ORF » Species Summary » Populus trichocarpa » POPTR_0008s18230g cDNA ORF clone

POPTR_0008s18230g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0008s18230g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0008s18230g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa19266 XM_002312614.3
Latest version!		 Populus trichocarpa photosystem II core complex proteins psbY, chloroplastic (LOC7480941), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
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OPa19266 XM_002312614.2 Populus trichocarpa Photosystem II core complex proteins psbY (POPTR_0008s18230g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0008s18230g ( XM_002312614.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002312650.1 Populus trichocarpa photosystem II core complex proteins psbY, chloroplastic (LOC7480941), mRNA.
    Price & Availability↑
    CloneID OPa19266
    Clone ID Related Accession (Same CDS sequence) XM_002312614.3 , XM_002312614.2
    Accession Version XM_002312614.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 579bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product photosystem II core complex proteins psbY, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037292.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002312614.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

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    481
    541
    ATGGCCGCAA CCATGGCAAT ACTCAATGCA AAGTGCTTGA GCATCAACGC CAACAAGAAT 
    ACCAACCCCA TCAAGCCACC AACAAAACCC ATCTACCTTC TCGCCATGCA AAACCTCCCA 
    AAAGGTCTAA CCATCTCAAA ACCAGCTGAT AACACAGCCC TAGCCGGAAC TGCTATTGCA 
    GGTGCTATCT TCACTACCTT GAGCTCATGT GAGCCTGCTT TTGCTGCACA ACAAATAGCT 
    GAAATAGCAG AAGGTGACAA CCGCGGTTTA GCACTCTTGC TGCCGCTAAT ACCAGCCATA 
    GCTTGGGTGC TATTCAACAT CCTCCAACCA GCACTTAACC AAGTTAACCG AATGCGTGAG 
    ACCAGGGGGG TGATCATTGG GCTTGGACTT GGTGGGTTGG CTGCATCAGG TTTTATGTCA 
    ACGCCGGATG CATCAGCCAG TGAAATTGCC ATGATTGCTG AAGCAACAAG TGACAGCAGG 
    GGTACGCTTC TGTTGCTTGT TGTTGCTCCT GCTATTCTTT GGGTGCTCTA CAATATTCTA 
    CAGCCAGCTT TGAACCAAAT CAACAGGATG AGGTCCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002312650.1
    CDS161..739
    Translation

    Target ORF information:

    RefSeq Version XM_002312614.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa photosystem II core complex proteins psbY, chloroplastic (LOC7480941), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002312614.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGGCCGCAA CCATGGCAAT ACTCAATGCA AAGTGCTTGA GCATCAACGC CAACAAGAAT 
    ACCAACCCCA TCAAGCCACC AACAAAACCC ATCTACCTTC TCGCCATGCA AAACCTCCCA 
    AAAGGTCTAA CCATCTCAAA ACCAGCTGAT AACACAGCCC TAGCCGGAAC TGCTATTGCA 
    GGTGCTATCT TCACTACCTT GAGCTCATGT GAGCCTGCTT TTGCTGCACA ACAAATAGCT 
    GAAATAGCAG AAGGTGACAA CCGCGGTTTA GCACTCTTGC TGCCGCTAAT ACCAGCCATA 
    GCTTGGGTGC TATTCAACAT CCTCCAACCA GCACTTAACC AAGTTAACCG AATGCGTGAG 
    ACCAGGGGGG TGATCATTGG GCTTGGACTT GGTGGGTTGG CTGCATCAGG TTTTATGTCA 
    ACGCCGGATG CATCAGCCAG TGAAATTGCC ATGATTGCTG AAGCAACAAG TGACAGCAGG 
    GGTACGCTTC TGTTGCTTGT TGTTGCTCCT GCTATTCTTT GGGTGCTCTA CAATATTCTA 
    CAGCCAGCTT TGAACCAAAT CAACAGGATG AGGTCCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0008s18230g ( XM_002312614.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002312650.1 Populus trichocarpa Photosystem II core complex proteins psbY (POPTR_0008s18230g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa19266
    Clone ID Related Accession (Same CDS sequence) XM_002312614.3 , XM_002312614.2
    Accession Version XM_002312614.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 579bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product Photosystem II core complex proteins psbY
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008474). On Dec 16, 2013 this sequence version replaced XM_002312614.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGGCCGCAA CCATGGCAAT ACTCAATGCA AAGTGCTTGA GCATCAACGC CAACAAGAAT 
    ACCAACCCCA TCAAGCCACC AACAAAACCC ATCTACCTTC TCGCCATGCA AAACCTCCCA 
    AAAGGTCTAA CCATCTCAAA ACCAGCTGAT AACACAGCCC TAGCCGGAAC TGCTATTGCA 
    GGTGCTATCT TCACTACCTT GAGCTCATGT GAGCCTGCTT TTGCTGCACA ACAAATAGCT 
    GAAATAGCAG AAGGTGACAA CCGCGGTTTA GCACTCTTGC TGCCGCTAAT ACCAGCCATA 
    GCTTGGGTGC TATTCAACAT CCTCCAACCA GCACTTAACC AAGTTAACCG AATGCGTGAG 
    ACCAGGGGGG TGATCATTGG GCTTGGACTT GGTGGGTTGG CTGCATCAGG TTTTATGTCA 
    ACGCCGGATG CATCAGCCAG TGAAATTGCC ATGATTGCTG AAGCAACAAG TGACAGCAGG 
    GGTACGCTTC TGTTGCTTGT TGTTGCTCCT GCTATTCTTT GGGTGCTCTA CAATATTCTA 
    CAGCCAGCTT TGAACCAAAT CAACAGGATG AGGTCCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002312650.1
    CDS162..740
    Translation

    Target ORF information:

    RefSeq Version XM_002312614.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa Photosystem II core complex proteins psbY (POPTR_0008s18230g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002312614.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGGCCGCAA CCATGGCAAT ACTCAATGCA AAGTGCTTGA GCATCAACGC CAACAAGAAT 
    ACCAACCCCA TCAAGCCACC AACAAAACCC ATCTACCTTC TCGCCATGCA AAACCTCCCA 
    AAAGGTCTAA CCATCTCAAA ACCAGCTGAT AACACAGCCC TAGCCGGAAC TGCTATTGCA 
    GGTGCTATCT TCACTACCTT GAGCTCATGT GAGCCTGCTT TTGCTGCACA ACAAATAGCT 
    GAAATAGCAG AAGGTGACAA CCGCGGTTTA GCACTCTTGC TGCCGCTAAT ACCAGCCATA 
    GCTTGGGTGC TATTCAACAT CCTCCAACCA GCACTTAACC AAGTTAACCG AATGCGTGAG 
    ACCAGGGGGG TGATCATTGG GCTTGGACTT GGTGGGTTGG CTGCATCAGG TTTTATGTCA 
    ACGCCGGATG CATCAGCCAG TGAAATTGCC ATGATTGCTG AAGCAACAAG TGACAGCAGG 
    GGTACGCTTC TGTTGCTTGT TGTTGCTCCT GCTATTCTTT GGGTGCTCTA CAATATTCTA 
    CAGCCAGCTT TGAACCAAAT CAACAGGATG AGGTCCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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