LINJ_11_0890 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_11_0890
Entrez Gene ID	5067267
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001463852.1	XP_001463889.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_11_0890 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_11_0890 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc01167	XM_001463852.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_11_0890 ( XM_001463852.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001463889.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

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CloneID	OLc01167
Clone ID Related Accession (Same CDS sequence)	XM_001463852.1
Accession Version	XM_001463852.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3033bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009395). COMPLETENESS: incomplete on both ends.

ATGGAAGATA CGGCGGCAAT GACTCCGCTT CCCCAGCAAC CACCGACGCC CCCAACGGCG 
TCTCCATACA TCACCCCCGA GTCCAAAGAA AAGGGTGATG CCGGTATCTA CGCGGCACTC 
GACGCCATGC AGTTGTCGCG TGCCCTACAC GGCGTCACAA GTAGTCGGTT GGACCAACAG 
CAGCTGCAGC AGGCAGCAGC GGCGCGCGGG GCGTCACCTA CTCCTGGTGG CGACGGTGGT 
GCCACACAGA GCAACGCAGT ACGGCTCGGG ATGGAGCCGG TAAGCTACCG GCAAGGAACA 
TTAGCGGATG TGCAGGCCAT GTACAATGCG GCGGTTGTGG AGGCTGTACA GGCGGCCAGC 
GGCGACGCAG CCGCTGAGGC GGTGGAGCGT GGTGTCGGCG GAGCTGCTGT CACTGCGACC 
GCTGTCGGTT TGCCAGACGA CGTGGCGACG CTGCGCAGTG CGCTGCCACT TGTGCACGAG 
CTGAAGCCGC GCGACCCGCT CAATTTTGAT GCGCTGCAGC GCCTTTTCGC CCTCATGGAA 
GAAGCCGTCG GCGCTGCGGA AGCGGCTGAA GGGGTCGGAA GCGGCGGTAT CACGGCGCTG 
CTGCTTTCAA ACGGTGTGGT GGACCCGGCA CGACAGCCGT CGCCGTCGAC GGAAGCGTGG 
GAGGCCAAGT ACCGTGAAGT CTACGCTCGC TACACACTCC CGGTCGCCCA TGCAGCCGCC 
TCGTCTGCCG GCTCGCACAA CTTTGACGAG GAGGACGACG ACACGCAGCG GGAGGTGGAC 
GCGCAGAACA ACGCAGACCT GCAGGAGCTC TGTGAGAAGC TCGGCATCAC CTATGAAACC 
CACGCAAAGG CGGTGCGCGA CGTTGCGTTC TACGAGATGA GTGTGTTTCC CTTGTTGTGC 
GCCTACCTCA GCCGCATCAA CGAGCCCACC GCCGGCGGGC GTGATGCCGC TACAGTGGCC 
GCGGTGGCCT GCTCGCGGGT GAGGGTGCTG GATTTGTCGT ACAACAACAT TGGCGCGCCA 
GTGGTGTCGA CAGCCCCGGG AGAGGACGGG GGCAGAGGCG ATGTTGCGCC AGTGCGCCAG 
CTATCCCCGC TGCGAGCCCT CGCGGCCATG CTGGACGCGA ACGAGTCCTT GCGGTACCTC 
AACCTGCGCG CCAACGCACT GGGCCCCCGC GGCGTTGGCA TCATCGCCAA GGCACTGACG 
AAGAACATTG CCCTCTGCGG TATTGATCTC TCGGCAAACG CCCTGAACGT GGCAGCGGAC 
ACAGAAGAGG TTGAGGACCC GCTGTACGAG CCGGAAGACC CCGTCTTTGG GGAGTCCTAC 
GAGGGCCTCG AGGCGCTGGC GGAGGTGCTC AAGAAGAATA AGTTCCTGCG CGTGCTGCGG 
CTGGCTGAGA ACGGCCTGCA CGCTGGCGAG GACCTGACGG CACCCCCACC CGAGGAGGAC 
GGTGAGGAGG CGGACGAGGA AGCTTCGGAG GAGGCGGCGG CAGCTACGGC AGGGGCACAG 
GCACCCCACC TCGGCCTGTC CTTTGCCGAT GCGCAGGAGC AATGGCAGAG CATACCGCTC 
TGGACACTCA TCAGTCCACT CTACCGATAT CAGCGCCTTC GTGCACTTGA CCTCTCAAAG 
AACTTACTGG GCAACGACGG CGTGCGCATG CTAGCGGTGG CGTTGTCGCA CAACACGTCT 
GTGGAAGTGC TGGATTTGAC GGACAACGCT ATCGGGTATG CGGGTCTGGG CCACCTCGCT 
CGGTATGTTC TGGGCAGGAA CGTGGCGGTC GGGGCTGCCT CGGCTGCCGC GGCGCCGCAG 
AGTGCGCTTC ACACGCTTAT CCTGCGGCAG AACCCGCTCG CGTGCGTCGG TGGCGCAGCA 
GACGCCGCTT CTGGTGTGGA CGCGCGCCGC CGCCGTCTTA CCAAGCGCCA GCAGAAGAGC 
GCCTTAGCGG CTGTGCGGAG GTTTGCGTCT GCGCTGGAGG GGCCACGTGG CTTGCGCCGC 
CTAGTCATGG CGAACACCTA CCTTGGACCG ACTTTCAGCA GTATCCTGCT GCGCTCCCTC 
GCCCGCGCAG AGGCGCTGGA AGAGCTGGAC TTTGCGTACA ACCACGCCTG CGGTGACTAT 
CCCTCCAACT TCGACGGCAC TGCTGCCCAG GAGCTCGCCG GGCTGCTGTA CCAGCTGCAG 
CGGCACGGCC CACCGCGGCT GCAATGCGTG TGTTTCGACG GCAACAACTT GACCGCTGCA 
GGTGTGGCGG CGTTGATCCC CCCTGAGGTG CATGTGGCGT TTCCGCAGAC CCTGCACAAG 
CTCACGCTGG GCCGCAACAC TCTCGGGGAC GATCTCGGGT CACTCAGCCA GCTGCTAGCT 
GCGGGGGCCA CCGCAATCAC CCACCTCGAC ATCTCCTACA ACAATATCTC AACTGTGGCG 
TCGCTGCTGC CTGGCCTCGC CACCGCAACG TCGCTGAGAG AGCTGAACAT GAGCCATAAC 
AATCTCGGTC TTCAGGAAGG GCTTCTGCGT GGGATAACGC CGGCGCAGCA AGAGATGGAG 
GTTGCCCAGC TCTTTCAAGG CCTTGCGCAG CTGCCGAATC TCGAGGTGCT CGACATCAGT 
CACAACGACT GGCGCGCCAC ACACATCGAG CAGCTCAGCG CTTTCTTCTC CAATACGACT 
TTGGCCACAG CGCTACGCAA ACTCGACGTG CGCAACACCC CGCACGTCCC GACAGCGCAG 
CTCATGACGC TGCTGCAGTA CGTGGCGAGC CGACCGACGA TGGAGGTGTT TATGGCTACT 
GTTGTGCCAG ACAAGACTGA GGGGGTGGAC GCAGAAGCGG CAGATGCGAA CAGCACAGTT 
GCCCCATGGA CGTTCGACTC GGTGCTGCAG GTGATTCACG GAGTCGTCGT CAACAGCAGC 
TCGCTTCTGG AGGTGGACTG CGGCCTTCTC CAGAGTGACG CGGGCGCGGC TAGCAGCAGC 
GATGACGCGT CGGTGAGCTC TGCGGCGCTT GATGAAGCCC GCGAGCGGCT CCTCCTGAAT 
GTCCTCATGA AGGCGGCGAC GTCGTCGACG TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001463889.1
CDS	1..3033
Translation	MEDTAAMTPLPQQPPTPPTASPYITPESKEKGDAGIYAALDAMQLSRALHGVTSSRLDQQQLQQAAAARGASPTPGGDGGATQSNAVRLGMEPVSYRQGTLADVQAMYNAAVVEAVQAASGDAAAEAVERGVGGAAVTATAVGLPDDVATLRSALPLVHELKPRDPLNFDALQRLFALMEEAVGAAEAAEGVGSGGITALLLSNGVVDPARQPSPSTEAWEAKYREVYARYTLPVAHAAASSAGSHNFDEEDDDTQREVDAQNNADLQELCEKLGITYETHAKAVRDVAFYEMSVFPLLCAYLSRINEPTAGGRDAATVAAVACSRVRVLDLSYNNIGAPVVSTAPGEDGGRGDVAPVRQLSPLRALAAMLDANESLRYLNLRANALGPRGVGIIAKALTKNIALCGIDLSANALNVAADTEEVEDPLYEPEDPVFGESYEGLEALAEVLKKNKFLRVLRLAENGLHAGEDLTAPPPEEDGEEADEEASEEAAAATAGAQAPHLGLSFADAQEQWQSIPLWTLISPLYRYQRLRALDLSKNLLGNDGVRMLAVALSHNTSVEVLDLTDNAIGYAGLGHLARYVLGRNVAVGAASAAAAPQSALHTLILRQNPLACVGGAADAASGVDARRRRLTKRQQKSALAAVRRFASALEGPRGLRRLVMANTYLGPTFSSILLRSLARAEALEELDFAYNHACGDYPSNFDGTAAQELAGLLYQLQRHGPPRLQCVCFDGNNLTAAGVAALIPPEVHVAFPQTLHKLTLGRNTLGDDLGSLSQLLAAGATAITHLDISYNNISTVASLLPGLATATSLRELNMSHNNLGLQEGLLRGITPAQQEMEVAQLFQGLAQLPNLEVLDISHNDWRATHIEQLSAFFSNTTLATALRKLDVRNTPHVPTAQLMTLLQYVASRPTMEVFMATVVPDKTEGVDAEAADANSTVAPWTFDSVLQVIHGVVVNSSSLLEVDCGLLQSDAGAASSSDDASVSSAALDEARERLLLNVLMKAATSST

Target ORF information:

RefSeq Version	XM_001463852.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001463852.1

ORF Insert Sequence:

ATGGAAGATA CGGCGGCAAT GACTCCGCTT CCCCAGCAAC CACCGACGCC CCCAACGGCG 
TCTCCATACA TCACCCCCGA GTCCAAAGAA AAGGGTGATG CCGGTATCTA CGCGGCACTC 
GACGCCATGC AGTTGTCGCG TGCCCTACAC GGCGTCACAA GTAGTCGGTT GGACCAACAG 
CAGCTGCAGC AGGCAGCAGC GGCGCGCGGG GCGTCACCTA CTCCTGGTGG CGACGGTGGT 
GCCACACAGA GCAACGCAGT ACGGCTCGGG ATGGAGCCGG TAAGCTACCG GCAAGGAACA 
TTAGCGGATG TGCAGGCCAT GTACAATGCG GCGGTTGTGG AGGCTGTACA GGCGGCCAGC 
GGCGACGCAG CCGCTGAGGC GGTGGAGCGT GGTGTCGGCG GAGCTGCTGT CACTGCGACC 
GCTGTCGGTT TGCCAGACGA CGTGGCGACG CTGCGCAGTG CGCTGCCACT TGTGCACGAG 
CTGAAGCCGC GCGACCCGCT CAATTTTGAT GCGCTGCAGC GCCTTTTCGC CCTCATGGAA 
GAAGCCGTCG GCGCTGCGGA AGCGGCTGAA GGGGTCGGAA GCGGCGGTAT CACGGCGCTG 
CTGCTTTCAA ACGGTGTGGT GGACCCGGCA CGACAGCCGT CGCCGTCGAC GGAAGCGTGG 
GAGGCCAAGT ACCGTGAAGT CTACGCTCGC TACACACTCC CGGTCGCCCA TGCAGCCGCC 
TCGTCTGCCG GCTCGCACAA CTTTGACGAG GAGGACGACG ACACGCAGCG GGAGGTGGAC 
GCGCAGAACA ACGCAGACCT GCAGGAGCTC TGTGAGAAGC TCGGCATCAC CTATGAAACC 
CACGCAAAGG CGGTGCGCGA CGTTGCGTTC TACGAGATGA GTGTGTTTCC CTTGTTGTGC 
GCCTACCTCA GCCGCATCAA CGAGCCCACC GCCGGCGGGC GTGATGCCGC TACAGTGGCC 
GCGGTGGCCT GCTCGCGGGT GAGGGTGCTG GATTTGTCGT ACAACAACAT TGGCGCGCCA 
GTGGTGTCGA CAGCCCCGGG AGAGGACGGG GGCAGAGGCG ATGTTGCGCC AGTGCGCCAG 
CTATCCCCGC TGCGAGCCCT CGCGGCCATG CTGGACGCGA ACGAGTCCTT GCGGTACCTC 
AACCTGCGCG CCAACGCACT GGGCCCCCGC GGCGTTGGCA TCATCGCCAA GGCACTGACG 
AAGAACATTG CCCTCTGCGG TATTGATCTC TCGGCAAACG CCCTGAACGT GGCAGCGGAC 
ACAGAAGAGG TTGAGGACCC GCTGTACGAG CCGGAAGACC CCGTCTTTGG GGAGTCCTAC 
GAGGGCCTCG AGGCGCTGGC GGAGGTGCTC AAGAAGAATA AGTTCCTGCG CGTGCTGCGG 
CTGGCTGAGA ACGGCCTGCA CGCTGGCGAG GACCTGACGG CACCCCCACC CGAGGAGGAC 
GGTGAGGAGG CGGACGAGGA AGCTTCGGAG GAGGCGGCGG CAGCTACGGC AGGGGCACAG 
GCACCCCACC TCGGCCTGTC CTTTGCCGAT GCGCAGGAGC AATGGCAGAG CATACCGCTC 
TGGACACTCA TCAGTCCACT CTACCGATAT CAGCGCCTTC GTGCACTTGA CCTCTCAAAG 
AACTTACTGG GCAACGACGG CGTGCGCATG CTAGCGGTGG CGTTGTCGCA CAACACGTCT 
GTGGAAGTGC TGGATTTGAC GGACAACGCT ATCGGGTATG CGGGTCTGGG CCACCTCGCT 
CGGTATGTTC TGGGCAGGAA CGTGGCGGTC GGGGCTGCCT CGGCTGCCGC GGCGCCGCAG 
AGTGCGCTTC ACACGCTTAT CCTGCGGCAG AACCCGCTCG CGTGCGTCGG TGGCGCAGCA 
GACGCCGCTT CTGGTGTGGA CGCGCGCCGC CGCCGTCTTA CCAAGCGCCA GCAGAAGAGC 
GCCTTAGCGG CTGTGCGGAG GTTTGCGTCT GCGCTGGAGG GGCCACGTGG CTTGCGCCGC 
CTAGTCATGG CGAACACCTA CCTTGGACCG ACTTTCAGCA GTATCCTGCT GCGCTCCCTC 
GCCCGCGCAG AGGCGCTGGA AGAGCTGGAC TTTGCGTACA ACCACGCCTG CGGTGACTAT 
CCCTCCAACT TCGACGGCAC TGCTGCCCAG GAGCTCGCCG GGCTGCTGTA CCAGCTGCAG 
CGGCACGGCC CACCGCGGCT GCAATGCGTG TGTTTCGACG GCAACAACTT GACCGCTGCA 
GGTGTGGCGG CGTTGATCCC CCCTGAGGTG CATGTGGCGT TTCCGCAGAC CCTGCACAAG 
CTCACGCTGG GCCGCAACAC TCTCGGGGAC GATCTCGGGT CACTCAGCCA GCTGCTAGCT 
GCGGGGGCCA CCGCAATCAC CCACCTCGAC ATCTCCTACA ACAATATCTC AACTGTGGCG 
TCGCTGCTGC CTGGCCTCGC CACCGCAACG TCGCTGAGAG AGCTGAACAT GAGCCATAAC 
AATCTCGGTC TTCAGGAAGG GCTTCTGCGT GGGATAACGC CGGCGCAGCA AGAGATGGAG 
GTTGCCCAGC TCTTTCAAGG CCTTGCGCAG CTGCCGAATC TCGAGGTGCT CGACATCAGT 
CACAACGACT GGCGCGCCAC ACACATCGAG CAGCTCAGCG CTTTCTTCTC CAATACGACT 
TTGGCCACAG CGCTACGCAA ACTCGACGTG CGCAACACCC CGCACGTCCC GACAGCGCAG 
CTCATGACGC TGCTGCAGTA CGTGGCGAGC CGACCGACGA TGGAGGTGTT TATGGCTACT 
GTTGTGCCAG ACAAGACTGA GGGGGTGGAC GCAGAAGCGG CAGATGCGAA CAGCACAGTT 
GCCCCATGGA CGTTCGACTC GGTGCTGCAG GTGATTCACG GAGTCGTCGT CAACAGCAGC 
TCGCTTCTGG AGGTGGACTG CGGCCTTCTC CAGAGTGACG CGGGCGCGGC TAGCAGCAGC 
GATGACGCGT CGGTGAGCTC TGCGGCGCTT GATGAAGCCC GCGAGCGGCT CCTCCTGAAT 
GTCCTCATGA AGGCGGCGAC GTCGTCGACG TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_11_0890 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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