ORF » Species Summary » Populus trichocarpa » LOC7465900 cDNA ORF clone

LOC7465900 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7465900 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7465900 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa36797 XM_002325698.2
Latest version!		 Populus trichocarpa defensin-like family protein (POPTR_0019s00760g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
OPa418740 XM_024592001.1
Latest version!		 Populus trichocarpa defensin-like protein 1 (LOC7465900), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7465900 ( XM_002325698.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002325734.2 Populus trichocarpa defensin-like family protein (POPTR_0019s00760g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa36797
    Clone ID Related Accession (Same CDS sequence) XM_002325698.2
    Accession Version XM_002325698.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 231bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product defensin-like family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008485). On Dec 16, 2013 this sequence version replaced XM_002325698.1. COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    ATGGAGATCA AGAGATCCTT TGGGCTTTTC TTCTTGCTCC TCATTGTCTT GGCTTCTCCA 
    GAAGAGGTGG TGGTGCCTAC TGAGGCAAGG GTTTGCCAGT CACAGAGCCA TTATTTTAAA 
    GGCCCATGTG CTAGGGACCA TAACTGTGCA TGGGTGTGCA GGAATGAAGG TTTCTCTGGG 
    GGAAGATGCA AAGGGTTCCG TCGCCGCTGT TTTTGCACCA AGCTTTGTTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002325734.2
    CDS1..231
    Translation

    Target ORF information:

    RefSeq Version XM_002325698.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa defensin-like family protein (POPTR_0019s00760g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002325698.2

    ORF Insert Sequence:

    1
    61
    121
    181
    ATGGAGATCA AGAGATCCTT TGGGCTTTTC TTCTTGCTCC TCATTGTCTT GGCTTCTCCA 
    GAAGAGGTGG TGGTGCCTAC TGAGGCAAGG GTTTGCCAGT CACAGAGCCA TTATTTTAAA 
    GGCCCATGTG CTAGGGACCA TAACTGTGCA TGGGTGTGCA GGAATGAAGG TTTCTCTGGG 
    GGAAGATGCA AAGGGTTCCG TCGCCGCTGT TTTTGCACCA AGCTTTGTTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7465900 ( XM_024592001.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024447769.1 Populus trichocarpa defensin-like protein 1 (LOC7465900), mRNA.
    Price & Availability↑
    CloneID OPa418740
    Clone ID Related Accession (Same CDS sequence) XM_024592001.1
    Accession Version XM_024592001.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 228bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product defensin-like protein 1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020167874.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    ATGGAGATCA AGAGATCCTT TGGGCTTTTC TTCTTGCTCC TCATTGTCTT GGCTTCTCAA 
    GAGGTGGTGG TGCCTACTGA GGCAAGGGTT TGCCAGTCAC AGAGCCATTA TTTTAAAGGC 
    CCATGTGCTA GGGACCATAA CTGTGCATGG GTGTGCAGGA ATGAAGGTTT CTCTGGGGGA 
    AGATGCAAAG GGTTCCGTCG CCGCTGTTTT TGCACCAAGC TTTGTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024447769.1
    CDS1180..1407
    Translation

    Target ORF information:

    RefSeq Version XM_024592001.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa defensin-like protein 1 (LOC7465900), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024592001.1

    ORF Insert Sequence:

    1
    61
    121
    181
    ATGGAGATCA AGAGATCCTT TGGGCTTTTC TTCTTGCTCC TCATTGTCTT GGCTTCTCAA 
    GAGGTGGTGG TGCCTACTGA GGCAAGGGTT TGCCAGTCAC AGAGCCATTA TTTTAAAGGC 
    CCATGTGCTA GGGACCATAA CTGTGCATGG GTGTGCAGGA ATGAAGGTTT CTCTGGGGGA 
    AGATGCAAAG GGTTCCGTCG CCGCTGTTTT TGCACCAAGC TTTGTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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