POPTR_0009s05380g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0009s05380g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0009s05380g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa21632 XM_002313326.3
Latest version!
Populus trichocarpa nuclear cap-binding protein subunit 1 (LOC7482342), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $475.30
$679.00
OPa436482 XM_024608763.1
Latest version!
Populus trichocarpa nuclear cap-binding protein subunit 1 (LOC7482342), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $475.30
$679.00
View Old Accession Versions >>
OPa21632 XM_002313326.2 Populus trichocarpa hypothetical protein (POPTR_0009s05380g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $475.30
$679.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OPa21632
    Clone ID Related Accession (Same CDS sequence) XM_002313326.3 , XM_002313326.2
    Accession Version XM_002313326.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2607bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product nuclear cap-binding protein subunit 1 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037293.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002313326.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGAGCAGCT GGAGAAGTCT CCTTCTTCGA ATCGGCGACA ACTGCCCCGA CTATGGCACC 
    AGCTCCGACT TCAAAGAACA CATTGAAACT TGCTTCGGTG TTATTCGGCG AGAGTTGGAG
    CACTCTTCTA ACGATATTTT ATCTTTCCTT CTCCAGTGTG CTGAACAGTT GCCTCACAAG
    ATTCCTTTAT ATGGAACTTT GGTTGGCCTA TTGAACTTGG AGAATGAGGA CTTCGTGAAG
    CAAATGGTGG AGGCAACTCA AGCTAATTTT CAGGATGCCC TAGATTTTGG AAACTGTGAC
    ATGATTCGCA TTTTGATGCG CTTTCTTACT GTTATGATGT GCAGTAAAGT TCTCCAACCT
    TCTTCTCTGG TAGTTGTCTT TGAAACACTC TTATCATCTG CTGCCACAAC ATTGGATGAA
    GAGAAAGGAA ATCCTTCCTG GCAAGCCCGT GGGGACTTTT ATGTAAGCTG CATTTTATCC
    TGTCTTCCAT GGGGAGGATC AGAGCTTGTT GAGCAAGTTC CTGAGGAGAT TGAGAGCGTC
    ATGGTTGGTA TAGAAGCTTA TTTGAGCATT AGAAGGCATA ATTCTGATAC CGGATTGTCT
    TTTTTTGAGG ATGATGATGA ATCTGGGAGG GCTGTTGTTG AGAAGGATTT CTTGGAAGAT
    TTATGGGGTC GGATTCAAGT ACTATCTAGC AATGGATGGA AAGTAGACAG TGTACCCAGA
    CCTCATCTCT CGTTTGAAGC TCAGCTGGTT GCTGGGAAGT CTCATGAGTT CGGGCCCATC
    AACACTCCTG AGCAACCTGA GCCACTTTCA GAAGTCTCTG GGGTACTTTA TGGTAAACAG
    AAGCATGATG CAGAGTTAAA GTATCCTCAA AGGATACGCA GGCTTAATAT ATTTCCCGCG
    AGTAAAATTG AGGATATGCA ACCCATAGAT CGCTTCATTG TGGAAGAGTA CTTGCTGGAT
    GTACTTTTGT TCCTCAATGG ATGTCGAAAG GAATGTGCTT CGTTCATGGT TGGCCTGCCT
    GTACCATTTC GTTACGACTA TCTCATGGCA GAGACAATTT TCTCTCAGTT ACTTTTGCTA
    CCATTACCAC CTTTCAAGCC AATATATTAC ACACTTGTGA TAATGGACCT TTGTAAGGCT
    CTTCCTGGAG CCTTCCCTGG AGTTGTAGCT GGTGCAGTTC GTGCACTTTT TGAGAAAATA
    GCTGATTTAG ATACGGAGTG TCAGACAAGG CTCATCCTTT GGTTTTCACA CCATCTGTCA
    AACTTTCAAT TCATCTGGCC ATGGGAAGAG TGGGCTTTTG TTTTAGACCT ACCTAAGTGG
    GCCCCACAGC GTGTGTTTGT TCAAGAGGTC TTGGAAAGAG AAGTCCGTCT GTCATACTGG
    GACAAAGTTA AGCAGAGCAT TGAGAATGCA CCTGCTTTAG AAGAGTTGCT TCCACCAAAG
    GGTAGTCCAA ACTTTATATA CAGCATCGAA GATGGTAGAG AAAAAACTGA GCAGCATGCT
    TTGTCTGCAG AGCTCAACAA CAAGGTGAAG GCAAGGCAAA CTGCTCGAGA AATAATCTCA
    TGGGTAGAAG AAAGTGTAGT TCCTAATCAT GGTTGGGACG TCGCCCTTAA AGTGGTTGTA
    CATACCCTTC TTGAAATCGG TTCTAAAAGT TTCACTCATT TGATCACTGT TTTGGAGAGA
    TATGGCCAAG TATTTGCACG AATTTGTCCT GATCATGATA AGCAGGTCAT GCTGATAGCT
    GAAGTTAGTT CATATTGGAA GAACAATGCT CAAATGACTG CCATAGCAAT TGACAGAATG
    ATGGGTTATC GACTAATTTC TAATTTGGCA ATTGTGAGAT GGGTATTTTC TCCAGCAAAC
    ATTGAGCAAT TTCATACATC TGATCGTCCA TGGGAGGTTC TTAGAAATGC TATCAGCAAG
    ACTTATAACC GTATATCTGA TCTAAGAAAC GAGATATCAT CTCTTAAGAA GAGTGTTGTA
    TCAGCTGAAG AAGCAGCGAC AAAGGCAAAA ACAGAGTTAG ATGCTGCTGA GTCAAAGCTC
    TCTCTTGTGG ATGGTGAGCC TGTTCTTGGT GATAACCCTG CGAGGTTGAA GCGCTTGAAA
    GCAAATGCTG AAAAGGCAAA AGAAGAAGAG GTGTCTGTGC ATGAGTCTTT GGAGGCCAAG
    GAGGCTCTTC TTGCTCGTGC CCTTGATGAA AATGAGGCAT TGTTCCTCTC TTTGTACAAA
    AACTTCTCAA ATGTGTTGAT GGAACGTCTA CCTGATCCAT CTAGAGCTCG AACATTGCGG
    GAATTAAAGT CAATTCAAGC AGATGAAATG ACCGTTGATC TCGATGAATC ATCAGTAATG
    GAAGTGGATA ATGAGAGTGG GAGACCCAAC AAAAGTCAGT CGAATGGAGG AAAGGAAAGC
    AACATCTATA ATGTGGGAGA GAAAGAGCAA TGGTGTTTAT CAACTCTCGG CTATGTCAAG
    GCCTTTGCAA GACAGTATGC TTCTGAGATA TGGGCTCACA TCGAGAAGCT AGATGCAGAT
    GTATTCACAG AAAATGTGCA TCCTCTTTTC AAGAAAGCAG TTTATTCTGG TTTGAGTCGG
    CCAATCAATG ATGTGTCATC TGGCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002313362.2
    CDS103..2709
    Translation

    Target ORF information:

    RefSeq Version XM_002313326.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa nuclear cap-binding protein subunit 1 (LOC7482342), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002313326.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGAGCAGCT GGAGAAGTCT CCTTCTTCGA ATCGGCGACA ACTGCCCCGA CTATGGCACC 
    AGCTCCGACT TCAAAGAACA CATTGAAACT TGCTTCGGTG TTATTCGGCG AGAGTTGGAG
    CACTCTTCTA ACGATATTTT ATCTTTCCTT CTCCAGTGTG CTGAACAGTT GCCTCACAAG
    ATTCCTTTAT ATGGAACTTT GGTTGGCCTA TTGAACTTGG AGAATGAGGA CTTCGTGAAG
    CAAATGGTGG AGGCAACTCA AGCTAATTTT CAGGATGCCC TAGATTTTGG AAACTGTGAC
    ATGATTCGCA TTTTGATGCG CTTTCTTACT GTTATGATGT GCAGTAAAGT TCTCCAACCT
    TCTTCTCTGG TAGTTGTCTT TGAAACACTC TTATCATCTG CTGCCACAAC ATTGGATGAA
    GAGAAAGGAA ATCCTTCCTG GCAAGCCCGT GGGGACTTTT ATGTAAGCTG CATTTTATCC
    TGTCTTCCAT GGGGAGGATC AGAGCTTGTT GAGCAAGTTC CTGAGGAGAT TGAGAGCGTC
    ATGGTTGGTA TAGAAGCTTA TTTGAGCATT AGAAGGCATA ATTCTGATAC CGGATTGTCT
    TTTTTTGAGG ATGATGATGA ATCTGGGAGG GCTGTTGTTG AGAAGGATTT CTTGGAAGAT
    TTATGGGGTC GGATTCAAGT ACTATCTAGC AATGGATGGA AAGTAGACAG TGTACCCAGA
    CCTCATCTCT CGTTTGAAGC TCAGCTGGTT GCTGGGAAGT CTCATGAGTT CGGGCCCATC
    AACACTCCTG AGCAACCTGA GCCACTTTCA GAAGTCTCTG GGGTACTTTA TGGTAAACAG
    AAGCATGATG CAGAGTTAAA GTATCCTCAA AGGATACGCA GGCTTAATAT ATTTCCCGCG
    AGTAAAATTG AGGATATGCA ACCCATAGAT CGCTTCATTG TGGAAGAGTA CTTGCTGGAT
    GTACTTTTGT TCCTCAATGG ATGTCGAAAG GAATGTGCTT CGTTCATGGT TGGCCTGCCT
    GTACCATTTC GTTACGACTA TCTCATGGCA GAGACAATTT TCTCTCAGTT ACTTTTGCTA
    CCATTACCAC CTTTCAAGCC AATATATTAC ACACTTGTGA TAATGGACCT TTGTAAGGCT
    CTTCCTGGAG CCTTCCCTGG AGTTGTAGCT GGTGCAGTTC GTGCACTTTT TGAGAAAATA
    GCTGATTTAG ATACGGAGTG TCAGACAAGG CTCATCCTTT GGTTTTCACA CCATCTGTCA
    AACTTTCAAT TCATCTGGCC ATGGGAAGAG TGGGCTTTTG TTTTAGACCT ACCTAAGTGG
    GCCCCACAGC GTGTGTTTGT TCAAGAGGTC TTGGAAAGAG AAGTCCGTCT GTCATACTGG
    GACAAAGTTA AGCAGAGCAT TGAGAATGCA CCTGCTTTAG AAGAGTTGCT TCCACCAAAG
    GGTAGTCCAA ACTTTATATA CAGCATCGAA GATGGTAGAG AAAAAACTGA GCAGCATGCT
    TTGTCTGCAG AGCTCAACAA CAAGGTGAAG GCAAGGCAAA CTGCTCGAGA AATAATCTCA
    TGGGTAGAAG AAAGTGTAGT TCCTAATCAT GGTTGGGACG TCGCCCTTAA AGTGGTTGTA
    CATACCCTTC TTGAAATCGG TTCTAAAAGT TTCACTCATT TGATCACTGT TTTGGAGAGA
    TATGGCCAAG TATTTGCACG AATTTGTCCT GATCATGATA AGCAGGTCAT GCTGATAGCT
    GAAGTTAGTT CATATTGGAA GAACAATGCT CAAATGACTG CCATAGCAAT TGACAGAATG
    ATGGGTTATC GACTAATTTC TAATTTGGCA ATTGTGAGAT GGGTATTTTC TCCAGCAAAC
    ATTGAGCAAT TTCATACATC TGATCGTCCA TGGGAGGTTC TTAGAAATGC TATCAGCAAG
    ACTTATAACC GTATATCTGA TCTAAGAAAC GAGATATCAT CTCTTAAGAA GAGTGTTGTA
    TCAGCTGAAG AAGCAGCGAC AAAGGCAAAA ACAGAGTTAG ATGCTGCTGA GTCAAAGCTC
    TCTCTTGTGG ATGGTGAGCC TGTTCTTGGT GATAACCCTG CGAGGTTGAA GCGCTTGAAA
    GCAAATGCTG AAAAGGCAAA AGAAGAAGAG GTGTCTGTGC ATGAGTCTTT GGAGGCCAAG
    GAGGCTCTTC TTGCTCGTGC CCTTGATGAA AATGAGGCAT TGTTCCTCTC TTTGTACAAA
    AACTTCTCAA ATGTGTTGAT GGAACGTCTA CCTGATCCAT CTAGAGCTCG AACATTGCGG
    GAATTAAAGT CAATTCAAGC AGATGAAATG ACCGTTGATC TCGATGAATC ATCAGTAATG
    GAAGTGGATA ATGAGAGTGG GAGACCCAAC AAAAGTCAGT CGAATGGAGG AAAGGAAAGC
    AACATCTATA ATGTGGGAGA GAAAGAGCAA TGGTGTTTAT CAACTCTCGG CTATGTCAAG
    GCCTTTGCAA GACAGTATGC TTCTGAGATA TGGGCTCACA TCGAGAAGCT AGATGCAGAT
    GTATTCACAG AAAATGTGCA TCCTCTTTTC AAGAAAGCAG TTTATTCTGG TTTGAGTCGG
    CCAATCAATG ATGTGTCATC TGGCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa21632
    Clone ID Related Accession (Same CDS sequence) XM_002313326.3 , XM_002313326.2
    Accession Version XM_002313326.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2607bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008475). On Dec 16, 2013 this sequence version replaced XM_002313326.1.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGAGCAGCT GGAGAAGTCT CCTTCTTCGA ATCGGCGACA ACTGCCCCGA CTATGGCACC 
    AGCTCCGACT TCAAAGAACA CATTGAAACT TGCTTCGGTG TTATTCGGCG AGAGTTGGAG
    CACTCTTCTA ACGATATTTT ATCTTTCCTT CTCCAGTGTG CTGAACAGTT GCCTCACAAG
    ATTCCTTTAT ATGGAACTTT GGTTGGCCTA TTGAACTTGG AGAATGAGGA CTTCGTGAAG
    CAAATGGTGG AGGCAACTCA AGCTAATTTT CAGGATGCCC TAGATTTTGG AAACTGTGAC
    ATGATTCGCA TTTTGATGCG CTTTCTTACT GTTATGATGT GCAGTAAAGT TCTCCAACCT
    TCTTCTCTGG TAGTTGTCTT TGAAACACTC TTATCATCTG CTGCCACAAC ATTGGATGAA
    GAGAAAGGAA ATCCTTCCTG GCAAGCCCGT GGGGACTTTT ATGTAAGCTG CATTTTATCC
    TGTCTTCCAT GGGGAGGATC AGAGCTTGTT GAGCAAGTTC CTGAGGAGAT TGAGAGCGTC
    ATGGTTGGTA TAGAAGCTTA TTTGAGCATT AGAAGGCATA ATTCTGATAC CGGATTGTCT
    TTTTTTGAGG ATGATGATGA ATCTGGGAGG GCTGTTGTTG AGAAGGATTT CTTGGAAGAT
    TTATGGGGTC GGATTCAAGT ACTATCTAGC AATGGATGGA AAGTAGACAG TGTACCCAGA
    CCTCATCTCT CGTTTGAAGC TCAGCTGGTT GCTGGGAAGT CTCATGAGTT CGGGCCCATC
    AACACTCCTG AGCAACCTGA GCCACTTTCA GAAGTCTCTG GGGTACTTTA TGGTAAACAG
    AAGCATGATG CAGAGTTAAA GTATCCTCAA AGGATACGCA GGCTTAATAT ATTTCCCGCG
    AGTAAAATTG AGGATATGCA ACCCATAGAT CGCTTCATTG TGGAAGAGTA CTTGCTGGAT
    GTACTTTTGT TCCTCAATGG ATGTCGAAAG GAATGTGCTT CGTTCATGGT TGGCCTGCCT
    GTACCATTTC GTTACGACTA TCTCATGGCA GAGACAATTT TCTCTCAGTT ACTTTTGCTA
    CCATTACCAC CTTTCAAGCC AATATATTAC ACACTTGTGA TAATGGACCT TTGTAAGGCT
    CTTCCTGGAG CCTTCCCTGG AGTTGTAGCT GGTGCAGTTC GTGCACTTTT TGAGAAAATA
    GCTGATTTAG ATACGGAGTG TCAGACAAGG CTCATCCTTT GGTTTTCACA CCATCTGTCA
    AACTTTCAAT TCATCTGGCC ATGGGAAGAG TGGGCTTTTG TTTTAGACCT ACCTAAGTGG
    GCCCCACAGC GTGTGTTTGT TCAAGAGGTC TTGGAAAGAG AAGTCCGTCT GTCATACTGG
    GACAAAGTTA AGCAGAGCAT TGAGAATGCA CCTGCTTTAG AAGAGTTGCT TCCACCAAAG
    GGTAGTCCAA ACTTTATATA CAGCATCGAA GATGGTAGAG AAAAAACTGA GCAGCATGCT
    TTGTCTGCAG AGCTCAACAA CAAGGTGAAG GCAAGGCAAA CTGCTCGAGA AATAATCTCA
    TGGGTAGAAG AAAGTGTAGT TCCTAATCAT GGTTGGGACG TCGCCCTTAA AGTGGTTGTA
    CATACCCTTC TTGAAATCGG TTCTAAAAGT TTCACTCATT TGATCACTGT TTTGGAGAGA
    TATGGCCAAG TATTTGCACG AATTTGTCCT GATCATGATA AGCAGGTCAT GCTGATAGCT
    GAAGTTAGTT CATATTGGAA GAACAATGCT CAAATGACTG CCATAGCAAT TGACAGAATG
    ATGGGTTATC GACTAATTTC TAATTTGGCA ATTGTGAGAT GGGTATTTTC TCCAGCAAAC
    ATTGAGCAAT TTCATACATC TGATCGTCCA TGGGAGGTTC TTAGAAATGC TATCAGCAAG
    ACTTATAACC GTATATCTGA TCTAAGAAAC GAGATATCAT CTCTTAAGAA GAGTGTTGTA
    TCAGCTGAAG AAGCAGCGAC AAAGGCAAAA ACAGAGTTAG ATGCTGCTGA GTCAAAGCTC
    TCTCTTGTGG ATGGTGAGCC TGTTCTTGGT GATAACCCTG CGAGGTTGAA GCGCTTGAAA
    GCAAATGCTG AAAAGGCAAA AGAAGAAGAG GTGTCTGTGC ATGAGTCTTT GGAGGCCAAG
    GAGGCTCTTC TTGCTCGTGC CCTTGATGAA AATGAGGCAT TGTTCCTCTC TTTGTACAAA
    AACTTCTCAA ATGTGTTGAT GGAACGTCTA CCTGATCCAT CTAGAGCTCG AACATTGCGG
    GAATTAAAGT CAATTCAAGC AGATGAAATG ACCGTTGATC TCGATGAATC ATCAGTAATG
    GAAGTGGATA ATGAGAGTGG GAGACCCAAC AAAAGTCAGT CGAATGGAGG AAAGGAAAGC
    AACATCTATA ATGTGGGAGA GAAAGAGCAA TGGTGTTTAT CAACTCTCGG CTATGTCAAG
    GCCTTTGCAA GACAGTATGC TTCTGAGATA TGGGCTCACA TCGAGAAGCT AGATGCAGAT
    GTATTCACAG AAAATGTGCA TCCTCTTTTC AAGAAAGCAG TTTATTCTGG TTTGAGTCGG
    CCAATCAATG ATGTGTCATC TGGCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002313362.2
    CDS46..2652
    Translation

    Target ORF information:

    RefSeq Version XM_002313326.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0009s05380g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002313326.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGAGCAGCT GGAGAAGTCT CCTTCTTCGA ATCGGCGACA ACTGCCCCGA CTATGGCACC 
    AGCTCCGACT TCAAAGAACA CATTGAAACT TGCTTCGGTG TTATTCGGCG AGAGTTGGAG
    CACTCTTCTA ACGATATTTT ATCTTTCCTT CTCCAGTGTG CTGAACAGTT GCCTCACAAG
    ATTCCTTTAT ATGGAACTTT GGTTGGCCTA TTGAACTTGG AGAATGAGGA CTTCGTGAAG
    CAAATGGTGG AGGCAACTCA AGCTAATTTT CAGGATGCCC TAGATTTTGG AAACTGTGAC
    ATGATTCGCA TTTTGATGCG CTTTCTTACT GTTATGATGT GCAGTAAAGT TCTCCAACCT
    TCTTCTCTGG TAGTTGTCTT TGAAACACTC TTATCATCTG CTGCCACAAC ATTGGATGAA
    GAGAAAGGAA ATCCTTCCTG GCAAGCCCGT GGGGACTTTT ATGTAAGCTG CATTTTATCC
    TGTCTTCCAT GGGGAGGATC AGAGCTTGTT GAGCAAGTTC CTGAGGAGAT TGAGAGCGTC
    ATGGTTGGTA TAGAAGCTTA TTTGAGCATT AGAAGGCATA ATTCTGATAC CGGATTGTCT
    TTTTTTGAGG ATGATGATGA ATCTGGGAGG GCTGTTGTTG AGAAGGATTT CTTGGAAGAT
    TTATGGGGTC GGATTCAAGT ACTATCTAGC AATGGATGGA AAGTAGACAG TGTACCCAGA
    CCTCATCTCT CGTTTGAAGC TCAGCTGGTT GCTGGGAAGT CTCATGAGTT CGGGCCCATC
    AACACTCCTG AGCAACCTGA GCCACTTTCA GAAGTCTCTG GGGTACTTTA TGGTAAACAG
    AAGCATGATG CAGAGTTAAA GTATCCTCAA AGGATACGCA GGCTTAATAT ATTTCCCGCG
    AGTAAAATTG AGGATATGCA ACCCATAGAT CGCTTCATTG TGGAAGAGTA CTTGCTGGAT
    GTACTTTTGT TCCTCAATGG ATGTCGAAAG GAATGTGCTT CGTTCATGGT TGGCCTGCCT
    GTACCATTTC GTTACGACTA TCTCATGGCA GAGACAATTT TCTCTCAGTT ACTTTTGCTA
    CCATTACCAC CTTTCAAGCC AATATATTAC ACACTTGTGA TAATGGACCT TTGTAAGGCT
    CTTCCTGGAG CCTTCCCTGG AGTTGTAGCT GGTGCAGTTC GTGCACTTTT TGAGAAAATA
    GCTGATTTAG ATACGGAGTG TCAGACAAGG CTCATCCTTT GGTTTTCACA CCATCTGTCA
    AACTTTCAAT TCATCTGGCC ATGGGAAGAG TGGGCTTTTG TTTTAGACCT ACCTAAGTGG
    GCCCCACAGC GTGTGTTTGT TCAAGAGGTC TTGGAAAGAG AAGTCCGTCT GTCATACTGG
    GACAAAGTTA AGCAGAGCAT TGAGAATGCA CCTGCTTTAG AAGAGTTGCT TCCACCAAAG
    GGTAGTCCAA ACTTTATATA CAGCATCGAA GATGGTAGAG AAAAAACTGA GCAGCATGCT
    TTGTCTGCAG AGCTCAACAA CAAGGTGAAG GCAAGGCAAA CTGCTCGAGA AATAATCTCA
    TGGGTAGAAG AAAGTGTAGT TCCTAATCAT GGTTGGGACG TCGCCCTTAA AGTGGTTGTA
    CATACCCTTC TTGAAATCGG TTCTAAAAGT TTCACTCATT TGATCACTGT TTTGGAGAGA
    TATGGCCAAG TATTTGCACG AATTTGTCCT GATCATGATA AGCAGGTCAT GCTGATAGCT
    GAAGTTAGTT CATATTGGAA GAACAATGCT CAAATGACTG CCATAGCAAT TGACAGAATG
    ATGGGTTATC GACTAATTTC TAATTTGGCA ATTGTGAGAT GGGTATTTTC TCCAGCAAAC
    ATTGAGCAAT TTCATACATC TGATCGTCCA TGGGAGGTTC TTAGAAATGC TATCAGCAAG
    ACTTATAACC GTATATCTGA TCTAAGAAAC GAGATATCAT CTCTTAAGAA GAGTGTTGTA
    TCAGCTGAAG AAGCAGCGAC AAAGGCAAAA ACAGAGTTAG ATGCTGCTGA GTCAAAGCTC
    TCTCTTGTGG ATGGTGAGCC TGTTCTTGGT GATAACCCTG CGAGGTTGAA GCGCTTGAAA
    GCAAATGCTG AAAAGGCAAA AGAAGAAGAG GTGTCTGTGC ATGAGTCTTT GGAGGCCAAG
    GAGGCTCTTC TTGCTCGTGC CCTTGATGAA AATGAGGCAT TGTTCCTCTC TTTGTACAAA
    AACTTCTCAA ATGTGTTGAT GGAACGTCTA CCTGATCCAT CTAGAGCTCG AACATTGCGG
    GAATTAAAGT CAATTCAAGC AGATGAAATG ACCGTTGATC TCGATGAATC ATCAGTAATG
    GAAGTGGATA ATGAGAGTGG GAGACCCAAC AAAAGTCAGT CGAATGGAGG AAAGGAAAGC
    AACATCTATA ATGTGGGAGA GAAAGAGCAA TGGTGTTTAT CAACTCTCGG CTATGTCAAG
    GCCTTTGCAA GACAGTATGC TTCTGAGATA TGGGCTCACA TCGAGAAGCT AGATGCAGAT
    GTATTCACAG AAAATGTGCA TCCTCTTTTC AAGAAAGCAG TTTATTCTGG TTTGAGTCGG
    CCAATCAATG ATGTGTCATC TGGCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa436482
    Clone ID Related Accession (Same CDS sequence) XM_024608763.1
    Accession Version XM_024608763.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2610bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product nuclear cap-binding protein subunit 1 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037293.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGAGCAGCT GGAGAAGTCT CCTTCTTCGA ATCGGCGACA ACTGCCCCGA CTATGGCACC 
    AGCTCCGACT TCAAAGAACA CATTGAAACT TGCTTCGGTG TTATTCGGCG AGAGTTGGAG
    CACTCTTCTA ACGATATTTT ATCTTTCCTT CTCCAGTGTG CTGAACAGTT GCCTCACAAG
    ATTCCTTTAT ATGGAACTTT GGTTGGCCTA TTGAACTTGG AGAATGAGGA CTTCGTGAAG
    CAAATGGTGG AGGCAACTCA AGCTAATTTT CAGGATGCCC TAGATTTTGG AAACTGTGAC
    ATGATTCGCA TTTTGATGCG CTTTCTTACT GTTATGATGT GCAGTAAAGT TCTCCAACCT
    TCTTCTCTGG TAGTTGTCTT TGAAACACTC TTATCATCTG CTGCCACAAC ATTGGATGAA
    GAGAAAGGAA ATCCTTCCTG GCAAGCCCGT GGGGACTTTT ATGTAAGCTG CATTTTATCC
    TGTCTTCCAT GGGGAGGATC AGAGCTTGTT GAGCAAGTTC CTGAGGAGAT TGAGAGCGTC
    ATGGTTGGTA TAGAAGCTTA TTTGAGCATT AGAAGGCATA ATTCTGATAC CGGATTGTCT
    TTTTTTGAGG ATGATGATGA ATCTGGGAGG GCTGTTGTTG AGAAGGATTT CTTGGAAGAT
    TTATGGGGTC GGATTCAAGT ACTATCTAGC AATGGATGGA AAGTAGACAG TGTACCCAGA
    CCTCATCTCT CGTTTGAAGC TCAGCTGGTT GCTGGGAAGT CTCATGAGTT CGGGCCCATC
    AACACTCCTG AGCAACCTGA GCCACTTTCA GAAGTCTCTG GGGTACTTTA TGGTAAACAG
    AAGCATGATG CAGAGTTAAA GTATCCTCAA AGGATACGCA GGCTTAATAT ATTTCCCGCG
    AGTAAAATTG AGGATATGCA ACCCATAGAT CGCTTCATTG TGGAAGAGTA CTTGCTGGAT
    GTACTTTTGT TCCTCAATGG ATGTCGAAAG GAATGTGCTT CGTTCATGGT TGGCCTGCCT
    GTACCATTTC GTTACGACTA TCTCATGGCA GAGACAATTT TCTCTCAGTT ACTTTTGCTA
    CCATTACCAC CTTTCAAGCC AATATATTAC ACACTTGTGA TAATGGACCT TTGTAAGGCT
    CTTCCTGGAG CCTTCCCTGG AGTTGTAGCT GGTGCAGTTC GTGCACTTTT TGAGAAAATA
    GCTGATTTAG ATACGGAGTG TCAGACAAGG CTCATCCTTT GGTTTTCACA CCATCTGTCA
    AACTTTCAAT TCATCTGGCC ATGGGAAGAG TGGGCTTTTG TTTTAGACCT ACCTAAGTGG
    GCCCCACAGC GTGTGTTTGT TCAAGAGGTC TTGGAAAGAG AAGTCCGTCT GTCATACTGG
    GACAAAGTTA AGCAGAGCAT TGAGAATGCA CCTGCTTTAG AAGAGTTGCT TCCACCAAAG
    GGTAGTCCAA ACTTTATATA CAGCATCGAA GATGGTAGAG AAAAAACTGA GCAGCATGCT
    TTGTCTGCAG AGCTCAACAA CAAGGTGAAG GCAAGGCAAA CTGCTCGAGA AATAATCTCA
    TGGGTAGAAG AAAGTGTAGT TCCTAATCAT GGTTGGGACG TCGCCCTTAA AGTGGTTGTA
    CATACCCTTC TTGAAATCGG TTCTAAAAGT TTCACTCATT TGATCACTGT TTTGGAGAGA
    TATGGCCAAG TATTTGCACG AATTTGTCCT GATCATGATA AGCAGGTCAT GCTGATAGCT
    GAAGTTAGTT CATATTGGAA GAACAATGCT CAAATGACTG CCATAGCAAT TGACAGAATG
    ATGGGTTATC GACTAATTTC TAATTTGGCA ATTGTGAGAT GGGTATTTTC TCCAGCAAAC
    ATTGAGCAAT TTCATACATC TGATCGTCCA TGGGAGGTTC TTAGAAATGC TATCAGCAAG
    ACTTATAACC GTATATCTGA TCTAAGAAAC GAGATATCAT CTCTTAAGAA GAGTGTTGTA
    TCAGCTGAAG AAGCAGCGAC AAAGGCAAAA ACAGAGTTAG ATGCTGCTGA GTCAAAGCTC
    TCTCTTGTGG ATGGTGAGCC TGTTCTTGGT GATAACCCTG CGAGGTTGAA GCGCTTGAAA
    GCAAATGCTG AAAAGGCAAA AGAAGAAGAG GTGTCTGTGC ATGAGTCTTT GGAGGCCAAG
    GAGGCTCTTC TTGCTCGTGC CCTTGATGAA AATGAGGCAT TGTTCCTCTC TTTGTACAAA
    AACTTCTCAA ATGTGTTGAT GGAACGTCTA CCTGATCCAT CTAGAGCTCG AACATTGCGG
    GAATTAAAGT CAATTCAAGC AGATGAAATG ACCGTTGATC TCGATGAATC ATCAGTAATG
    GAAGTGGATA ATGAGAGTGG GAGACCCAAC AAAAGCAGTC AGTCGAATGG AGGAAAGGAA
    AGCAACATCT ATAATGTGGG AGAGAAAGAG CAATGGTGTT TATCAACTCT CGGCTATGTC
    AAGGCCTTTG CAAGACAGTA TGCTTCTGAG ATATGGGCTC ACATCGAGAA GCTAGATGCA
    GATGTATTCA CAGAAAATGT GCATCCTCTT TTCAAGAAAG CAGTTTATTC TGGTTTGAGT
    CGGCCAATCA ATGATGTGTC ATCTGGCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024464531.1
    CDS104..2713
    Translation

    Target ORF information:

    RefSeq Version XM_024608763.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa nuclear cap-binding protein subunit 1 (LOC7482342), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_024608763.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGAGCAGCT GGAGAAGTCT CCTTCTTCGA ATCGGCGACA ACTGCCCCGA CTATGGCACC 
    AGCTCCGACT TCAAAGAACA CATTGAAACT TGCTTCGGTG TTATTCGGCG AGAGTTGGAG
    CACTCTTCTA ACGATATTTT ATCTTTCCTT CTCCAGTGTG CTGAACAGTT GCCTCACAAG
    ATTCCTTTAT ATGGAACTTT GGTTGGCCTA TTGAACTTGG AGAATGAGGA CTTCGTGAAG
    CAAATGGTGG AGGCAACTCA AGCTAATTTT CAGGATGCCC TAGATTTTGG AAACTGTGAC
    ATGATTCGCA TTTTGATGCG CTTTCTTACT GTTATGATGT GCAGTAAAGT TCTCCAACCT
    TCTTCTCTGG TAGTTGTCTT TGAAACACTC TTATCATCTG CTGCCACAAC ATTGGATGAA
    GAGAAAGGAA ATCCTTCCTG GCAAGCCCGT GGGGACTTTT ATGTAAGCTG CATTTTATCC
    TGTCTTCCAT GGGGAGGATC AGAGCTTGTT GAGCAAGTTC CTGAGGAGAT TGAGAGCGTC
    ATGGTTGGTA TAGAAGCTTA TTTGAGCATT AGAAGGCATA ATTCTGATAC CGGATTGTCT
    TTTTTTGAGG ATGATGATGA ATCTGGGAGG GCTGTTGTTG AGAAGGATTT CTTGGAAGAT
    TTATGGGGTC GGATTCAAGT ACTATCTAGC AATGGATGGA AAGTAGACAG TGTACCCAGA
    CCTCATCTCT CGTTTGAAGC TCAGCTGGTT GCTGGGAAGT CTCATGAGTT CGGGCCCATC
    AACACTCCTG AGCAACCTGA GCCACTTTCA GAAGTCTCTG GGGTACTTTA TGGTAAACAG
    AAGCATGATG CAGAGTTAAA GTATCCTCAA AGGATACGCA GGCTTAATAT ATTTCCCGCG
    AGTAAAATTG AGGATATGCA ACCCATAGAT CGCTTCATTG TGGAAGAGTA CTTGCTGGAT
    GTACTTTTGT TCCTCAATGG ATGTCGAAAG GAATGTGCTT CGTTCATGGT TGGCCTGCCT
    GTACCATTTC GTTACGACTA TCTCATGGCA GAGACAATTT TCTCTCAGTT ACTTTTGCTA
    CCATTACCAC CTTTCAAGCC AATATATTAC ACACTTGTGA TAATGGACCT TTGTAAGGCT
    CTTCCTGGAG CCTTCCCTGG AGTTGTAGCT GGTGCAGTTC GTGCACTTTT TGAGAAAATA
    GCTGATTTAG ATACGGAGTG TCAGACAAGG CTCATCCTTT GGTTTTCACA CCATCTGTCA
    AACTTTCAAT TCATCTGGCC ATGGGAAGAG TGGGCTTTTG TTTTAGACCT ACCTAAGTGG
    GCCCCACAGC GTGTGTTTGT TCAAGAGGTC TTGGAAAGAG AAGTCCGTCT GTCATACTGG
    GACAAAGTTA AGCAGAGCAT TGAGAATGCA CCTGCTTTAG AAGAGTTGCT TCCACCAAAG
    GGTAGTCCAA ACTTTATATA CAGCATCGAA GATGGTAGAG AAAAAACTGA GCAGCATGCT
    TTGTCTGCAG AGCTCAACAA CAAGGTGAAG GCAAGGCAAA CTGCTCGAGA AATAATCTCA
    TGGGTAGAAG AAAGTGTAGT TCCTAATCAT GGTTGGGACG TCGCCCTTAA AGTGGTTGTA
    CATACCCTTC TTGAAATCGG TTCTAAAAGT TTCACTCATT TGATCACTGT TTTGGAGAGA
    TATGGCCAAG TATTTGCACG AATTTGTCCT GATCATGATA AGCAGGTCAT GCTGATAGCT
    GAAGTTAGTT CATATTGGAA GAACAATGCT CAAATGACTG CCATAGCAAT TGACAGAATG
    ATGGGTTATC GACTAATTTC TAATTTGGCA ATTGTGAGAT GGGTATTTTC TCCAGCAAAC
    ATTGAGCAAT TTCATACATC TGATCGTCCA TGGGAGGTTC TTAGAAATGC TATCAGCAAG
    ACTTATAACC GTATATCTGA TCTAAGAAAC GAGATATCAT CTCTTAAGAA GAGTGTTGTA
    TCAGCTGAAG AAGCAGCGAC AAAGGCAAAA ACAGAGTTAG ATGCTGCTGA GTCAAAGCTC
    TCTCTTGTGG ATGGTGAGCC TGTTCTTGGT GATAACCCTG CGAGGTTGAA GCGCTTGAAA
    GCAAATGCTG AAAAGGCAAA AGAAGAAGAG GTGTCTGTGC ATGAGTCTTT GGAGGCCAAG
    GAGGCTCTTC TTGCTCGTGC CCTTGATGAA AATGAGGCAT TGTTCCTCTC TTTGTACAAA
    AACTTCTCAA ATGTGTTGAT GGAACGTCTA CCTGATCCAT CTAGAGCTCG AACATTGCGG
    GAATTAAAGT CAATTCAAGC AGATGAAATG ACCGTTGATC TCGATGAATC ATCAGTAATG
    GAAGTGGATA ATGAGAGTGG GAGACCCAAC AAAAGCAGTC AGTCGAATGG AGGAAAGGAA
    AGCAACATCT ATAATGTGGG AGAGAAAGAG CAATGGTGTT TATCAACTCT CGGCTATGTC
    AAGGCCTTTG CAAGACAGTA TGCTTCTGAG ATATGGGCTC ACATCGAGAA GCTAGATGCA
    GATGTATTCA CAGAAAATGT GCATCCTCTT TTCAAGAAAG CAGTTTATTC TGGTTTGAGT
    CGGCCAATCA ATGATGTGTC ATCTGGCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D