ORF » Species Summary » Populus trichocarpa » LOC7458487 cDNA ORF clone

LOC7458487 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7458487 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7458487 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa14300 XM_002307831.2
Latest version!		 Populus trichocarpa Proteasome subunit alpha type 4 family protein (POPTR_0006s01040g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa432752 XM_002307831.3
Latest version!		 Populus trichocarpa proteasome subunit alpha type-4 (LOC7458487), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7458487 ( XM_002307831.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002307867.1 Populus trichocarpa Proteasome subunit alpha type 4 family protein (POPTR_0006s01040g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa14300
    Clone ID Related Accession (Same CDS sequence) XM_002307831.2
    Accession Version XM_002307831.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 753bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product Proteasome subunit alpha type 4 family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008472). On Dec 16, 2013 this sequence version replaced XM_002307831.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGTCTAGGA GATATGATAG CCGCACAACA ATCTTCTCCC CTGAAGGACG CCTGTATCAA 
    GTTGAGTATG CTATGGAGGC CATTGGAAAT GCTGGTTCTG CAATAGGAAT ATTATCCAAA 
    GATGGGGTTG TCTTGGTTGG AGAAAAGAAG GTTACATCGA AGCTATTGCA AACCTCAACT 
    TCCACTGAGA AGATGTACAA GATTGATGAT CATGTTGCTT GTGCTGTGGC TGGAATTATG 
    TCTGATGCCA ACATCCTCAT CAACACTGCC AGGATCCAAG CACAACGCTA CACCTTTGCA 
    TACCAAGAGC CAATGCCTGT AGAGCAACTA GTTCAATCCC TTTGTGATAC TAAGCAAGGG 
    TACACACAGT TTGGAGGTCT TCGGCCCTTT GGTGTGTCGT TTCTGTTTGC AGGATGGGAC 
    AAAAATTATG GCTTCCAACT TTACATGAGC GATCCTAGTG GAAATTATTC TGGTTGGAAA 
    GCTGGAGCAA TTGGGGCAAA CAACCAGGCT GCACAATCCA TGCTAAAGCA GGATTACAAG 
    GATGAAATCA CAAGGGAAGA AGCTGTCCAG CTTGCTTTGA AGGTGCTCAG CAAAACCATG 
    GATAGTACAA GCCTTACTTC AGAGAAGCTC GAACTGGCTG AGGTCTTCCT TTCTCCTTCT 
    GGGAATGTGA AATACCAAGT CTGCTCACCG GATGTTCTAA GCAAGCTGTT GGTGAAGTTT 
    GGAGTTACCC AACCTGCTGC TGAGACTTCC TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002307867.1
    CDS135..887
    Translation

    Target ORF information:

    RefSeq Version XM_002307831.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa Proteasome subunit alpha type 4 family protein (POPTR_0006s01040g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002307831.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGTCTAGGA GATATGATAG CCGCACAACA ATCTTCTCCC CTGAAGGACG CCTGTATCAA 
    GTTGAGTATG CTATGGAGGC CATTGGAAAT GCTGGTTCTG CAATAGGAAT ATTATCCAAA 
    GATGGGGTTG TCTTGGTTGG AGAAAAGAAG GTTACATCGA AGCTATTGCA AACCTCAACT 
    TCCACTGAGA AGATGTACAA GATTGATGAT CATGTTGCTT GTGCTGTGGC TGGAATTATG 
    TCTGATGCCA ACATCCTCAT CAACACTGCC AGGATCCAAG CACAACGCTA CACCTTTGCA 
    TACCAAGAGC CAATGCCTGT AGAGCAACTA GTTCAATCCC TTTGTGATAC TAAGCAAGGG 
    TACACACAGT TTGGAGGTCT TCGGCCCTTT GGTGTGTCGT TTCTGTTTGC AGGATGGGAC 
    AAAAATTATG GCTTCCAACT TTACATGAGC GATCCTAGTG GAAATTATTC TGGTTGGAAA 
    GCTGGAGCAA TTGGGGCAAA CAACCAGGCT GCACAATCCA TGCTAAAGCA GGATTACAAG 
    GATGAAATCA CAAGGGAAGA AGCTGTCCAG CTTGCTTTGA AGGTGCTCAG CAAAACCATG 
    GATAGTACAA GCCTTACTTC AGAGAAGCTC GAACTGGCTG AGGTCTTCCT TTCTCCTTCT 
    GGGAATGTGA AATACCAAGT CTGCTCACCG GATGTTCTAA GCAAGCTGTT GGTGAAGTTT 
    GGAGTTACCC AACCTGCTGC TGAGACTTCC TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7458487 ( XM_002307831.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002307867.1 Populus trichocarpa proteasome subunit alpha type-4 (LOC7458487), mRNA.
    Price & Availability↑
    CloneID OPa432752
    Clone ID Related Accession (Same CDS sequence) XM_002307831.3
    Accession Version XM_002307831.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 753bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product proteasome subunit alpha type-4
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037290.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002307831.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGTCTAGGA GATATGATAG CCGCACAACA ATCTTCTCCC CTGAAGGACG CCTGTATCAA 
    GTTGAGTATG CTATGGAGGC CATTGGAAAT GCTGGTTCTG CAATAGGAAT ATTATCCAAA 
    GATGGGGTTG TCTTGGTTGG AGAAAAGAAG GTTACATCCA AGCTATTGCA AACCTCAACT 
    TCCACTGAGA AGATGTACAA GATTGATGAT CATGTTGCTT GTGCTGTGGC TGGAATTATG 
    TCTGACGCCA ACATCCTCAT CAACACTGCC AGGATCCAAG CACAACGCTA CACCTTTGCA 
    TACCAAGAGC CAATGCCTGT AGAGCAACTA GTTCAATCCC TTTGTGATAC TAAGCAAGGG 
    TACACACAGT TTGGAGGTCT TCGGCCCTTT GGCGTGTCGT TTCTGTTTGC AGGATGGGAC 
    AAAAATTATG GCTTCCAACT TTACATGAGC GATCCTAGTG GAAATTATTC TGGTTGGAAA 
    GCTGGAGCAA TTGGGGCAAA CAACCAGGCT GCACAATCCA TGCTAAAGCA GGATTACAAG 
    GATGAAATCA CAAGGGAAGA GGCTGTCCAG CTTGCTTTGA AGGTGCTCAG CAAAACCATG 
    GATAGCACAA GCCTTACTTC AGAGAAGCTC GAACTGGCTG AGGTCTTCCT TTCTCCTTCT 
    GGGAATGTGA AATACCAAGT CTGCTCACCC GATGTTCTAA GCAAGCTGTT GGTGAAGTTT 
    GGAGTTACCC AACCTGCTGC TGAGACTTCC TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002307867.1
    CDS164..916
    Translation

    Target ORF information:

    RefSeq Version XM_002307831.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa proteasome subunit alpha type-4 (LOC7458487), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002307831.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGTCTAGGA GATATGATAG CCGCACAACA ATCTTCTCCC CTGAAGGACG CCTGTATCAA 
    GTTGAGTATG CTATGGAGGC CATTGGAAAT GCTGGTTCTG CAATAGGAAT ATTATCCAAA 
    GATGGGGTTG TCTTGGTTGG AGAAAAGAAG GTTACATCCA AGCTATTGCA AACCTCAACT 
    TCCACTGAGA AGATGTACAA GATTGATGAT CATGTTGCTT GTGCTGTGGC TGGAATTATG 
    TCTGACGCCA ACATCCTCAT CAACACTGCC AGGATCCAAG CACAACGCTA CACCTTTGCA 
    TACCAAGAGC CAATGCCTGT AGAGCAACTA GTTCAATCCC TTTGTGATAC TAAGCAAGGG 
    TACACACAGT TTGGAGGTCT TCGGCCCTTT GGCGTGTCGT TTCTGTTTGC AGGATGGGAC 
    AAAAATTATG GCTTCCAACT TTACATGAGC GATCCTAGTG GAAATTATTC TGGTTGGAAA 
    GCTGGAGCAA TTGGGGCAAA CAACCAGGCT GCACAATCCA TGCTAAAGCA GGATTACAAG 
    GATGAAATCA CAAGGGAAGA GGCTGTCCAG CTTGCTTTGA AGGTGCTCAG CAAAACCATG 
    GATAGCACAA GCCTTACTTC AGAGAAGCTC GAACTGGCTG AGGTCTTCCT TTCTCCTTCT 
    GGGAATGTGA AATACCAAGT CTGCTCACCC GATGTTCTAA GCAAGCTGTT GGTGAAGTTT 
    GGAGTTACCC AACCTGCTGC TGAGACTTCC TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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