ORF » Species Summary » Populus trichocarpa » POPTR_0010s12560g cDNA ORF clone

POPTR_0010s12560g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0010s12560g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0010s12560g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa23317 XM_002314782.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0010s12560g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa438739 XM_002314782.3
Latest version!		 Populus trichocarpa probable ribose-5-phosphate isomerase 2 (LOC7475541), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0010s12560g ( XM_002314782.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002314818.1 Populus trichocarpa hypothetical protein (POPTR_0010s12560g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa23317
    Clone ID Related Accession (Same CDS sequence) XM_002314782.2
    Accession Version XM_002314782.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 798bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008476). On Dec 16, 2013 this sequence version replaced XM_002314782.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGGCTATCC CCTGTCCATC TATTTTTGGA TCAGAAATGG TACCCATTGA GTCAGGAGCC 
    ATGTCTCCTC CTCCTTCCCC ATTAATTCTA ACCCAAGACG AGCTCAAAAA AATCGCCGCC 
    TACAAAGCCG TCGAGTTTGT CCAATCCGGT ATGGTCCTCG GCCTAGGCAC CGGCTCCACT 
    GCCAAACACG CCGTCGACCG TATCGCCGAT CTCCTACACC AAGGCAAATT GAAGAACATT 
    ATAGGCATAC CCACCTCTAA AAAAACCCAC CAGCAAGCCG TGTCCCTTGG CATCCCTTTA 
    TCCGATCTCG ATTCGCATCC CATCGTTGAT CTTGCAATAG ACGGTGCTGA TGAGGTGGAC 
    TCGAATCTCA ATTTGGTTAA GGGGCGTGGT GGGTCTTTGC TTAGAGAGAA AATGATCGAG 
    AGTGCTTGCA AGAAGTTTAT TGTTATTGTT GACGAGTCTA AATTGGTGCC TCATGTTGGT 
    GCTTGTGGTG CCATGCCTGT TGAAGTTGTG CCATTTTGTT GGAAATTTAC TCAAGATAAG 
    CTACAAAGTT TGTTTGATTA CGCGGGGTGT GTTGCGAAAT TGAGGTCTAA TAATGGGGGT 
    GAAGATGGTG AGATTTTTGT TACTGATAAT GGGAACTATA TCGTGGATTT GTTTTTCAAG 
    AAGGATGTCG GGGATTTAAA GATTGCTAGT GATGCTATTC TGAGGCTAGC TGGGGCTGTG 
    GAGCATGGAA TGTTTCTTGA TATGGCAACT ACTGTTATAG TTGCAGGCGA GCTTGGAATC 
    ACTATCAAGA ATAAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002314818.1
    CDS318..1115
    Translation

    Target ORF information:

    RefSeq Version XM_002314782.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0010s12560g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002314782.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGGCTATCC CCTGTCCATC TATTTTTGGA TCAGAAATGG TACCCATTGA GTCAGGAGCC 
    ATGTCTCCTC CTCCTTCCCC ATTAATTCTA ACCCAAGACG AGCTCAAAAA AATCGCCGCC 
    TACAAAGCCG TCGAGTTTGT CCAATCCGGT ATGGTCCTCG GCCTAGGCAC CGGCTCCACT 
    GCCAAACACG CCGTCGACCG TATCGCCGAT CTCCTACACC AAGGCAAATT GAAGAACATT 
    ATAGGCATAC CCACCTCTAA AAAAACCCAC CAGCAAGCCG TGTCCCTTGG CATCCCTTTA 
    TCCGATCTCG ATTCGCATCC CATCGTTGAT CTTGCAATAG ACGGTGCTGA TGAGGTGGAC 
    TCGAATCTCA ATTTGGTTAA GGGGCGTGGT GGGTCTTTGC TTAGAGAGAA AATGATCGAG 
    AGTGCTTGCA AGAAGTTTAT TGTTATTGTT GACGAGTCTA AATTGGTGCC TCATGTTGGT 
    GCTTGTGGTG CCATGCCTGT TGAAGTTGTG CCATTTTGTT GGAAATTTAC TCAAGATAAG 
    CTACAAAGTT TGTTTGATTA CGCGGGGTGT GTTGCGAAAT TGAGGTCTAA TAATGGGGGT 
    GAAGATGGTG AGATTTTTGT TACTGATAAT GGGAACTATA TCGTGGATTT GTTTTTCAAG 
    AAGGATGTCG GGGATTTAAA GATTGCTAGT GATGCTATTC TGAGGCTAGC TGGGGCTGTG 
    GAGCATGGAA TGTTTCTTGA TATGGCAACT ACTGTTATAG TTGCAGGCGA GCTTGGAATC 
    ACTATCAAGA ATAAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0010s12560g ( XM_002314782.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002314818.2 Populus trichocarpa probable ribose-5-phosphate isomerase 2 (LOC7475541), mRNA.
    Price & Availability↑
    CloneID OPa438739
    Clone ID Related Accession (Same CDS sequence) XM_002314782.3
    Accession Version XM_002314782.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 798bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product probable ribose-5-phosphate isomerase 2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037294.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002314782.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGGCTATCC CCTGTCCATC TATTTTTGGA TCAGAAATGG TACCCATTGA GTCAGGAGCC 
    ATGTCTCCTC CTCCTTCCCC ATTAATTCTA ACCCAAGACG AGCTCAAAAA AATCGCCGCC 
    TACAAAGCCG TCGAGTTTGT CCAATCCGGT ATGGTCCTCG GCCTAGGCAC CGGCTCCACT 
    GCCAAACACG CCGTCGACCG TATCGCCGAT CTCCTACACC AAGGCAAATT GAAGAACATT 
    ATAGGCATAC CCACCTCTAA AAAAACCCAC CAGCAAGCCG TGTCCCTTGG CATCCCTTTA 
    TCCGATCTCG ATTCGCATCC CATCGTTGAT CTTGCAATCG ACGGTGCTGA TGAGGTGGAC 
    TCGAATCTCA ATTTGGTTAA GGGGCGTGGT GGGTCTTTGC TTAGAGAGAA AATGATCGAG 
    AGTGCTTGCA AGAAGTTTAT TGTTATTGTT GACGAGTCTA AATTGGTGCC TCATGTTGGT 
    GCTTGTGGTG CCATGCCTGT TGAAGTTGTG CCATTTTGTT GGAAATTTAC TCAAGATAAG 
    CTACAAAGTT TGTTTGATTA CGCGGGGTGT GTTGCGAAAT TGAGGTCTAA TAATGGGGGT 
    GAAGATGGCG AGATTTTTGT TACTGATAAT GGGAACTATA TCGTGGATTT GTTTTTCAAG 
    AAGGATGTCG GGGATTTAAA GATTGCTAGT GATGCTATTC TGAGGCTAGC TGGGGTTGTG 
    GAGCATGGAA TGTTTCTTGA TATGGCAACT ACTGTTATAG TTGCAGGCGA GCTTGGAATC 
    ACTATCAAGA ATAAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002314818.2
    CDS313..1110
    Translation

    Target ORF information:

    RefSeq Version XM_002314782.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa probable ribose-5-phosphate isomerase 2 (LOC7475541), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002314782.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGGCTATCC CCTGTCCATC TATTTTTGGA TCAGAAATGG TACCCATTGA GTCAGGAGCC 
    ATGTCTCCTC CTCCTTCCCC ATTAATTCTA ACCCAAGACG AGCTCAAAAA AATCGCCGCC 
    TACAAAGCCG TCGAGTTTGT CCAATCCGGT ATGGTCCTCG GCCTAGGCAC CGGCTCCACT 
    GCCAAACACG CCGTCGACCG TATCGCCGAT CTCCTACACC AAGGCAAATT GAAGAACATT 
    ATAGGCATAC CCACCTCTAA AAAAACCCAC CAGCAAGCCG TGTCCCTTGG CATCCCTTTA 
    TCCGATCTCG ATTCGCATCC CATCGTTGAT CTTGCAATCG ACGGTGCTGA TGAGGTGGAC 
    TCGAATCTCA ATTTGGTTAA GGGGCGTGGT GGGTCTTTGC TTAGAGAGAA AATGATCGAG 
    AGTGCTTGCA AGAAGTTTAT TGTTATTGTT GACGAGTCTA AATTGGTGCC TCATGTTGGT 
    GCTTGTGGTG CCATGCCTGT TGAAGTTGTG CCATTTTGTT GGAAATTTAC TCAAGATAAG 
    CTACAAAGTT TGTTTGATTA CGCGGGGTGT GTTGCGAAAT TGAGGTCTAA TAATGGGGGT 
    GAAGATGGCG AGATTTTTGT TACTGATAAT GGGAACTATA TCGTGGATTT GTTTTTCAAG 
    AAGGATGTCG GGGATTTAAA GATTGCTAGT GATGCTATTC TGAGGCTAGC TGGGGTTGTG 
    GAGCATGGAA TGTTTCTTGA TATGGCAACT ACTGTTATAG TTGCAGGCGA GCTTGGAATC 
    ACTATCAAGA ATAAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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