ORF » Species Summary » Populus trichocarpa » LOC18099263 cDNA ORF clone

LOC18099263 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18099263 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18099263 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa13734 XM_006383118.1
Latest version!		 Populus trichocarpa cytidylyltransferase domain-containing family protein (POPTR_0005s12320g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
OPa429867 XM_024601384.1
Latest version!		 Populus trichocarpa syntaxin-112 (LOC18099263), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18099263 ( XM_006383118.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006383180.1 Populus trichocarpa cytidylyltransferase domain-containing family protein (POPTR_0005s12320g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa13734
    Clone ID Related Accession (Same CDS sequence) XM_006383118.1
    Accession Version XM_006383118.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 537bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product cytidylyltransferase domain-containing family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008471). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGGTGACGG TAGAGGAATC GGTGGTTAAC ACTAAACTTT CACCACCAAA TTCTTATTCT 
    GCGGTGGTTC TTGGTGGCAC TTTTGACCGG TTACACGACG GCCACCGCCT CTTCCTCAAG 
    GCCGCAGCAG AATTGGCGAA GGATCGTATT GTGATTGGAG TCTGTGATGG TCCTATGTTG 
    AAGAATAAGC AGTTTGCTGA ATTAATACAA CCCATTGAGG AAAGGATGCA CAATGTTGAA 
    AACTATATCA AGTCTTTTAA GCCGGAACTT GTTGTGCAAA CTGAAACTAT TACAGATCCC 
    TACGGGCCTT CAATCGTCGA TGAAAATTTG GGGGCTATTG TTGTTAGCAA GGAGACAGTG 
    GCAGGTGGGT TGTCCGTTAA TAAGAAGAGA GCTGACAGAG GCCTCTCACA ACTAAAGATT 
    GAAGTTGTAG ACTTGGTTCC TGAAGAATCT GGTGGAGCTA ATAAGCTCAG TTCTACGACA 
    TTAAGGAGAC TTGAGTCCGA GAAGGCCAAA GAACAACAAA CACCAACAGA GTCATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006383180.1
    CDS109..645
    Translation

    Target ORF information:

    RefSeq Version XM_006383118.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa cytidylyltransferase domain-containing family protein (POPTR_0005s12320g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006383118.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGGTGACGG TAGAGGAATC GGTGGTTAAC ACTAAACTTT CACCACCAAA TTCTTATTCT 
    GCGGTGGTTC TTGGTGGCAC TTTTGACCGG TTACACGACG GCCACCGCCT CTTCCTCAAG 
    GCCGCAGCAG AATTGGCGAA GGATCGTATT GTGATTGGAG TCTGTGATGG TCCTATGTTG 
    AAGAATAAGC AGTTTGCTGA ATTAATACAA CCCATTGAGG AAAGGATGCA CAATGTTGAA 
    AACTATATCA AGTCTTTTAA GCCGGAACTT GTTGTGCAAA CTGAAACTAT TACAGATCCC 
    TACGGGCCTT CAATCGTCGA TGAAAATTTG GGGGCTATTG TTGTTAGCAA GGAGACAGTG 
    GCAGGTGGGT TGTCCGTTAA TAAGAAGAGA GCTGACAGAG GCCTCTCACA ACTAAAGATT 
    GAAGTTGTAG ACTTGGTTCC TGAAGAATCT GGTGGAGCTA ATAAGCTCAG TTCTACGACA 
    TTAAGGAGAC TTGAGTCCGA GAAGGCCAAA GAACAACAAA CACCAACAGA GTCATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18099263 ( XM_024601384.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024457152.1 Populus trichocarpa syntaxin-112 (LOC18099263), mRNA.
    Price & Availability↑
    CloneID OPa429867
    Clone ID Related Accession (Same CDS sequence) XM_024601384.1
    Accession Version XM_024601384.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1533bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product syntaxin-112
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037289.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 3% of CDS bases ##RefSeq-Attributes-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGTGACGG TAGAGGAATC GGTGGTTAAC ACTAAACTTT CACCACCAAA TTCTTATTCT 
    GCGGTGGTTC TTGGTGGCAC TTTTGACCGG TTACACGACG GCCACCGCCT CTTCCTCAAG 
    GCCGCAGCAG AATTGGCGAA GGATCGTATT GTGATTGGAG TCTGTGATGG TCCTATGTTG 
    AAGAATAAGC AGTTTGCTGA ATTAATACAA CCCATTGAGG AAAGGATGCA CAATGTTGAA 
    AACTATATCA AGTCTTTTAA GCCGGAACTT GTTGTGCAAA CTGAAACTAT TACAGATCCC 
    TACGGGCCTT CAATCGTCGA TGAAAATTTG GGGGCTATTG TTGTTAGCAA GGAGACAGTG 
    GCAGGTGGGT TGTCCGTTAA TAAGAAGAGA GCTGACAGAG GCCTCTCACA ACTAAAGATT 
    GAAGTTGTAG ACTTGGTTCC TGAAGAATCT GGTGGAGCTA ATAAGCTCAG TTCTACGACA 
    TTAAGGAGAC TTGAGTCCGA GAAGGCCAAA GAACAACAAA CACCAACAGA GTCATACTTC 
    AGTAACCTTG AAAGTAGACA TTGCATCTCT AGTGGCAAGA TGATTGATGA GAATGGTGAC 
    ATTTCACGAC CACAAGGTGG GTTTTGCAAA ATTATTGCGA AGATGAATGA TCTAATGACA 
    AGATCGTTCT TAAGTTATGT GGAACTAAAG AAACAAGCCC AAAAGGACCT TCAAGTTGAA 
    CTCGACATTG AATCAGGCCA ACCCAACCTC TCTCAGTTCT TCCATGAAGT CAACGGAATC 
    AAGACCGAAA TGGAAGATAT TACCAATCTC TTGTTTGATC TTCAAAACCT TAATGAAGAG 
    TCAAAGTCCA CTCACAGTGC CAAAGTTCTT CGTGGCTTAA GAGACCGAAT GGAATCAGAC 
    ATTGTTGCAG TTCTTAGAAA GGCCATGATT GTGAAGGCAA GACTGGAATC ACTTGACAGA 
    TCCAATATAT CCAATCGCAG AGTATCAGAA TTGTATAAAG AAGGGAGTCC TATTGATAGG 
    ACAAGGATAT CAGTCACCAA TGGCTCGAGA GTTAAGCTTA GGGAAATTAT GAATGAATTT 
    CACATCCTGA GACAGAAGAT TTTATCAGAT TACAAAAACG ATCTGAAAAG AAGATACTAC 
    ACTGCGACTG GAGAGGAACC AAGTGAAGAA GAGATTGAAA ATATGATTTC AGGAGGTGGG 
    GGAGTTCAGA TGTTTGAAGG GAAAGGAGTG ATGGACTTGA AGAATAAAGA GAGGCATGAG 
    GTTGTGATGG AAATACAGAG AAGCTTGAAA AGGCTGCATC AGATGTTTCT TGATATGGTT 
    GTTCTTATTG AAACACAGGG AGAGAAGATG GATGACATTG AAGAGAATGT GACCAATGCA 
    GGTAATTTTT TAAGTGGTGG AACAAACAGT CTTTACCATG CAAATCAGAT GAAGAAGAAG 
    AGGAAGACAT GGTTTTTATG GGTTTTTGCT GTGATGTTGA TCATAATTTT TGTTTGCATT 
    ATATCAGAGA CAGCATGGAA GGGAATTATT TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024457152.1
    CDS110..1642
    Translation

    Target ORF information:

    RefSeq Version XM_024601384.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa syntaxin-112 (LOC18099263), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024601384.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGTGACGG TAGAGGAATC GGTGGTTAAC ACTAAACTTT CACCACCAAA TTCTTATTCT 
    GCGGTGGTTC TTGGTGGCAC TTTTGACCGG TTACACGACG GCCACCGCCT CTTCCTCAAG 
    GCCGCAGCAG AATTGGCGAA GGATCGTATT GTGATTGGAG TCTGTGATGG TCCTATGTTG 
    AAGAATAAGC AGTTTGCTGA ATTAATACAA CCCATTGAGG AAAGGATGCA CAATGTTGAA 
    AACTATATCA AGTCTTTTAA GCCGGAACTT GTTGTGCAAA CTGAAACTAT TACAGATCCC 
    TACGGGCCTT CAATCGTCGA TGAAAATTTG GGGGCTATTG TTGTTAGCAA GGAGACAGTG 
    GCAGGTGGGT TGTCCGTTAA TAAGAAGAGA GCTGACAGAG GCCTCTCACA ACTAAAGATT 
    GAAGTTGTAG ACTTGGTTCC TGAAGAATCT GGTGGAGCTA ATAAGCTCAG TTCTACGACA 
    TTAAGGAGAC TTGAGTCCGA GAAGGCCAAA GAACAACAAA CACCAACAGA GTCATACTTC 
    AGTAACCTTG AAAGTAGACA TTGCATCTCT AGTGGCAAGA TGATTGATGA GAATGGTGAC 
    ATTTCACGAC CACAAGGTGG GTTTTGCAAA ATTATTGCGA AGATGAATGA TCTAATGACA 
    AGATCGTTCT TAAGTTATGT GGAACTAAAG AAACAAGCCC AAAAGGACCT TCAAGTTGAA 
    CTCGACATTG AATCAGGCCA ACCCAACCTC TCTCAGTTCT TCCATGAAGT CAACGGAATC 
    AAGACCGAAA TGGAAGATAT TACCAATCTC TTGTTTGATC TTCAAAACCT TAATGAAGAG 
    TCAAAGTCCA CTCACAGTGC CAAAGTTCTT CGTGGCTTAA GAGACCGAAT GGAATCAGAC 
    ATTGTTGCAG TTCTTAGAAA GGCCATGATT GTGAAGGCAA GACTGGAATC ACTTGACAGA 
    TCCAATATAT CCAATCGCAG AGTATCAGAA TTGTATAAAG AAGGGAGTCC TATTGATAGG 
    ACAAGGATAT CAGTCACCAA TGGCTCGAGA GTTAAGCTTA GGGAAATTAT GAATGAATTT 
    CACATCCTGA GACAGAAGAT TTTATCAGAT TACAAAAACG ATCTGAAAAG AAGATACTAC 
    ACTGCGACTG GAGAGGAACC AAGTGAAGAA GAGATTGAAA ATATGATTTC AGGAGGTGGG 
    GGAGTTCAGA TGTTTGAAGG GAAAGGAGTG ATGGACTTGA AGAATAAAGA GAGGCATGAG 
    GTTGTGATGG AAATACAGAG AAGCTTGAAA AGGCTGCATC AGATGTTTCT TGATATGGTT 
    GTTCTTATTG AAACACAGGG AGAGAAGATG GATGACATTG AAGAGAATGT GACCAATGCA 
    GGTAATTTTT TAAGTGGTGG AACAAACAGT CTTTACCATG CAAATCAGAT GAAGAAGAAG 
    AGGAAGACAT GGTTTTTATG GGTTTTTGCT GTGATGTTGA TCATAATTTT TGTTTGCATT 
    ATATCAGAGA CAGCATGGAA GGGAATTATT TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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