ORF » Species Summary » Populus trichocarpa » LOC7479880 cDNA ORF clone

LOC7479880 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7479880 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7479880 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa19201 XM_002311050.3
Latest version!		 Populus trichocarpa dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B (LOC7479880), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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OPa19201 XM_002311050.2 Populus trichocarpa ribophorin 1 family protein (POPTR_0008s03860g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7479880 ( XM_002311050.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002311086.1 Populus trichocarpa ribophorin 1 family protein (POPTR_0008s03860g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa19201
    Clone ID Related Accession (Same CDS sequence) XM_002311050.2 , XM_002311050.3
    Accession Version XM_002311050.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1410bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product ribophorin 1 family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008474). On Dec 16, 2013 this sequence version replaced XM_002311050.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGCGAGTT CAACATCCAT GGAAGCAGCG GGACTCACTC TACCTTTCTT GATCCTCACA 
    TTTCTCACAA TTTCCGCTGC ATCCTCAACT AACCAGATCC AAATCCTTAA CGCTGAACGT 
    AGAATTGACT TGAGTTCACA TATTGTTAAG GTCTTCTTGA CTTTAAAGGT TGAGAATGTC 
    GGGACAACCC CTGCTTCAGA AATCGTTCTT GCATTTGCAC CTGCTCAAGC TGATCATCTA 
    GCACTTGTCA AAGCACAAGC AGCTATAGGC AAGAAGAAGA AGAAAAGTTA TGTTCATCTT 
    GATGTAAACC CAACAGAGCT ACCCGATGCG CCAAATGGAA CTAAATATTT CAGTATATCT 
    TTGCTTAATC CGTTAAGTTC AGGTGAAACT GCAACTCTGG AAGTGCTTTA TATATTAACA 
    CATTCTCTGG AACCTTTCCC AGCAGAGATA AGCCAATCGG AATCACAATT AGTATATTTC 
    CGTGACAGCG CATTAATACT GTCACCATAT CATGTTAAGC AGCAAACTAC TTTTCTTAAG 
    ACACCAAGTA CAAAAGTGGA ATCATTTACA AGAGTGGAAC CCACCAAGCT TGCTGGTAGA 
    GAACTAAAGT ATGGACCATA TGAAGATCAT CCTCCATATT CATTTTCTCC AGTAATTGTT 
    CATCTTGAGA ATAACAGCCC ATTTGCTGTT GTTGAAGAGC TTTTAAGAGA AGTAGAGATA 
    TCTCACTGGG GCAACCTTCA AATAACAGAG CATTACAAAT TGGTCCATGC TGGTGCTCGA 
    CACAAAGGCG TGTTTTCCAG AGTTGAGTAT CAATCTAGGC CATCTTTTAG TGGCACATCT 
    TCCTTCAAAC ACCTTCTAGC AAGTCTACCA CCTAGGGTGC ACTCTGTGTA TTATCGGGAT 
    GACATTGGAA ACATCTCATC ATCACATTTA CGTTCAGATA ACCGTAAGTC GGAACTTGAA 
    ATCGAACCAC GGTATCCTTT ATTTGGAGGT TGGAAGGCTA CTTTTGTTAT TGGATATGGG 
    CTACCACTGG AAGACTTCCT TTTTGAGTCA CCTGATGGCA AGCGTTACCT CAACTTCAGC 
    TTCGGCTGTC CTCTTGCAGA GACTGTTGTG GACAAGTTGA CCATCAAAGT TGTGCTACCA 
    GAGGGATCAA AAGACCCTTC AGCTGTTGTT CCTTTTCCAG TGGAGCAGCG TCTAGAGACC 
    AAATATTCAT ACCTTGATGT TGTTGGGAGG ACCGTTCTGG TTCTGGAGAA TAAAAATGTA 
    GTTCCTGAGC ACATTACTCC TTTCCAGGTT TACTACACTT TCAAACCTAT ATTTATGCTA 
    GCAGAACCAT TGATGTTGGC ATCTGTATTT TTCTTGTTTT TCATGGCTTG TTTAGCTTAT 
    CTACACATTG ATCTTTCCAT ACGCAAGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002311086.1
    CDS14..1423
    Translation

    Target ORF information:

    RefSeq Version XM_002311050.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa ribophorin 1 family protein (POPTR_0008s03860g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002311050.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGCGAGTT CAACATCCAT GGAAGCAGCG GGACTCACTC TACCTTTCTT GATCCTCACA 
    TTTCTCACAA TTTCCGCTGC ATCCTCAACT AACCAGATCC AAATCCTTAA CGCTGAACGT 
    AGAATTGACT TGAGTTCACA TATTGTTAAG GTCTTCTTGA CTTTAAAGGT TGAGAATGTC 
    GGGACAACCC CTGCTTCAGA AATCGTTCTT GCATTTGCAC CTGCTCAAGC TGATCATCTA 
    GCACTTGTCA AAGCACAAGC AGCTATAGGC AAGAAGAAGA AGAAAAGTTA TGTTCATCTT 
    GATGTAAACC CAACAGAGCT ACCCGATGCG CCAAATGGAA CTAAATATTT CAGTATATCT 
    TTGCTTAATC CGTTAAGTTC AGGTGAAACT GCAACTCTGG AAGTGCTTTA TATATTAACA 
    CATTCTCTGG AACCTTTCCC AGCAGAGATA AGCCAATCGG AATCACAATT AGTATATTTC 
    CGTGACAGCG CATTAATACT GTCACCATAT CATGTTAAGC AGCAAACTAC TTTTCTTAAG 
    ACACCAAGTA CAAAAGTGGA ATCATTTACA AGAGTGGAAC CCACCAAGCT TGCTGGTAGA 
    GAACTAAAGT ATGGACCATA TGAAGATCAT CCTCCATATT CATTTTCTCC AGTAATTGTT 
    CATCTTGAGA ATAACAGCCC ATTTGCTGTT GTTGAAGAGC TTTTAAGAGA AGTAGAGATA 
    TCTCACTGGG GCAACCTTCA AATAACAGAG CATTACAAAT TGGTCCATGC TGGTGCTCGA 
    CACAAAGGCG TGTTTTCCAG AGTTGAGTAT CAATCTAGGC CATCTTTTAG TGGCACATCT 
    TCCTTCAAAC ACCTTCTAGC AAGTCTACCA CCTAGGGTGC ACTCTGTGTA TTATCGGGAT 
    GACATTGGAA ACATCTCATC ATCACATTTA CGTTCAGATA ACCGTAAGTC GGAACTTGAA 
    ATCGAACCAC GGTATCCTTT ATTTGGAGGT TGGAAGGCTA CTTTTGTTAT TGGATATGGG 
    CTACCACTGG AAGACTTCCT TTTTGAGTCA CCTGATGGCA AGCGTTACCT CAACTTCAGC 
    TTCGGCTGTC CTCTTGCAGA GACTGTTGTG GACAAGTTGA CCATCAAAGT TGTGCTACCA 
    GAGGGATCAA AAGACCCTTC AGCTGTTGTT CCTTTTCCAG TGGAGCAGCG TCTAGAGACC 
    AAATATTCAT ACCTTGATGT TGTTGGGAGG ACCGTTCTGG TTCTGGAGAA TAAAAATGTA 
    GTTCCTGAGC ACATTACTCC TTTCCAGGTT TACTACACTT TCAAACCTAT ATTTATGCTA 
    GCAGAACCAT TGATGTTGGC ATCTGTATTT TTCTTGTTTT TCATGGCTTG TTTAGCTTAT 
    CTACACATTG ATCTTTCCAT ACGCAAGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7479880 ( XM_002311050.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002311086.1 Populus trichocarpa dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B (LOC7479880), mRNA.
    Price & Availability↑
    CloneID OPa19201
    Clone ID Related Accession (Same CDS sequence) XM_002311050.2 , XM_002311050.3
    Accession Version XM_002311050.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1410bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037292.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002311050.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGCGAGTT CAACATCCAT GGAAGCAGCG GGACTCACTC TACCTTTCTT GATCCTCACA 
    TTTCTCACAA TTTCCGCTGC ATCCTCAACT AACCAGATCC AAATCCTTAA CGCTGAACGT 
    AGAATTGACT TGAGTTCACA TATTGTTAAG GTCTTCTTGA CTTTAAAGGT TGAGAATGTC 
    GGGACAACCC CTGCTTCAGA AATCGTTCTT GCATTTGCAC CTGCTCAAGC TGATCATCTA 
    GCACTTGTCA AAGCACAAGC AGCTATAGGC AAGAAGAAGA AGAAAAGTTA TGTTCATCTT 
    GATGTAAACC CAACAGAGCT ACCCGATGCG CCAAATGGAA CTAAATATTT CAGTATATCT 
    TTGCTTAATC CGTTAAGTTC AGGTGAAACT GCAACTCTGG AAGTGCTTTA TATATTAACA 
    CATTCTCTGG AACCTTTCCC AGCAGAGATA AGCCAATCGG AATCACAATT AGTATATTTC 
    CGTGACAGCG CATTAATACT GTCACCATAT CATGTTAAGC AGCAAACTAC TTTTCTTAAG 
    ACACCAAGTA CAAAAGTGGA ATCATTTACA AGAGTGGAAC CCACCAAGCT TGCTGGTAGA 
    GAACTAAAGT ATGGACCATA TGAAGATCAT CCTCCATATT CATTTTCTCC AGTAATTGTT 
    CATCTTGAGA ATAACAGCCC ATTTGCTGTT GTTGAAGAGC TTTTAAGAGA AGTAGAGATA 
    TCTCACTGGG GCAACCTTCA AATAACAGAG CATTACAAAT TGGTCCATGC TGGTGCTCGA 
    CACAAAGGCG TGTTTTCCAG AGTTGAGTAT CAATCTAGGC CATCTTTTAG TGGCACATCT 
    TCCTTCAAAC ACCTTCTAGC AAGTCTACCA CCTAGGGTGC ACTCTGTGTA TTATCGGGAT 
    GACATTGGAA ACATCTCATC ATCACATTTA CGTTCAGATA ACCGTAAGTC GGAACTTGAA 
    ATCGAACCAC GGTATCCTTT ATTTGGAGGT TGGAAGGCTA CTTTTGTTAT TGGATATGGG 
    CTACCACTGG AAGACTTCCT TTTTGAGTCA CCTGATGGCA AGCGTTACCT CAACTTCAGC 
    TTCGGCTGTC CTCTTGCAGA GACTGTTGTG GACAAGTTGA CCATCAAAGT TGTGCTACCA 
    GAGGGATCAA AAGACCCTTC AGCTGTTGTT CCTTTTCCAG TGGAGCAGCG TCTAGAGACC 
    AAATATTCAT ACCTTGATGT TGTTGGGAGG ACCGTTCTGG TTCTGGAGAA TAAAAATGTA 
    GTTCCTGAGC ACATTACTCC TTTCCAGGTT TACTACACTT TCAAACCTAT ATTTATGCTA 
    GCAGAACCAT TGATGTTGGC ATCTGTATTT TTCTTGTTTT TCATGGCTTG TTTAGCTTAT 
    CTACACATTG ATCTTTCCAT ACGCAAGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002311086.1
    CDS63..1472
    Translation

    Target ORF information:

    RefSeq Version XM_002311050.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B (LOC7479880), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002311050.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGCGAGTT CAACATCCAT GGAAGCAGCG GGACTCACTC TACCTTTCTT GATCCTCACA 
    TTTCTCACAA TTTCCGCTGC ATCCTCAACT AACCAGATCC AAATCCTTAA CGCTGAACGT 
    AGAATTGACT TGAGTTCACA TATTGTTAAG GTCTTCTTGA CTTTAAAGGT TGAGAATGTC 
    GGGACAACCC CTGCTTCAGA AATCGTTCTT GCATTTGCAC CTGCTCAAGC TGATCATCTA 
    GCACTTGTCA AAGCACAAGC AGCTATAGGC AAGAAGAAGA AGAAAAGTTA TGTTCATCTT 
    GATGTAAACC CAACAGAGCT ACCCGATGCG CCAAATGGAA CTAAATATTT CAGTATATCT 
    TTGCTTAATC CGTTAAGTTC AGGTGAAACT GCAACTCTGG AAGTGCTTTA TATATTAACA 
    CATTCTCTGG AACCTTTCCC AGCAGAGATA AGCCAATCGG AATCACAATT AGTATATTTC 
    CGTGACAGCG CATTAATACT GTCACCATAT CATGTTAAGC AGCAAACTAC TTTTCTTAAG 
    ACACCAAGTA CAAAAGTGGA ATCATTTACA AGAGTGGAAC CCACCAAGCT TGCTGGTAGA 
    GAACTAAAGT ATGGACCATA TGAAGATCAT CCTCCATATT CATTTTCTCC AGTAATTGTT 
    CATCTTGAGA ATAACAGCCC ATTTGCTGTT GTTGAAGAGC TTTTAAGAGA AGTAGAGATA 
    TCTCACTGGG GCAACCTTCA AATAACAGAG CATTACAAAT TGGTCCATGC TGGTGCTCGA 
    CACAAAGGCG TGTTTTCCAG AGTTGAGTAT CAATCTAGGC CATCTTTTAG TGGCACATCT 
    TCCTTCAAAC ACCTTCTAGC AAGTCTACCA CCTAGGGTGC ACTCTGTGTA TTATCGGGAT 
    GACATTGGAA ACATCTCATC ATCACATTTA CGTTCAGATA ACCGTAAGTC GGAACTTGAA 
    ATCGAACCAC GGTATCCTTT ATTTGGAGGT TGGAAGGCTA CTTTTGTTAT TGGATATGGG 
    CTACCACTGG AAGACTTCCT TTTTGAGTCA CCTGATGGCA AGCGTTACCT CAACTTCAGC 
    TTCGGCTGTC CTCTTGCAGA GACTGTTGTG GACAAGTTGA CCATCAAAGT TGTGCTACCA 
    GAGGGATCAA AAGACCCTTC AGCTGTTGTT CCTTTTCCAG TGGAGCAGCG TCTAGAGACC 
    AAATATTCAT ACCTTGATGT TGTTGGGAGG ACCGTTCTGG TTCTGGAGAA TAAAAATGTA 
    GTTCCTGAGC ACATTACTCC TTTCCAGGTT TACTACACTT TCAAACCTAT ATTTATGCTA 
    GCAGAACCAT TGATGTTGGC ATCTGTATTT TTCTTGTTTT TCATGGCTTG TTTAGCTTAT 
    CTACACATTG ATCTTTCCAT ACGCAAGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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