ORF » Species Summary » Populus trichocarpa » POPTR_0258s00200g cDNA ORF clone

POPTR_0258s00200g cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following POPTR_0258s00200g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0258s00200g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa429380 XM_024600854.1
Latest version!		 Populus trichocarpa disease resistance protein RPM1 (LOC18109961), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $475.30
$679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0258s00200g ( XM_024600854.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024456622.1 Populus trichocarpa disease resistance protein RPM1 (LOC18109961), mRNA.
    Price & Availability↑
    CloneID OPa429380
    Clone ID Related Accession (Same CDS sequence) XM_024600854.1
    Accession Version XM_024600854.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2802bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product disease resistance protein RPM1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037289.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    ATGGCAGAGT CGGCGGTGAG CCTTGTTCTT GATAAATTGC TTCCATTGCT AACACAAGAA 
    GTGAAACTAT TGAAAGGCGT CCATGATGAA TTGGTTGGTG TCAAAGATGA ATTGGAAGTC 
    ATTCGTGCTT TCCTGAAAGA TGCAGATTCA AAGGCTGAAA AAGAAGGCAT CGGTGAGGGT 
    GTGAAAGTAC TGGTAAACCA AATAAGAGAA GAAGCTTATC GCATTGAAGA TGTCATTGAT 
    GATTACGTGT TGCATGTGGC AAGACGTCCT GATTATCGAC GTCAACTCCT TTGTAGAATT 
    GCTTCTTTGA TTAAAACATG CATTTCACGT CTTGAGATAG CATCAGAGAT TAAAGATATC 
    AAATCATCAC TTCTAGATAT CAAGAACAGA AGTCAAACAT TCCAATTCAT TTCTTCAAAT 
    CAGGGAGCAT CAAGCAGCAG CAATGCAGGA AGAGGGTTAA TGGATCACCC TCGACTGAGT 
    TCTCTTTTCA TTGAAGAAGC TGAGCTTGTT GGGATTGAAT CTCGGAAAGA TGAATTGATA 
    AGCTACTTCG TAAGTGGAGT TTCTCAAAGG AAAGTGATCG CAGTGTTTGG AATGGGGGGT 
    GTGGGAAAAA CCACACTGGC CAAGAAAGTA TACGACAACC ACAGGGTGAT AGAGCACTTC 
    CGTTACCATG CTTGGATCAC CGTGTCTCAA TCATATGATA AGACGGAGCT ACTAAGGAGT 
    ATGCTGAAGG GATTCTATAA AGCGATAGAT GAGCCTTTTC CTGATAAAAT TGTTAAAATG 
    GACAAGGATG AGGAGTTGAT TGAGGAGATT AGAGAAAAGT TACGACAAGA ACGATATTTG 
    GTTGTATTTG ATGATGTATG GGAAATTGGC TTTTGGGGAA ACATGGAGCT GGCGTTGTTA 
    GATCATGATA ATGGCAGTAG AATATTGGCT ACAACAAGAA AAGAGGAGGC TGCTAGATTT 
    TGTAGAGGAT CTTCATCGGT TCATGTCCAT CGTATGGATC CTTTACCTCA AAAAGAGGCA 
    CGGGAACTCT TCTGTAAAAA AGCATTCAGG TTTCAATCTC AAGGGCAATG TCCAAAAGAT 
    CTGGATGAAT TGTCACACGA AATTGTTAGA AGATGTGGAG GATTGCCACT GGCAATTGTG 
    GCTGTTAGTG GACTTCTAGC AACCAAAGAG AAGAGCGTTC AAGAATGGCA AAAAGTTCTC 
    AGTGGTCTTG GTGGTCCTGC AATGACAAGT GATCCATACG TTAATAACGT CACTAGCATT 
    CTATCTCTCA GCTATAGTGA TCTCCCTTGC CGCCTCAAAT CTTGTTTCTT ATATTTTGGC 
    ATGTTTCCTG AGGATTTTTC CATTAAACGT CGAAGAATAA TTCAATTATG GGTGGCTGAT 
    GGTTTTGTAC AAGAAAAACC AGACATGACA CCAGAGGAGG TTGGAGAAGA ATACTTCATT 
    GAACTCATTC GTCGAAGTTT GGTTCAAGTG GATGATCTTA GTCTTAAAGG AGTTCCCAAA 
    ACATGTCGTG TTCATGATAT GGTCCGTGAA GTCATTCTTT CCAAGTCAGA GGAACTGAGT 
    CTCTGCCATG TTTCCAGCAG TTGCTTGACT TTTGAAGGCA TAGCACGACA TCTCTCCATA 
    AGCAACAGAG GAAGCAACCC TCCAAAGAGT AGCACCAGGT CTCAAACTCG CTCTATTATG 
    GTCTTTGACA AAGAAATGCT GCAGAAGGCT ACAGTTCCAG TAATATTTGC AAAATTCAAG 
    CTTTTGACTT CATTAGATTT TGAAGACTGT CCTATAGATC ACCTTCCCAA AGAACTTGGA 
    AATTTGCTAC ATCTAAGGTA TTTGAACTTA AGAAATACCG ATGTAAAAGA ACTTCCAAGA 
    TCAATAGGAA AGCTCCATAA CCTGGAGTCC TTGGATTTGA GATTCTCTTT GGTGGAAGAG 
    CTGCCAGTTG AGATCAGCGA TTTCCCTAAA TTGCGACATC TTTTGGCTCA TGGTGGATAC 
    GCTACTGGAT TGAAGATAAA AGGCAGCTTT AAGCATTTGG AGTTCGTACA AACATTGTTT 
    ACAATTAAAG TGGATGATGA TGAGAGCATG CTCAATGACG GCCTACAAGT GTTGACGAAA 
    ACGAGGAAAT TTGGGATCTG CAATTTGAAA AGAGAACAAG GAAGGTATCT ATGCACTGTA 
    TTAGAGAAGA TGACTCACCT GCGGTCGCTA CTTGTTTATT CAGTCAATCA CCGGGTTGAA 
    ATTCTTGATT TGGAATTAGA ATTTTCCCCT CCAATTCAGC TGCAGAGTCT CTGGCTTGGG 
    GGTCAATTAG ATAGGTTGCC GAATTGGATT TCCAAGCTGC ACAATCTATC TAAACTGATA 
    TTGAGTTTTT CAAGCTTGAT GGATGATTCC GTTGAAGTCC TTCAAGCTCT GCCCAATCTA 
    AAATCTCTTG TACTCTTTCG GGCATACAAA GGAAAGAGGA TGCATTTTGA AGGAGGAGGG 
    TTTCAGAAAC TCAAGTCTCT GTATCTTGCA GGCTTGAGTA ATTTGAATGA AATGTTAATA 
    GACGAAGGAG CATTGCCACT TCTTGAAAGG CTGGAAATGG GACCTTGCCC AATGCTGAAG 
    GAGGTGCCCT CTGGACTTCA AAACTTGAGA TATCTCGAGG TTTTGTTGTT CGCATGGATG 
    ACAAAGGAAT TCAATCAAAG ATGGTCACAG CAAGAATCCA AGATATCGAG GCATGTACGG 
    ATTCATCGAT CTGATGGTAC TTATGATAAA GATGATAAAG CATCGTTTGA AGCATGGGAG 
    GAGCGAAAGT TTAGAGCATG GGAGAAGCGA AAGTATGGAT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024456622.1
    CDS290..3091
    Translation

    Target ORF information:

    RefSeq Version XM_024600854.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa disease resistance protein RPM1 (LOC18109961), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024600854.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    ATGGCAGAGT CGGCGGTGAG CCTTGTTCTT GATAAATTGC TTCCATTGCT AACACAAGAA 
    GTGAAACTAT TGAAAGGCGT CCATGATGAA TTGGTTGGTG TCAAAGATGA ATTGGAAGTC 
    ATTCGTGCTT TCCTGAAAGA TGCAGATTCA AAGGCTGAAA AAGAAGGCAT CGGTGAGGGT 
    GTGAAAGTAC TGGTAAACCA AATAAGAGAA GAAGCTTATC GCATTGAAGA TGTCATTGAT 
    GATTACGTGT TGCATGTGGC AAGACGTCCT GATTATCGAC GTCAACTCCT TTGTAGAATT 
    GCTTCTTTGA TTAAAACATG CATTTCACGT CTTGAGATAG CATCAGAGAT TAAAGATATC 
    AAATCATCAC TTCTAGATAT CAAGAACAGA AGTCAAACAT TCCAATTCAT TTCTTCAAAT 
    CAGGGAGCAT CAAGCAGCAG CAATGCAGGA AGAGGGTTAA TGGATCACCC TCGACTGAGT 
    TCTCTTTTCA TTGAAGAAGC TGAGCTTGTT GGGATTGAAT CTCGGAAAGA TGAATTGATA 
    AGCTACTTCG TAAGTGGAGT TTCTCAAAGG AAAGTGATCG CAGTGTTTGG AATGGGGGGT 
    GTGGGAAAAA CCACACTGGC CAAGAAAGTA TACGACAACC ACAGGGTGAT AGAGCACTTC 
    CGTTACCATG CTTGGATCAC CGTGTCTCAA TCATATGATA AGACGGAGCT ACTAAGGAGT 
    ATGCTGAAGG GATTCTATAA AGCGATAGAT GAGCCTTTTC CTGATAAAAT TGTTAAAATG 
    GACAAGGATG AGGAGTTGAT TGAGGAGATT AGAGAAAAGT TACGACAAGA ACGATATTTG 
    GTTGTATTTG ATGATGTATG GGAAATTGGC TTTTGGGGAA ACATGGAGCT GGCGTTGTTA 
    GATCATGATA ATGGCAGTAG AATATTGGCT ACAACAAGAA AAGAGGAGGC TGCTAGATTT 
    TGTAGAGGAT CTTCATCGGT TCATGTCCAT CGTATGGATC CTTTACCTCA AAAAGAGGCA 
    CGGGAACTCT TCTGTAAAAA AGCATTCAGG TTTCAATCTC AAGGGCAATG TCCAAAAGAT 
    CTGGATGAAT TGTCACACGA AATTGTTAGA AGATGTGGAG GATTGCCACT GGCAATTGTG 
    GCTGTTAGTG GACTTCTAGC AACCAAAGAG AAGAGCGTTC AAGAATGGCA AAAAGTTCTC 
    AGTGGTCTTG GTGGTCCTGC AATGACAAGT GATCCATACG TTAATAACGT CACTAGCATT 
    CTATCTCTCA GCTATAGTGA TCTCCCTTGC CGCCTCAAAT CTTGTTTCTT ATATTTTGGC 
    ATGTTTCCTG AGGATTTTTC CATTAAACGT CGAAGAATAA TTCAATTATG GGTGGCTGAT 
    GGTTTTGTAC AAGAAAAACC AGACATGACA CCAGAGGAGG TTGGAGAAGA ATACTTCATT 
    GAACTCATTC GTCGAAGTTT GGTTCAAGTG GATGATCTTA GTCTTAAAGG AGTTCCCAAA 
    ACATGTCGTG TTCATGATAT GGTCCGTGAA GTCATTCTTT CCAAGTCAGA GGAACTGAGT 
    CTCTGCCATG TTTCCAGCAG TTGCTTGACT TTTGAAGGCA TAGCACGACA TCTCTCCATA 
    AGCAACAGAG GAAGCAACCC TCCAAAGAGT AGCACCAGGT CTCAAACTCG CTCTATTATG 
    GTCTTTGACA AAGAAATGCT GCAGAAGGCT ACAGTTCCAG TAATATTTGC AAAATTCAAG 
    CTTTTGACTT CATTAGATTT TGAAGACTGT CCTATAGATC ACCTTCCCAA AGAACTTGGA 
    AATTTGCTAC ATCTAAGGTA TTTGAACTTA AGAAATACCG ATGTAAAAGA ACTTCCAAGA 
    TCAATAGGAA AGCTCCATAA CCTGGAGTCC TTGGATTTGA GATTCTCTTT GGTGGAAGAG 
    CTGCCAGTTG AGATCAGCGA TTTCCCTAAA TTGCGACATC TTTTGGCTCA TGGTGGATAC 
    GCTACTGGAT TGAAGATAAA AGGCAGCTTT AAGCATTTGG AGTTCGTACA AACATTGTTT 
    ACAATTAAAG TGGATGATGA TGAGAGCATG CTCAATGACG GCCTACAAGT GTTGACGAAA 
    ACGAGGAAAT TTGGGATCTG CAATTTGAAA AGAGAACAAG GAAGGTATCT ATGCACTGTA 
    TTAGAGAAGA TGACTCACCT GCGGTCGCTA CTTGTTTATT CAGTCAATCA CCGGGTTGAA 
    ATTCTTGATT TGGAATTAGA ATTTTCCCCT CCAATTCAGC TGCAGAGTCT CTGGCTTGGG 
    GGTCAATTAG ATAGGTTGCC GAATTGGATT TCCAAGCTGC ACAATCTATC TAAACTGATA 
    TTGAGTTTTT CAAGCTTGAT GGATGATTCC GTTGAAGTCC TTCAAGCTCT GCCCAATCTA 
    AAATCTCTTG TACTCTTTCG GGCATACAAA GGAAAGAGGA TGCATTTTGA AGGAGGAGGG 
    TTTCAGAAAC TCAAGTCTCT GTATCTTGCA GGCTTGAGTA ATTTGAATGA AATGTTAATA 
    GACGAAGGAG CATTGCCACT TCTTGAAAGG CTGGAAATGG GACCTTGCCC AATGCTGAAG 
    GAGGTGCCCT CTGGACTTCA AAACTTGAGA TATCTCGAGG TTTTGTTGTT CGCATGGATG 
    ACAAAGGAAT TCAATCAAAG ATGGTCACAG CAAGAATCCA AGATATCGAG GCATGTACGG 
    ATTCATCGAT CTGATGGTAC TTATGATAAA GATGATAAAG CATCGTTTGA AGCATGGGAG 
    GAGCGAAAGT TTAGAGCATG GGAGAAGCGA AAGTATGGAT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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