ORF » Species Summary » Phaeodactylum tricornutum CCAP 1055/1 » PHATR_54643 cDNA ORF clone

PHATR_54643 cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1

The following PHATR_54643 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PHATR_54643 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPb08437 XM_002185665.1
Latest version!		 Phaeodactylum tricornutum CCAP 1055/1 predicted protein mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    PHATR_54643 ( XM_002185665.1 ) cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1 -> XP_002185701.1 Phaeodactylum tricornutum CCAP 1055/1 predicted protein mRNA.
    Price & Availability↑
    CloneID OPb08437
    Clone ID Related Accession (Same CDS sequence) XM_002185665.1
    Accession Version XM_002185665.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1293bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_011679). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGACAGCCA TTCGATTGGC GGGGCCCACT CTCAGCTTAA CCGCCTTTCT TGCTATATAT 
    GCTCGAGCGC AAGCCGATTA TGGTGTGGAC TGCTCCTTCC CCATCCACAG CAAAGAGTTC 
    ACGTGCGGCA ACCTTCTCGG CGACCGAAAG AAAGTTTATG AAGACTTCAT GGATGGATGC 
    AGAAAGCGTT ATGGTAGTAA GGCATCACGA TGCGATTCCA CCGAGGACGA TCGTATCGAA 
    ATGAGTTTGC GGCAACCTCA ATCGATGGTG AACTATACTG AAACGGGCTT CAAAAAAGTA 
    CGCGCCCCAA AGAATGTGAT GGATTTGCTC AATGCTCACT GGAAAAGGAA TAAAGAAGGC 
    CTCTTCGATC GTGAGGAGAT CTGGCCTGCC GGTAACGTGT ACGTGAATCA CTGGGCAAGT 
    CCAACATACA TGTCATCTGT GGAAGACACT AATACTCGTG GAGGTGGATA TGCGTTAAAA 
    AAAGCCGTTT GGGATGCGGT CAAACCTGTC ATTGAATCGT GGACCGGCAT GGAACAAAAA 
    CCAATCAGCA TGTACGGTAT CCGTGCATAC ACGGATGGTG CAATATTGAA TCCTCACGTC 
    GACCGACTGC CGTTGGTTAG CTCCTGCATC ATTAATGTGG ACCAGGACGT TGATGAAGAT 
    TGGCCTCTCG AAGTCTATGA CAGACATGAC CGAGCCGTCA ACGTTACCAT GCAACCGGGT 
    GACCTTGTCT TGTACGAGTC AGGATCTCTA ATGCATGGAC GCCCTTTTCC TTTGAAAGGT 
    CGCTATTACG CGAACATTTT TATCCATTTC GAACCCACCG GACGCAAGTT AGGGGACACA 
    TCTCTAGCAT ATTTAGACGA ACTCGATGAC ATCCTTCCTC CGTACCTACT TGCCAACTCT 
    CCCGAAACCG ACAACTGGTT GAGAAAGAAT CCGCACGGGT GGAACAAGCC GTCGCCGTCT 
    GCTCCAATTC AGCAAGTAAA TGCCCCGGAG GGACATCACG CTGCGGCCAC TGGGGACATT 
    ACTAGATTGG CCAGACTTGC ACAAACCAAT CGCAAGGCAT TGCACGCCAA GGATAAGAAT 
    GGGTGGCAAC CGCTGCACGA GGCTGTCCGG GCCGATAACA AGGAGGCTGT TGAGCTTTTG 
    ATCAGTTTTG GTGCCGACAA AAATGCCCGC GTGGGAAAGA ATGGGGAAGG TGCTAGCGCT 
    CTAAACCTGG CCTTGGACTA TCTGAACGTT GGAGCACATA CAACGAACTA CCTGTTGAGT 
    ATCGACGCCC AGAACATTGA ACCTGATCTC TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002185701.1
    CDS130..1422
    Translation

    Target ORF information:

    RefSeq Version XM_002185665.1
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Definition Phaeodactylum tricornutum CCAP 1055/1 predicted protein mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002185665.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGACAGCCA TTCGATTGGC GGGGCCCACT CTCAGCTTAA CCGCCTTTCT TGCTATATAT 
    GCTCGAGCGC AAGCCGATTA TGGTGTGGAC TGCTCCTTCC CCATCCACAG CAAAGAGTTC 
    ACGTGCGGCA ACCTTCTCGG CGACCGAAAG AAAGTTTATG AAGACTTCAT GGATGGATGC 
    AGAAAGCGTT ATGGTAGTAA GGCATCACGA TGCGATTCCA CCGAGGACGA TCGTATCGAA 
    ATGAGTTTGC GGCAACCTCA ATCGATGGTG AACTATACTG AAACGGGCTT CAAAAAAGTA 
    CGCGCCCCAA AGAATGTGAT GGATTTGCTC AATGCTCACT GGAAAAGGAA TAAAGAAGGC 
    CTCTTCGATC GTGAGGAGAT CTGGCCTGCC GGTAACGTGT ACGTGAATCA CTGGGCAAGT 
    CCAACATACA TGTCATCTGT GGAAGACACT AATACTCGTG GAGGTGGATA TGCGTTAAAA 
    AAAGCCGTTT GGGATGCGGT CAAACCTGTC ATTGAATCGT GGACCGGCAT GGAACAAAAA 
    CCAATCAGCA TGTACGGTAT CCGTGCATAC ACGGATGGTG CAATATTGAA TCCTCACGTC 
    GACCGACTGC CGTTGGTTAG CTCCTGCATC ATTAATGTGG ACCAGGACGT TGATGAAGAT 
    TGGCCTCTCG AAGTCTATGA CAGACATGAC CGAGCCGTCA ACGTTACCAT GCAACCGGGT 
    GACCTTGTCT TGTACGAGTC AGGATCTCTA ATGCATGGAC GCCCTTTTCC TTTGAAAGGT 
    CGCTATTACG CGAACATTTT TATCCATTTC GAACCCACCG GACGCAAGTT AGGGGACACA 
    TCTCTAGCAT ATTTAGACGA ACTCGATGAC ATCCTTCCTC CGTACCTACT TGCCAACTCT 
    CCCGAAACCG ACAACTGGTT GAGAAAGAAT CCGCACGGGT GGAACAAGCC GTCGCCGTCT 
    GCTCCAATTC AGCAAGTAAA TGCCCCGGAG GGACATCACG CTGCGGCCAC TGGGGACATT 
    ACTAGATTGG CCAGACTTGC ACAAACCAAT CGCAAGGCAT TGCACGCCAA GGATAAGAAT 
    GGGTGGCAAC CGCTGCACGA GGCTGTCCGG GCCGATAACA AGGAGGCTGT TGAGCTTTTG 
    ATCAGTTTTG GTGCCGACAA AAATGCCCGC GTGGGAAAGA ATGGGGAAGG TGCTAGCGCT 
    CTAAACCTGG CCTTGGACTA TCTGAACGTT GGAGCACATA CAACGAACTA CCTGTTGAGT 
    ATCGACGCCC AGAACATTGA ACCTGATCTC TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


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