ORF » Species Summary » Populus trichocarpa » POPTR_0008s07890g cDNA ORF clone

POPTR_0008s07890g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0008s07890g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0008s07890g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa18642 XM_002311236.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0008s07890g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa435636 XM_024607907.1
Latest version!		 Populus trichocarpa beta-hexosaminidase 3 (LOC7462126), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0008s07890g ( XM_002311236.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002311272.2 Populus trichocarpa hypothetical protein (POPTR_0008s07890g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa18642
    Clone ID Related Accession (Same CDS sequence) XM_002311236.2
    Accession Version XM_002311236.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1587bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008474). On Dec 16, 2013 this sequence version replaced XM_002311236.1. COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGGGTTGA AAAGTGCTTG GTTAGTGGTG GTGTTTATGT TTCTTGGGGT TGCTGTGGCA 
    AAGAATGTGA ATGAGTTGAA TTTATGGCCA ATGCCGAAGT GGGTGAGTAG AGGGCACAGC 
    AGGGTTTACA TGAGTCAAGA TTTTCAGTTA GTTACTGATG GGAGCAAGTA CATTGATGGC 
    TCTGAGATTT TGAAGGATGG CTTTACAAGA ATGCTTGATG TAGTGAAAGT TGCTCATGTT 
    GTTGATGGTG ATCTTTCTAG CGTAGACAAG TCTCTCATCA TTAAAGGAAT TCATGTTCTT 
    ATTTTCTCAC CAGATGACCA GTTACAATAT GGTGTTGCCG AGTCATACAA ACTGCTGGTT 
    CCTTCACCAG AGATGCCAGA TTACGTCCAT CTTGAGGCGC AGACTGTTTA TGGGGCGTTA 
    CATGGGCTTC AGACATTCAG CCAATTGTGT CATTTTAACT TTACAACTAG ACTGATTGAA 
    GTTCACATGG TCCCTTGGAC TATCATTGAT CAACCAAGAT TCTCTTATCG AGGGCTCTTG 
    ATTGATACAT CAAGACACTA TCAGCCAGTG CCAATGATTA AGAAAGTAAT TGATTCTATG 
    GCCTATGCAA AATTGAATGT GTTGCACTGG CACATTGTAG ATACCCAATC TTTCCCTTTG 
    GAGATACCTT CATATCCACA TCTGTGGGAT GGGGCTTATT CAGTTTCAGA GCGGTACACC 
    TTTTCTGATG CTGCTGAAAT TGTGAGGCAA GTGATTCTGC TGCGAGGAAT TAATGTATTA 
    GCTGAACTTG ATGTTCCTGG ACATGCTCTC TCATGGGGGC ATGGCTATCC TTCTCTATGG 
    CCATCAAAAG ACTGTCAGCA GCCACTTGAT GTCAGCAACG AGTTTACATT CAAAGTGATA 
    GATGGGATTC TTTCAGATTT CAGTAAGATC TTTAAATTCA AGTTTGTTCA CTTGGGAGGT 
    GATGAAGTTG ACCCAAGTTG CTGGACAAAA ACTCCCCACA TAACAAAATG GTTAAAAGAG 
    CATAGAATGA ATGGATCTCA AGCTTATCAG TACTTTGTCT TGCGGGCACA GAAAATAGCT 
    TTGTCCCATG GATTTGAAAT TGTTAACTGG GAGGAGACCT TCAATGACTT CAGAAATAAA 
    TTGAGCCGGA AGACAGTGGT GCACAATTGG CTTGGAGGTG GAGTTGCTGA GCAAGTGGTT 
    GCATCTGGGT TGAGGTGCAT TGTGAGCAAC CAGGACAAAT GGTATCTAGA TCACTTGGAT 
    ACTCCTTGGG AAGAGTTCTA TAAGAATGAA CCACTTACAA ATATAACAAA CCCCGAGCAA 
    CAGAGTTTAG TTCTTGGGGG GGAAGTATGC ATGTGGGGAG AAACAGTGGA TGGGTCAGAC 
    ATTGAACAAA CCATATGGCC ACGTGCTGCA GCTGCTGCAG AGCGGCTATG GACACCTTAT 
    GACAAGCTAG CGAAGGATCC AGAAAAAGTT GCTGGAAGGT TAGCACACTT CAGGTGTTTG 
    CTGAATCAAA GAGGGGTTGC CGCAGCTCCT TTAGCTGGAC CAGGCCGAGG AGCACCTATA 
    GAACCAGGTT CTTGTTATGG ACAGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002311272.2
    CDS1..1587
    Translation

    Target ORF information:

    RefSeq Version XM_002311236.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0008s07890g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002311236.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGGGTTGA AAAGTGCTTG GTTAGTGGTG GTGTTTATGT TTCTTGGGGT TGCTGTGGCA 
    AAGAATGTGA ATGAGTTGAA TTTATGGCCA ATGCCGAAGT GGGTGAGTAG AGGGCACAGC 
    AGGGTTTACA TGAGTCAAGA TTTTCAGTTA GTTACTGATG GGAGCAAGTA CATTGATGGC 
    TCTGAGATTT TGAAGGATGG CTTTACAAGA ATGCTTGATG TAGTGAAAGT TGCTCATGTT 
    GTTGATGGTG ATCTTTCTAG CGTAGACAAG TCTCTCATCA TTAAAGGAAT TCATGTTCTT 
    ATTTTCTCAC CAGATGACCA GTTACAATAT GGTGTTGCCG AGTCATACAA ACTGCTGGTT 
    CCTTCACCAG AGATGCCAGA TTACGTCCAT CTTGAGGCGC AGACTGTTTA TGGGGCGTTA 
    CATGGGCTTC AGACATTCAG CCAATTGTGT CATTTTAACT TTACAACTAG ACTGATTGAA 
    GTTCACATGG TCCCTTGGAC TATCATTGAT CAACCAAGAT TCTCTTATCG AGGGCTCTTG 
    ATTGATACAT CAAGACACTA TCAGCCAGTG CCAATGATTA AGAAAGTAAT TGATTCTATG 
    GCCTATGCAA AATTGAATGT GTTGCACTGG CACATTGTAG ATACCCAATC TTTCCCTTTG 
    GAGATACCTT CATATCCACA TCTGTGGGAT GGGGCTTATT CAGTTTCAGA GCGGTACACC 
    TTTTCTGATG CTGCTGAAAT TGTGAGGCAA GTGATTCTGC TGCGAGGAAT TAATGTATTA 
    GCTGAACTTG ATGTTCCTGG ACATGCTCTC TCATGGGGGC ATGGCTATCC TTCTCTATGG 
    CCATCAAAAG ACTGTCAGCA GCCACTTGAT GTCAGCAACG AGTTTACATT CAAAGTGATA 
    GATGGGATTC TTTCAGATTT CAGTAAGATC TTTAAATTCA AGTTTGTTCA CTTGGGAGGT 
    GATGAAGTTG ACCCAAGTTG CTGGACAAAA ACTCCCCACA TAACAAAATG GTTAAAAGAG 
    CATAGAATGA ATGGATCTCA AGCTTATCAG TACTTTGTCT TGCGGGCACA GAAAATAGCT 
    TTGTCCCATG GATTTGAAAT TGTTAACTGG GAGGAGACCT TCAATGACTT CAGAAATAAA 
    TTGAGCCGGA AGACAGTGGT GCACAATTGG CTTGGAGGTG GAGTTGCTGA GCAAGTGGTT 
    GCATCTGGGT TGAGGTGCAT TGTGAGCAAC CAGGACAAAT GGTATCTAGA TCACTTGGAT 
    ACTCCTTGGG AAGAGTTCTA TAAGAATGAA CCACTTACAA ATATAACAAA CCCCGAGCAA 
    CAGAGTTTAG TTCTTGGGGG GGAAGTATGC ATGTGGGGAG AAACAGTGGA TGGGTCAGAC 
    ATTGAACAAA CCATATGGCC ACGTGCTGCA GCTGCTGCAG AGCGGCTATG GACACCTTAT 
    GACAAGCTAG CGAAGGATCC AGAAAAAGTT GCTGGAAGGT TAGCACACTT CAGGTGTTTG 
    CTGAATCAAA GAGGGGTTGC CGCAGCTCCT TTAGCTGGAC CAGGCCGAGG AGCACCTATA 
    GAACCAGGTT CTTGTTATGG ACAGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0008s07890g ( XM_024607907.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024463675.1 Populus trichocarpa beta-hexosaminidase 3 (LOC7462126), mRNA.
    Price & Availability↑
    CloneID OPa435636
    Clone ID Related Accession (Same CDS sequence) XM_024607907.1
    Accession Version XM_024607907.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1584bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product beta-hexosaminidase 3
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037292.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGGGTTGA AAAGTGCTTG GTTAGTGGTG GTGTTTATGT TTCTTGGGGT TGCTGTGGCA 
    AAGAATGTGA ATGAGTTGAA TTTATGGCCA ATGCCGAAGT GGGTGAGTAG AGGGCACAGC 
    AGGGTTTACA TGAGTCAAGA TTTTCAGTTA GTTACTGATG GGAGCAAGTA CATTGATGGC 
    TCTGAGATTT TGAAGGATGG CTTTACAAGA ATGCTTGATG TAGTGAAAGT TGCTCATGTT 
    GTTGATGGTG ATCTTTCTAG CGTAGACAAG TCTCTCATCA TTAAAGGAAT TCATGTTCTT 
    ATTTTCTCAC CAGATGACCA GTTACAATAT GGTGTTGCCG AGTCATACAA ACTGCTGGTT 
    CCTTCACCAG AGATGCCAGA TTACGTCCAT CTTGAGGCGC AGACTGTTTA TGGGGCGTTA 
    CATGGGCTTC AGACATTCAG CCAATTGTGT CATTTTAACT TTACAACTAG ACTGATTGAA 
    GTTCACATGG TCCCTTGGAC TATCATTGAT CAACCAAGAT TCTCTTATCG AGGGCTCTTG 
    ATTGATACAT CAAGACACTA TCAGCCAGTG CCAATGATTA AGAAAGTAAT TGATTCTATG 
    GCCTATGCAA AATTGAATGT GTTGCACTGG CACATTGTAG ATACCCAATC TTTCCCTTTG 
    GAGATACCTT CATATCCACA TCTGTGGGAT GGGGCTTATT CAGTTTCAGA GCGGTACACC 
    TTTTCTGATG CTGCTGAAAT TGTGAGTTAT GCTCAAAGGC GAGGAATTAA TGTATTAGCT 
    GAACTTGATG TTCCTGGACA TGCTCTCTCA TGGGGGCATG GCTATCCTTC TCTATGGCCA 
    TCAAAAGACT GTCAGCAGCC ACTTGATGTC AGCAACGAGT TTACATTCAA AGTGATAGAT 
    GGGATTCTTT CAGATTTCAG TAAGATCTTT AAATTCAAGT TTGTTCACTT GGGAGGTGAT 
    GAAGTTGACC CAAGTTGCTG GACAAAAACT CCCCACATAA CAAAATGGTT AAAAGAGCAT 
    AGAATGAATG GATCTCAAGC TTATCAGTAC TTTGTCTTGC GGGCACAGAA AATAGCTTTG 
    TCCCATGGAT TTGAAATTGT TAACTGGGAG GAGACCTTCA ATGACTTCAG AAATAAATTG 
    AGCCGGAAGA CAGTGGTGCA CAATTGGCTT GGAGGTGGAG TTGCTGAGCA AGTGGTTGCA 
    TCTGGGTTGA GGTGCATTGT GAGCAACCAG GACAAATGGT ATCTAGATCA CTTGGATACT 
    CCTTGGGAAG AGTTCTATAA GAATGAACCA CTTACAAATA TAACAAACCC CGAGCAACAG 
    AGTTTAGTTC TTGGGGGGGA AGTATGCATG TGGGGAGAAA CAGTGGATGG GTCAGACATT 
    GAACAAACCA TATGGCCACG TGCTGCAGCT GCTGCAGAGC GGCTATGGAC ACCTTATGAC 
    AAGCTAGCGA AGGATCCAGA AAAAGTTGCT GGAAGGTTAG CACACTTCAG GTGTTTGCTG 
    AATCAAAGAG GGGTTGCCGC AGCTCCTTTA GCTGGACCAG GCCGAGGAGC ACCTATAGAA 
    CCAGGTTCTT GTTATGGACA GTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024463675.1
    CDS398..1981
    Translation

    Target ORF information:

    RefSeq Version XM_024607907.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa beta-hexosaminidase 3 (LOC7462126), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024607907.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGGGTTGA AAAGTGCTTG GTTAGTGGTG GTGTTTATGT TTCTTGGGGT TGCTGTGGCA 
    AAGAATGTGA ATGAGTTGAA TTTATGGCCA ATGCCGAAGT GGGTGAGTAG AGGGCACAGC 
    AGGGTTTACA TGAGTCAAGA TTTTCAGTTA GTTACTGATG GGAGCAAGTA CATTGATGGC 
    TCTGAGATTT TGAAGGATGG CTTTACAAGA ATGCTTGATG TAGTGAAAGT TGCTCATGTT 
    GTTGATGGTG ATCTTTCTAG CGTAGACAAG TCTCTCATCA TTAAAGGAAT TCATGTTCTT 
    ATTTTCTCAC CAGATGACCA GTTACAATAT GGTGTTGCCG AGTCATACAA ACTGCTGGTT 
    CCTTCACCAG AGATGCCAGA TTACGTCCAT CTTGAGGCGC AGACTGTTTA TGGGGCGTTA 
    CATGGGCTTC AGACATTCAG CCAATTGTGT CATTTTAACT TTACAACTAG ACTGATTGAA 
    GTTCACATGG TCCCTTGGAC TATCATTGAT CAACCAAGAT TCTCTTATCG AGGGCTCTTG 
    ATTGATACAT CAAGACACTA TCAGCCAGTG CCAATGATTA AGAAAGTAAT TGATTCTATG 
    GCCTATGCAA AATTGAATGT GTTGCACTGG CACATTGTAG ATACCCAATC TTTCCCTTTG 
    GAGATACCTT CATATCCACA TCTGTGGGAT GGGGCTTATT CAGTTTCAGA GCGGTACACC 
    TTTTCTGATG CTGCTGAAAT TGTGAGTTAT GCTCAAAGGC GAGGAATTAA TGTATTAGCT 
    GAACTTGATG TTCCTGGACA TGCTCTCTCA TGGGGGCATG GCTATCCTTC TCTATGGCCA 
    TCAAAAGACT GTCAGCAGCC ACTTGATGTC AGCAACGAGT TTACATTCAA AGTGATAGAT 
    GGGATTCTTT CAGATTTCAG TAAGATCTTT AAATTCAAGT TTGTTCACTT GGGAGGTGAT 
    GAAGTTGACC CAAGTTGCTG GACAAAAACT CCCCACATAA CAAAATGGTT AAAAGAGCAT 
    AGAATGAATG GATCTCAAGC TTATCAGTAC TTTGTCTTGC GGGCACAGAA AATAGCTTTG 
    TCCCATGGAT TTGAAATTGT TAACTGGGAG GAGACCTTCA ATGACTTCAG AAATAAATTG 
    AGCCGGAAGA CAGTGGTGCA CAATTGGCTT GGAGGTGGAG TTGCTGAGCA AGTGGTTGCA 
    TCTGGGTTGA GGTGCATTGT GAGCAACCAG GACAAATGGT ATCTAGATCA CTTGGATACT 
    CCTTGGGAAG AGTTCTATAA GAATGAACCA CTTACAAATA TAACAAACCC CGAGCAACAG 
    AGTTTAGTTC TTGGGGGGGA AGTATGCATG TGGGGAGAAA CAGTGGATGG GTCAGACATT 
    GAACAAACCA TATGGCCACG TGCTGCAGCT GCTGCAGAGC GGCTATGGAC ACCTTATGAC 
    AAGCTAGCGA AGGATCCAGA AAAAGTTGCT GGAAGGTTAG CACACTTCAG GTGTTTGCTG 
    AATCAAAGAG GGGTTGCCGC AGCTCCTTTA GCTGGACCAG GCCGAGGAGC ACCTATAGAA 
    CCAGGTTCTT GTTATGGACA GTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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