ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » THAPSDRAFT_1838 cDNA ORF clone

THAPSDRAFT_1838 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPSDRAFT_1838 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPSDRAFT_1838 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf03222 XM_002286974.1
Latest version!		 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    THAPSDRAFT_1838 ( XM_002286974.1 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002287010.1 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OTf03222
    Clone ID Related Accession (Same CDS sequence) XM_002286974.1
    Accession Version XM_002286974.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2409bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Thalassiosira pseudonana CCMP1335
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012064). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    ATGGCTTCCT CCAACGAACA ACCCTCCACT GCCAAGACTT CCTCTCACAT CACCATGAAC 
    CAAATGCCCA TGAACGTGAC CAAATCCTCT CGCGGAGTTT CTAAATTGTC CTCTCGGCAC 
    CATCGACGCA GACGTAGGGA GAGCCGAGGT GATCGAGGTG GCAGTGGAAG TGACGGTGGC 
    AAGGAGGATA GGGTGCCCAT TCCTTCCTTT TCGTTGACTC CTCCATCTGC TAATATTGCG 
    GCTGCTAATG CTAATGATGG TGGCCGTGAT AAAGAAATGG GCAAGGTTGG TTCGTCGTCG 
    GTGCGGTTGA AGAGTGTCAA TGATGGAGGA GAGGCATTGA AGGAGAATGT CAAGGTGAAT 
    TCACAGTCGT CGATTCCAAT GGTACCCATT GACAATGCAA AGAAGGAGAT CAACACCAAA 
    TCTACGGGTG TAGGCACTTC AACCCTAATT CAATCCGAGA CAATCTCCAG TAATGAAGAA 
    GAATCGAAAG ATGAGTGCGT ACCGAGTACT GAAGGAGTTG TCGTGTGTGC AACTGCGCCA 
    ATAAAACAAC CAGCTGTTGA CACTAGAATG GAGGTAACAA CAACGGTGGG AAGTGATTGC 
    AGTCAACAAT TATTGAAGAG TGTACAAAAC GAAGAAGGCA ATCAATCTGC ATCCATTACA 
    ACTTCAAAGT ACTTCTCCAA CCCTTCGGGG GAATTAGTAT CCCTGATGGC AACATTCAGG 
    GCAGATATAG GGGAGAGTAA TATAGATCTT GGTCCAGGCA AACAGAAAGT GGATAAGTCT 
    TTGTCTTCTC TTGGAGGGGG GTACCAAATT GAATCTCGGA CAAAGCCATC TTCGGGTGCT 
    GGTGGAGAGC AATGCTGGGC TTTGTCCAAT CAGAAACAAG CCACAAAGTC TGATGTCTCT 
    AGAAAGCAAT CTGTGATCAT AGTGCAATCA AAAACTTCAT CTCAACAAAC ACAACCAACT 
    AGCAATACCA CAGTCGCAAG CAAAGCTGCT AATGTGAAAC CATCATTCCA CGTAGATCCA 
    TCTTTAACGG GGTCTCGGTC TTTGGGTTTG ACTAAAGCTG CGACAAAGGG TGCCCCAAAG 
    CCGAAAAACA AAATGCAAGG ATATGTTACG GGGAGTAGAG TTGACTGCAT TGAAATGTCT 
    GAGACAATAA GAACCAAAGA AGTGAAAGCA AATGGCAAGG GGAGTGATTG CCCTTTTGAG 
    GAAGAGGTGC AGCCAAATAG TACGAAAAAT GCTAAGCGTC CTTACAAACA AAAGTCATGC 
    GACAAAATTG AGTCTAAACT GAAAAGCAAA GAACCAAAGC CGACAAAGCT GTCTGCCTCC 
    AGCAAGCCAA CTGCCGACGA TAACGACACT TCTGATGAAT TGGACGTGAC AAAACTATTC 
    AAACGTCCGA AGAAAAGGAA GAATGCAGCT AATGCAACAA CAGCTAAGTC AAAAGCAGAA 
    ATCATTGAAA TCATGGACGA TAACGACAAT GAGAGCCCTC CACAGAAGGA CTCAGCCAGC 
    AGCAAGATTG GTCTGGCCGG AGCACAGGCA ACGAAACCAA GGAAGAAGAG GAAAGTTGCA 
    TCTACCTTAC CGAGTTCCTC GTCTGATTCC TCTCAAGACG AATTTGGATT AGACACCTCG 
    GTAAAACACA AACAATCAAA AGGTGCTACT AAATCCAATG GCAAAACTGC TCCTTCTCGC 
    GCCGTTGGTA GTAAGAGAGC CAAGACAGAC GACTATGCTT ATCAACCTAC ATTGACTCAA 
    ATGGTCAACG GCTCAACCGG CGAGGATGAG TGTGCAGATC GCTATGAAAA CGACGACGAA 
    GTGCACGTTT CTACTTCAGC AGTCGGTAGC CCTGAAAGTG GATGTTCGGA CCACGACTAT 
    GTGGAGCACT CCATCCAACA ACATGGCACC ATGGATGACT TTAGAGAGGC CGCAGCGCGA 
    GGGAAACGAA GCACAGGAAA CGTATGGGAT ATGGCAGGAA CTGGCCATGG CTATGATGAT 
    GTAGGCATCG ATGCATTGTT AAAAGTGCTT GATGAAACGG AAGAGCTTGA TAGCGATGGT 
    GGAGAGAAGT GTGATTCAAC ATACGGAAAA CTGCAGCCTC TTACTCAGAG GGGTGAGTCC 
    GCGGTGGAAA AGATTGAAAG CTCAGTGCTG ATGGATCAAT CCAAGGTTGA TGCTATTACA 
    CGCGGTTGTC CCAACTGGAA AGAGAACGTT CACTATGTCC AACGCCAATA TGATACAGAC 
    GAGTTGAATG ATGCCTTACA GCAAGTTCAG GAGAAAAGGT CAAGGATGGA AGCACTGAAG 
    GCTCAACTTC TTCAAGCGTA TGATGATAGA GTTGAAGCGT TGGAGTTGTT TGAGCGTTCC 
    GTCCAGAGCA GGATCAATGC TCTGTCTGCT GATCAAGAGC AGAGTCAATA CGTTGATGAG 
    GAGTTATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002287010.1
    CDS1..2409
    Translation

    Target ORF information:

    RefSeq Version XM_002286974.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002286974.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    ATGGCTTCCT CCAACGAACA ACCCTCCACT GCCAAGACTT CCTCTCACAT CACCATGAAC 
    CAAATGCCCA TGAACGTGAC CAAATCCTCT CGCGGAGTTT CTAAATTGTC CTCTCGGCAC 
    CATCGACGCA GACGTAGGGA GAGCCGAGGT GATCGAGGTG GCAGTGGAAG TGACGGTGGC 
    AAGGAGGATA GGGTGCCCAT TCCTTCCTTT TCGTTGACTC CTCCATCTGC TAATATTGCG 
    GCTGCTAATG CTAATGATGG TGGCCGTGAT AAAGAAATGG GCAAGGTTGG TTCGTCGTCG 
    GTGCGGTTGA AGAGTGTCAA TGATGGAGGA GAGGCATTGA AGGAGAATGT CAAGGTGAAT 
    TCACAGTCGT CGATTCCAAT GGTACCCATT GACAATGCAA AGAAGGAGAT CAACACCAAA 
    TCTACGGGTG TAGGCACTTC AACCCTAATT CAATCCGAGA CAATCTCCAG TAATGAAGAA 
    GAATCGAAAG ATGAGTGCGT ACCGAGTACT GAAGGAGTTG TCGTGTGTGC AACTGCGCCA 
    ATAAAACAAC CAGCTGTTGA CACTAGAATG GAGGTAACAA CAACGGTGGG AAGTGATTGC 
    AGTCAACAAT TATTGAAGAG TGTACAAAAC GAAGAAGGCA ATCAATCTGC ATCCATTACA 
    ACTTCAAAGT ACTTCTCCAA CCCTTCGGGG GAATTAGTAT CCCTGATGGC AACATTCAGG 
    GCAGATATAG GGGAGAGTAA TATAGATCTT GGTCCAGGCA AACAGAAAGT GGATAAGTCT 
    TTGTCTTCTC TTGGAGGGGG GTACCAAATT GAATCTCGGA CAAAGCCATC TTCGGGTGCT 
    GGTGGAGAGC AATGCTGGGC TTTGTCCAAT CAGAAACAAG CCACAAAGTC TGATGTCTCT 
    AGAAAGCAAT CTGTGATCAT AGTGCAATCA AAAACTTCAT CTCAACAAAC ACAACCAACT 
    AGCAATACCA CAGTCGCAAG CAAAGCTGCT AATGTGAAAC CATCATTCCA CGTAGATCCA 
    TCTTTAACGG GGTCTCGGTC TTTGGGTTTG ACTAAAGCTG CGACAAAGGG TGCCCCAAAG 
    CCGAAAAACA AAATGCAAGG ATATGTTACG GGGAGTAGAG TTGACTGCAT TGAAATGTCT 
    GAGACAATAA GAACCAAAGA AGTGAAAGCA AATGGCAAGG GGAGTGATTG CCCTTTTGAG 
    GAAGAGGTGC AGCCAAATAG TACGAAAAAT GCTAAGCGTC CTTACAAACA AAAGTCATGC 
    GACAAAATTG AGTCTAAACT GAAAAGCAAA GAACCAAAGC CGACAAAGCT GTCTGCCTCC 
    AGCAAGCCAA CTGCCGACGA TAACGACACT TCTGATGAAT TGGACGTGAC AAAACTATTC 
    AAACGTCCGA AGAAAAGGAA GAATGCAGCT AATGCAACAA CAGCTAAGTC AAAAGCAGAA 
    ATCATTGAAA TCATGGACGA TAACGACAAT GAGAGCCCTC CACAGAAGGA CTCAGCCAGC 
    AGCAAGATTG GTCTGGCCGG AGCACAGGCA ACGAAACCAA GGAAGAAGAG GAAAGTTGCA 
    TCTACCTTAC CGAGTTCCTC GTCTGATTCC TCTCAAGACG AATTTGGATT AGACACCTCG 
    GTAAAACACA AACAATCAAA AGGTGCTACT AAATCCAATG GCAAAACTGC TCCTTCTCGC 
    GCCGTTGGTA GTAAGAGAGC CAAGACAGAC GACTATGCTT ATCAACCTAC ATTGACTCAA 
    ATGGTCAACG GCTCAACCGG CGAGGATGAG TGTGCAGATC GCTATGAAAA CGACGACGAA 
    GTGCACGTTT CTACTTCAGC AGTCGGTAGC CCTGAAAGTG GATGTTCGGA CCACGACTAT 
    GTGGAGCACT CCATCCAACA ACATGGCACC ATGGATGACT TTAGAGAGGC CGCAGCGCGA 
    GGGAAACGAA GCACAGGAAA CGTATGGGAT ATGGCAGGAA CTGGCCATGG CTATGATGAT 
    GTAGGCATCG ATGCATTGTT AAAAGTGCTT GATGAAACGG AAGAGCTTGA TAGCGATGGT 
    GGAGAGAAGT GTGATTCAAC ATACGGAAAA CTGCAGCCTC TTACTCAGAG GGGTGAGTCC 
    GCGGTGGAAA AGATTGAAAG CTCAGTGCTG ATGGATCAAT CCAAGGTTGA TGCTATTACA 
    CGCGGTTGTC CCAACTGGAA AGAGAACGTT CACTATGTCC AACGCCAATA TGATACAGAC 
    GAGTTGAATG ATGCCTTACA GCAAGTTCAG GAGAAAAGGT CAAGGATGGA AGCACTGAAG 
    GCTCAACTTC TTCAAGCGTA TGATGATAGA GTTGAAGCGT TGGAGTTGTT TGAGCGTTCC 
    GTCCAGAGCA GGATCAATGC TCTGTCTGCT GATCAAGAGC AGAGTCAATA CGTTGATGAG 
    GAGTTATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kröger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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