAGATGC TCATTGATCG GTCGCAATTG TTGGCGGAGT CATTTGAGTA CATAATGCAT 
    GCCGAATCAG ATACACTGCA TGGTGGTTTA TTTATGGAAT TTAAAAATGA GGAAGCAACT 
    GGTCCTGGTG TATTGCGTGA GTGGTTTTTC TTGGTTACAC AAGCTATATT TGATCCTCAA 
    AATGCCCTTT TTGTGGCATG CCCAAGTGAT CGTAGAAGGT TCTATCCTAA TTCCGACATA 
    CGGGATGCAG ATCCATGCTT GTATAACAGC TGCAAACAGA TTCTTCAGAG GGATCCTGAG 
    TTCATTGATT CAAATGCTTT GGGGCTGACA TTTGTCAGAG AAGTTGAGGA GCTAGGATCC 
    ATAAAAGTTG TGGAACTTTG CCCTGGTGGG AAAGGCATTG TTGTAAATAG CAAGAACCGG 
    GAGAAATATG TCAATCTGCT CATTCAACAT CGCTTTGTCA CATCTATTTC TGACCCTGTA 
    TCTCGATTTG CACGTGGTTT TGCTGATATT CTTTCAAACC CTGGGGAACA GAAGCTCTTC 
    TTCCGAAGCT TGGAGCTCGA AGATCTTGAT TGGATGCTAT ATGGAAGTGA AAGTGCTATA 
    TGTGTGGAAG ACTGGAAGGC TCACACTGAG TACAGCAGCT TAATTGAAAC TGATCCTCAG 
    ATATCCTGGT TCTGGAAGGT GTGCTGCTGT TTTGCTAATT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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