ORF » Species Summary » Populus trichocarpa » POPTR_0001s44460g cDNA ORF clone

POPTR_0001s44460g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0001s44460g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0001s44460g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa04457 XM_006370579.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0001s44460g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa420278 XM_024593489.1
Latest version!		 Populus trichocarpa pectinesterase 3 (LOC18095914), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0001s44460g ( XM_006370579.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006370641.1 Populus trichocarpa hypothetical protein (POPTR_0001s44460g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa04457
    Clone ID Related Accession (Same CDS sequence) XM_006370579.1
    Accession Version XM_006370579.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 624bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGAATCATG ACACACAATC TTGTATGGAC CCTAATGTGA TGGAGGCCAA GGTGGTTGTG 
    AGTTCCTGTG GCCATGATGG ACCATTTGGT GCTACTGGGG TCAAGAGGCT TAAGAGCATT 
    GGTATGATTG TTAGTGTGCC AGGAATGAAT GCCCTTGACA TGAATGCAGC TGAAGATGCC 
    ATTGAGAGGC TTCCTAGGGA GATTGTGCCT GGAATGATTG TCACTGGCAT GGAAAGGAAT 
    AGATGGAAGT GGGACTATAC CACAGTTCAA GAAGCTGTGA GCTCGGCTCC AGATAAAAGT 
    AAAAGACGGT TTGTGATATA TGTGAAAAGC TGGAATTATG AGGAGAAAGT GGAAGTTGCA 
    AAGAAGAACA AAAATGTTAT GATTGCTGGT GAAGGTAGGG ATTTCACCAT CGTAACTGGT 
    AGCCTCGGTG TCTTGGATGG ATCTCCAACC TTTAGATCTG CTAGCTTGGA CCAGAAAAGC 
    ACCAAGCTGT GGCTCTCATT GCAAGGAAGC CTATGGCAAA CCAAAAGAAC ATGGTCACTG 
    CACAAGGTAG GATTGATCCA AATCAAAATA CTGGGATCTC AATCCAGAAC TGTATCATTA 
    TTCCAAACCC TGATCTTGAA TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006370641.1
    CDS1..624
    Translation

    Target ORF information:

    RefSeq Version XM_006370579.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0001s44460g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006370579.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGAATCATG ACACACAATC TTGTATGGAC CCTAATGTGA TGGAGGCCAA GGTGGTTGTG 
    AGTTCCTGTG GCCATGATGG ACCATTTGGT GCTACTGGGG TCAAGAGGCT TAAGAGCATT 
    GGTATGATTG TTAGTGTGCC AGGAATGAAT GCCCTTGACA TGAATGCAGC TGAAGATGCC 
    ATTGAGAGGC TTCCTAGGGA GATTGTGCCT GGAATGATTG TCACTGGCAT GGAAAGGAAT 
    AGATGGAAGT GGGACTATAC CACAGTTCAA GAAGCTGTGA GCTCGGCTCC AGATAAAAGT 
    AAAAGACGGT TTGTGATATA TGTGAAAAGC TGGAATTATG AGGAGAAAGT GGAAGTTGCA 
    AAGAAGAACA AAAATGTTAT GATTGCTGGT GAAGGTAGGG ATTTCACCAT CGTAACTGGT 
    AGCCTCGGTG TCTTGGATGG ATCTCCAACC TTTAGATCTG CTAGCTTGGA CCAGAAAAGC 
    ACCAAGCTGT GGCTCTCATT GCAAGGAAGC CTATGGCAAA CCAAAAGAAC ATGGTCACTG 
    CACAAGGTAG GATTGATCCA AATCAAAATA CTGGGATCTC AATCCAGAAC TGTATCATTA 
    TTCCAAACCC TGATCTTGAA TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0001s44460g ( XM_024593489.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024449257.1 Populus trichocarpa pectinesterase 3 (LOC18095914), mRNA.
    Price & Availability↑
    CloneID OPa420278
    Clone ID Related Accession (Same CDS sequence) XM_024593489.1
    Accession Version XM_024593489.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 513bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product pectinesterase 3
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 100% of CDS bases ##RefSeq-Attributes-END## 

    1
    61
    121
    181
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    301
    361
    421
    481
    ATGGTTGTTG CTAGTCTTTC AGCCTCTGAT ACTGGTATTG TTCAGCCATT AAAGAGATGG 
    AAGTGGGACT ATACCACAGT TCAAGAAGCT GTGAGCTCGG CTCCAGATAA AAGTAAAAGA 
    CGGTTTGTGA TATATGTGAA AAGCTGGAAT TATGAGGAGA AAGTGGAAGT TGCAAAGAAG 
    AACAAAAATG TTATGATTGC TGGTGAAGGA CCAGAAAAGC ACCAAGCTGT GGCTCTCATT 
    GCAAGGAAGT CTATGGCAAA CCAAAAGAAC ATGGTCACTG CACAAGGTAG GATTGATCCA 
    AATCAAAATA CTGGGATCTC AATCCAGAAC TGTATCATTA TTCCAAACCC TGATCTTGAA 
    TTAGGGCAGA AAAAGTTCCT ACGTACTTCT TCAAATAGAG AGCCAGGTGC AGGTGTCAGC 
    AAGAGAGTGA ATCGGCCTGG ATATCATGTC ATTACTGATC CAAATGAGGC CAGGCAATTC 
    ACTGTGGCAG AGCTGATACA AGGAGAAGCC TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024449257.1
    CDS1..513
    Translation

    Target ORF information:

    RefSeq Version XM_024593489.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa pectinesterase 3 (LOC18095914), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024593489.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGGTTGTTG CTAGTCTTTC AGCCTCTGAT ACTGGTATTG TTCAGCCATT AAAGAGATGG 
    AAGTGGGACT ATACCACAGT TCAAGAAGCT GTGAGCTCGG CTCCAGATAA AAGTAAAAGA 
    CGGTTTGTGA TATATGTGAA AAGCTGGAAT TATGAGGAGA AAGTGGAAGT TGCAAAGAAG 
    AACAAAAATG TTATGATTGC TGGTGAAGGA CCAGAAAAGC ACCAAGCTGT GGCTCTCATT 
    GCAAGGAAGT CTATGGCAAA CCAAAAGAAC ATGGTCACTG CACAAGGTAG GATTGATCCA 
    AATCAAAATA CTGGGATCTC AATCCAGAAC TGTATCATTA TTCCAAACCC TGATCTTGAA 
    TTAGGGCAGA AAAAGTTCCT ACGTACTTCT TCAAATAGAG AGCCAGGTGC AGGTGTCAGC 
    AAGAGAGTGA ATCGGCCTGG ATATCATGTC ATTACTGATC CAAATGAGGC CAGGCAATTC 
    ACTGTGGCAG AGCTGATACA AGGAGAAGCC TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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