ORF » Species Summary » Populus trichocarpa » POPTR_0005s02810g cDNA ORF clone

POPTR_0005s02810g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0005s02810g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0005s02810g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa13234 XM_006382446.2
Latest version!		 Populus trichocarpa shikimate O-hydroxycinnamoyltransferase (LOC18098695), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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OPa13234 XM_006382446.1 Populus trichocarpa hypothetical protein (POPTR_0005s02810g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0005s02810g ( XM_006382446.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006382508.1 Populus trichocarpa shikimate O-hydroxycinnamoyltransferase (LOC18098695), mRNA.
    Price & Availability↑
    CloneID OPa13234
    Clone ID Related Accession (Same CDS sequence) XM_006382446.2 , XM_006382446.1
    Accession Version XM_006382446.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1332bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product shikimate O-hydroxycinnamoyltransferase
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037289.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006382446.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGTAAGAG TTGAAATTCG AACAAAACAG TCAACTATTG TGCGACCTGC CGAAGACACG 
    CCAGAAAAAA GCCTATGGAG CTCAAATCTG GACCTCTTGG TGCCAATGGT ACACATCCCA 
    ACAATATACT TCTACAAGCC AGTTAATGGT TCTTCCAATT TTTTTGACCC TCAAGTGCTC 
    AAGGAGGCTC TGAGCAAGGC TCTTGTGCCA TTCCACCATA TGGCAGGGAG ATTAGAGAAG 
    GATGAAAATG GTAGGATGTC GATATTGTGT AACGCCAAAG GGGTTTTATT TGTCGAGGCT 
    GAAACAAGCT CTACCATTGA TGAAGTGGGT GATTTTACTC CCCACTCTGA GATGCTGCAG 
    TTCATTCCAG AAGTCGATCG TTCAAGCATA TTTTCCTATC CTCTACTACT CGCACAGGCA 
    ACCTTCTTCA AATGTGGAGG AGTATGTCTT GGAGTTGGCT TACACCATAT CTTGGGAGAT 
    GGAACTTCTG CAATCCATTT TATCAACTCA TGGTCTGAAA TAGCAAGAGG ACTATCTGTT 
    ACCACCCCAC CGTTCATTGA CCGTACCTTG CTTGATGCTC GAGTTCCTCC TGTCCCTGCT 
    ATGCATCACG TAGAATACGA CCCCCCTCCT ACCTTGAACA CCCATAACTC CGGTGACCAA 
    ACCCTAGAAA TCCAATCAAA TCCGAAACCC ACTTGTGCAA AAATCCTCAC CATCACATTT 
    GATCAACTCC GGACCCTAAA AAACAAGTCT AGAAAAGGCG TTGTTGATGG CACTATCAAC 
    TATAGCACCT TTGAAACCCT AGCAGCACAT ATTTGGCAAT GCACCTGCAA GGCACGTGGA 
    ATCTCGAACG ACCAAGCAAC AAAATTACAC ATTCCAACAG ATGGGCGATC TAGATTGAAC 
    CCACCATTGC CAGCTGGATA CTGTGGCAAT GCTCTTTTCA CAACAGCAGT TTTAGGTTTA 
    TCAGGCGAAA TCCAATCAAA GCCATTGGTG CATACCATAA CAAAAATCCG TGGAGCATTG 
    AAAAGAATGG ACAATGAATA TTTGAGATCA GCCATTGATT ATTTGCATGT CCAGCCTAAT 
    TTAGAAGCTT TGAAGCGAGG GCCACACACA TTTAATAATC CAAACATCAA TATTGTGAGT 
    TGGATGACAA TGCCGATATA TGATGCTGAC TTTGGCTGGG GTCGACCCTC TTTTATGGGG 
    CCAGCAGTCG TTCTCTTCGA AGGCATGGCA TACATAACTC GAAGCCCAAG TAACGATGGG 
    AGCTTCATGA TATTTATTTG CTTAGAAAGC AATCACATGG AACTCTTCAA GAAGTTCTTT 
    TACGATTTTT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006382508.1
    CDS183..1514
    Translation

    Target ORF information:

    RefSeq Version XM_006382446.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa shikimate O-hydroxycinnamoyltransferase (LOC18098695), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006382446.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGTAAGAG TTGAAATTCG AACAAAACAG TCAACTATTG TGCGACCTGC CGAAGACACG 
    CCAGAAAAAA GCCTATGGAG CTCAAATCTG GACCTCTTGG TGCCAATGGT ACACATCCCA 
    ACAATATACT TCTACAAGCC AGTTAATGGT TCTTCCAATT TTTTTGACCC TCAAGTGCTC 
    AAGGAGGCTC TGAGCAAGGC TCTTGTGCCA TTCCACCATA TGGCAGGGAG ATTAGAGAAG 
    GATGAAAATG GTAGGATGTC GATATTGTGT AACGCCAAAG GGGTTTTATT TGTCGAGGCT 
    GAAACAAGCT CTACCATTGA TGAAGTGGGT GATTTTACTC CCCACTCTGA GATGCTGCAG 
    TTCATTCCAG AAGTCGATCG TTCAAGCATA TTTTCCTATC CTCTACTACT CGCACAGGCA 
    ACCTTCTTCA AATGTGGAGG AGTATGTCTT GGAGTTGGCT TACACCATAT CTTGGGAGAT 
    GGAACTTCTG CAATCCATTT TATCAACTCA TGGTCTGAAA TAGCAAGAGG ACTATCTGTT 
    ACCACCCCAC CGTTCATTGA CCGTACCTTG CTTGATGCTC GAGTTCCTCC TGTCCCTGCT 
    ATGCATCACG TAGAATACGA CCCCCCTCCT ACCTTGAACA CCCATAACTC CGGTGACCAA 
    ACCCTAGAAA TCCAATCAAA TCCGAAACCC ACTTGTGCAA AAATCCTCAC CATCACATTT 
    GATCAACTCC GGACCCTAAA AAACAAGTCT AGAAAAGGCG TTGTTGATGG CACTATCAAC 
    TATAGCACCT TTGAAACCCT AGCAGCACAT ATTTGGCAAT GCACCTGCAA GGCACGTGGA 
    ATCTCGAACG ACCAAGCAAC AAAATTACAC ATTCCAACAG ATGGGCGATC TAGATTGAAC 
    CCACCATTGC CAGCTGGATA CTGTGGCAAT GCTCTTTTCA CAACAGCAGT TTTAGGTTTA 
    TCAGGCGAAA TCCAATCAAA GCCATTGGTG CATACCATAA CAAAAATCCG TGGAGCATTG 
    AAAAGAATGG ACAATGAATA TTTGAGATCA GCCATTGATT ATTTGCATGT CCAGCCTAAT 
    TTAGAAGCTT TGAAGCGAGG GCCACACACA TTTAATAATC CAAACATCAA TATTGTGAGT 
    TGGATGACAA TGCCGATATA TGATGCTGAC TTTGGCTGGG GTCGACCCTC TTTTATGGGG 
    CCAGCAGTCG TTCTCTTCGA AGGCATGGCA TACATAACTC GAAGCCCAAG TAACGATGGG 
    AGCTTCATGA TATTTATTTG CTTAGAAAGC AATCACATGG AACTCTTCAA GAAGTTCTTT 
    TACGATTTTT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0005s02810g ( XM_006382446.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006382508.1 Populus trichocarpa hypothetical protein (POPTR_0005s02810g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa13234
    Clone ID Related Accession (Same CDS sequence) XM_006382446.2 , XM_006382446.1
    Accession Version XM_006382446.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1332bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008471). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGTAAGAG TTGAAATTCG AACAAAACAG TCAACTATTG TGCGACCTGC CGAAGACACG 
    CCAGAAAAAA GCCTATGGAG CTCAAATCTG GACCTCTTGG TGCCAATGGT ACACATCCCA 
    ACAATATACT TCTACAAGCC AGTTAATGGT TCTTCCAATT TTTTTGACCC TCAAGTGCTC 
    AAGGAGGCTC TGAGCAAGGC TCTTGTGCCA TTCCACCATA TGGCAGGGAG ATTAGAGAAG 
    GATGAAAATG GTAGGATGTC GATATTGTGT AACGCCAAAG GGGTTTTATT TGTCGAGGCT 
    GAAACAAGCT CTACCATTGA TGAAGTGGGT GATTTTACTC CCCACTCTGA GATGCTGCAG 
    TTCATTCCAG AAGTCGATCG TTCAAGCATA TTTTCCTATC CTCTACTACT CGCACAGGCA 
    ACCTTCTTCA AATGTGGAGG AGTATGTCTT GGAGTTGGCT TACACCATAT CTTGGGAGAT 
    GGAACTTCTG CAATCCATTT TATCAACTCA TGGTCTGAAA TAGCAAGAGG ACTATCTGTT 
    ACCACCCCAC CGTTCATTGA CCGTACCTTG CTTGATGCTC GAGTTCCTCC TGTCCCTGCT 
    ATGCATCACG TAGAATACGA CCCCCCTCCT ACCTTGAACA CCCATAACTC CGGTGACCAA 
    ACCCTAGAAA TCCAATCAAA TCCGAAACCC ACTTGTGCAA AAATCCTCAC CATCACATTT 
    GATCAACTCC GGACCCTAAA AAACAAGTCT AGAAAAGGCG TTGTTGATGG CACTATCAAC 
    TATAGCACCT TTGAAACCCT AGCAGCACAT ATTTGGCAAT GCACCTGCAA GGCACGTGGA 
    ATCTCGAACG ACCAAGCAAC AAAATTACAC ATTCCAACAG ATGGGCGATC TAGATTGAAC 
    CCACCATTGC CAGCTGGATA CTGTGGCAAT GCTCTTTTCA CAACAGCAGT TTTAGGTTTA 
    TCAGGCGAAA TCCAATCAAA GCCATTGGTG CATACCATAA CAAAAATCCG TGGAGCATTG 
    AAAAGAATGG ACAATGAATA TTTGAGATCA GCCATTGATT ATTTGCATGT CCAGCCTAAT 
    TTAGAAGCTT TGAAGCGAGG GCCACACACA TTTAATAATC CAAACATCAA TATTGTGAGT 
    TGGATGACAA TGCCGATATA TGATGCTGAC TTTGGCTGGG GTCGACCCTC TTTTATGGGG 
    CCAGCAGTCG TTCTCTTCGA AGGCATGGCA TACATAACTC GAAGCCCAAG TAACGATGGG 
    AGCTTCATGA TATTTATTTG CTTAGAAAGC AATCACATGG AACTCTTCAA GAAGTTCTTT 
    TACGATTTTT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006382508.1
    CDS59..1390
    Translation

    Target ORF information:

    RefSeq Version XM_006382446.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0005s02810g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006382446.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGTAAGAG TTGAAATTCG AACAAAACAG TCAACTATTG TGCGACCTGC CGAAGACACG 
    CCAGAAAAAA GCCTATGGAG CTCAAATCTG GACCTCTTGG TGCCAATGGT ACACATCCCA 
    ACAATATACT TCTACAAGCC AGTTAATGGT TCTTCCAATT TTTTTGACCC TCAAGTGCTC 
    AAGGAGGCTC TGAGCAAGGC TCTTGTGCCA TTCCACCATA TGGCAGGGAG ATTAGAGAAG 
    GATGAAAATG GTAGGATGTC GATATTGTGT AACGCCAAAG GGGTTTTATT TGTCGAGGCT 
    GAAACAAGCT CTACCATTGA TGAAGTGGGT GATTTTACTC CCCACTCTGA GATGCTGCAG 
    TTCATTCCAG AAGTCGATCG TTCAAGCATA TTTTCCTATC CTCTACTACT CGCACAGGCA 
    ACCTTCTTCA AATGTGGAGG AGTATGTCTT GGAGTTGGCT TACACCATAT CTTGGGAGAT 
    GGAACTTCTG CAATCCATTT TATCAACTCA TGGTCTGAAA TAGCAAGAGG ACTATCTGTT 
    ACCACCCCAC CGTTCATTGA CCGTACCTTG CTTGATGCTC GAGTTCCTCC TGTCCCTGCT 
    ATGCATCACG TAGAATACGA CCCCCCTCCT ACCTTGAACA CCCATAACTC CGGTGACCAA 
    ACCCTAGAAA TCCAATCAAA TCCGAAACCC ACTTGTGCAA AAATCCTCAC CATCACATTT 
    GATCAACTCC GGACCCTAAA AAACAAGTCT AGAAAAGGCG TTGTTGATGG CACTATCAAC 
    TATAGCACCT TTGAAACCCT AGCAGCACAT ATTTGGCAAT GCACCTGCAA GGCACGTGGA 
    ATCTCGAACG ACCAAGCAAC AAAATTACAC ATTCCAACAG ATGGGCGATC TAGATTGAAC 
    CCACCATTGC CAGCTGGATA CTGTGGCAAT GCTCTTTTCA CAACAGCAGT TTTAGGTTTA 
    TCAGGCGAAA TCCAATCAAA GCCATTGGTG CATACCATAA CAAAAATCCG TGGAGCATTG 
    AAAAGAATGG ACAATGAATA TTTGAGATCA GCCATTGATT ATTTGCATGT CCAGCCTAAT 
    TTAGAAGCTT TGAAGCGAGG GCCACACACA TTTAATAATC CAAACATCAA TATTGTGAGT 
    TGGATGACAA TGCCGATATA TGATGCTGAC TTTGGCTGGG GTCGACCCTC TTTTATGGGG 
    CCAGCAGTCG TTCTCTTCGA AGGCATGGCA TACATAACTC GAAGCCCAAG TAACGATGGG 
    AGCTTCATGA TATTTATTTG CTTAGAAAGC AATCACATGG AACTCTTCAA GAAGTTCTTT 
    TACGATTTTT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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