ITS2 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following ITS2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ITS2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf05986 XM_002286245.1
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Thalassiosira pseudonana CCMP1335 isoleucine-trna synthetase (ITS2), mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $559.30
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OTf05986
    Clone ID Related Accession (Same CDS sequence) XM_002286245.1
    Accession Version XM_002286245.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3252bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Thalassiosira pseudonana CCMP1335
    Product isoleucine-trna synthetase
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012064).

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    ATGGCGATAC TGGCACCACA AATGAAAAAG ACATTCATCA TGTCTCTTCT CCTCGCTCTC 
    GCCCTCGAGA CGAAACTGGC TGCGTCATTC CAACCATCGG CCAGATTGAT GTCCACCGCT
    ACCTCCTCTC GTGGCCGTTC TATCGCCACT CGTTCCTTCT CTGCACTCCA AGCCGAAGGT
    GGTGGCGGCA AGAAGGACGG CGGAGGAGGA GGGAAAGAAA AGGCCCCCAA AAACGTCTAC
    GCCGACACCA TCATCCTCCC CCAAACAGAC TTCAACCAAC GTGCCAACGC CATCATACGC
    GAACCCGAGC TCCAACAATA CTGGTCCTCC ACCAACCTCT ACTCGAAACT ATCCAAAGCA
    GCTGCCGCTA ACTCTGCCGA GCGATTCATA CTGCATGATG GTCCTCCGTA TGCCAATGGA
    GATTTGCACA TTGGTCACGC GTTGAACAAG TTGTTGAAGG ATTTTATCAA CAGGCATCAG
    ATTTTAAAGG GAAAGCAAGT TCACTATGTT CCTGGGTGGG ATTGTCATGG GTTACCTATT
    GAGTTGAAGG TTCTTCAGAC TATGAAGTCG AAGGAACGTG AGGCGTTGAC TCCCGTGACT
    CTTCGTGAGA AGGCTGCTTC GTTTGCAAAA GAGACGGTGG AGAAGCAAAG TGCCTCGTTT
    CAACGATATG GAGTTATCGG AGACTTTGGC AATCCGTACT TGACTCTTCT TCCTGAGTAT
    GAGGCGGCTC AAATCCGTGT CTTTGGAGAG ATGTACAAAG CGGGACACAT CTTTCGAGGG
    AGGAAACCCG TACACTGGAG TCCATCGAGT AAGACTGCTT TGGCTGAGGC TGAGTTGGAA
    TATCCCGAAG GGCATGTCAG TAAGTCCATC TACGTCGCTT TGGATGTGGT AAGTCCTTCA
    GAGGAGTTGA AGGAATATAT GGAGGAGGGA GAAAAGTTAA AGGTTGCTAT TTGGACGACC
    ACTCCTTGGA CTATTCCTGC CAACTTGGCT GTGGCGATTA ATCCTGATTT GGAGTATTGT
    GTAGTGGATA CTCATGAGAG TGTATTGGAT GGAAAGTCAA AGTTGTTAGT TGCTACGGGG
    TTAGTGAAGA CTTTGGAGTC CAAGTTTCAG CTTCCCGAGG GAGAGCATTT GAAGGTGGTT
    GCTACCTTTC CTGGGTCTAC GCTTGTCGGA ACTACATATC AACATCCTCT GTATGAACGT
    ACTAGTCCCG TTGTTGCTGG TGGTGATTAC ATTACTACGG AGTCTGGTAC GGGACTTGTC
    CACACTGCAC CTGGACACGG TCAAGAAGAT TACCTCACTG GACTCAAGTA CGGATTGGAA
    CTTCTCAGTC CTGTCGATGA TGTTGGTAAA TTCACAGTCG AGGCCGGGTC GTCCACTGTC
    GTTGGTGACG CGTTCGTTGG ACTGAGTGTA TTGGGAGAAG GAAACCTTGC CGTGATTGAG
    GCCTTGGAAC AGGCAGGTGC ATTGATCCGA GCTGAGAATT ATGGACACAA GTATCCTTAC
    GATTGGAGGA CGAAGAAACC GACTATCTTC AGGGCTACTG CTCAGTGGTT TGCTTCTGTT
    GAGGGTTTCA GGGAGGATGC ACTCAAGGCT GTGGATACTG TGAAGTGGAT CCCAGACACT
    GGAAAGAACC GTATCAGATC GTTCGTGGAA TCTCGTGGCG ATTGGTGTAT CTCTCGTCAG
    AGATCGTGGG GAGTACCAAT CCCTGTCTTT TACGACAAGG AAACTGGAGG AACTGAGATT
    CTTCTTGATG AAGACACTCT CAATCACATT CAATCCGTCT TTGCCGAGCA CGGAAGTGAT
    GCTTGGTGGA AGTTGGACAC CGTTGATCTC CTGCCTGAAA AGTACAAGGA TCAAGCTGAC
    AAATGGACAA AGGGAAGCGA TACGATGGAT GTTTGGTTTG ATTCCGGTTC CTCTTGGGCA
    GGTGTGACAC AACAACGTGC CGATGAAGAC ATGGGCTTGG GCTACCCAGC TGATATCTAT
    CTTGAGGGAA GTGATCAACA CAGAGGATGG TTCCAGTCCA GTTTGTTGAC TTCTGTTGCT
    GCAAACAAGG GCCAGGCACC TTACAAATCA GTGCTCACTC ACGGATTCGT TCTTGACGAG
    AAGGGCTTCA AAATGTCAAA GAGTCTTGGA AATGTAGTCA ATCCTTTGCA AGTCATCGAG
    GGTGGAAACA ACAAAAAGCT CGAGCCAGCG TATGGTGCCG ATGTATTGCG TCTGTGGGTT
    GCTTCCGTTG ACTATGCTGG AGATGTTAGA GTCGGAGCGA ACATCATCAA GCAAACGTTC
    GAGTCCTACC GTAAGCTACG CAACACTGCG AGATACTTGA TTGGTAACTT GGCTGACTTT
    AACCCTGCGA CCGATTCTAT TCCTTACGAG GATTTGCCTT CCATGGATAA GTGGATGTTG
    GGAACATTGT CAAGTGTGCT CAATGAGGTA GACGATGCCA TGTCTCAGTA CCAATTCAGC
    AGAGCAACTC AGGAGCTTTT GCGATTTTCT ACTTCAGACT TGTCCAACTT CTACTTGGAC
    GTTGCGAAGG ATCGTCTCTA CATCTCTGCC GTCAATGATG CTCGAAGGAG AAGCTGTCAA
    ACTGTTCTCC ACTCTCTCCT TGAGGGATTT GCAAAGTCGA TTGCTCCAAT CTTGCCACAC
    ATGGCTGAGG ATATCTGGCA AAACCTTCCG TACAAGAAGG AATCCGATTC GTCTGTATTT
    GAAGGCGGTA TTCCGGAGAA ACTCACATCC TACCCAGCAT TTGATTCCGA TAAGTGGGAT
    TTGGTCCGCG ATGTGCGAAC TGATGTCAAC CAAGTGTTGG AGCTCGCACG TAGAGACAAG
    CTAGTCGGAG CTTCGTTGGA TTCAGCTGCC TACATCTACA CGGCTGACGA AAAGATGCGT
    GAAGTCTTGA ACGGATTGGA TGGAGATGAG AGCCTCATCA CTCCAAGCGT CAAGACCAAC
    GGTGTTGACG AGCTTCGTAC TGCTCTCATG ATCTCGCAAG TAAATCTCGT TGACTCGGAA
    GATGCCATCA CGAGTGCATG CGATGCCACC TACATTGCTA AAGGCGAACT CAGTGGCTGC
    ATGATTGGCG TTAAGAAGGC AGATGGTGTC AAGTGTGGCC GTTGCTGGTT CTACGATAAG
    GAAGTCGGCA AGCACGGGCT TAGGTACGGG GAAGATCTTT GCCAGAGGTG TGACGATGCT
    ATATTCTCGT GGGAGGAGAA GACCGGAGGC AAGTTTGCAA CTCCTGCTTT AGAAGAAGCA
    CCTGTAGCGT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002286281.1
    CDS46..3297
    Translation

    Target ORF information:

    RefSeq Version XM_002286245.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 isoleucine-trna synthetase (ITS2), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002286245.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    ATGGCGATAC TGGCACCACA AATGAAAAAG ACATTCATCA TGTCTCTTCT CCTCGCTCTC 
    GCCCTCGAGA CGAAACTGGC TGCGTCATTC CAACCATCGG CCAGATTGAT GTCCACCGCT
    ACCTCCTCTC GTGGCCGTTC TATCGCCACT CGTTCCTTCT CTGCACTCCA AGCCGAAGGT
    GGTGGCGGCA AGAAGGACGG CGGAGGAGGA GGGAAAGAAA AGGCCCCCAA AAACGTCTAC
    GCCGACACCA TCATCCTCCC CCAAACAGAC TTCAACCAAC GTGCCAACGC CATCATACGC
    GAACCCGAGC TCCAACAATA CTGGTCCTCC ACCAACCTCT ACTCGAAACT ATCCAAAGCA
    GCTGCCGCTA ACTCTGCCGA GCGATTCATA CTGCATGATG GTCCTCCGTA TGCCAATGGA
    GATTTGCACA TTGGTCACGC GTTGAACAAG TTGTTGAAGG ATTTTATCAA CAGGCATCAG
    ATTTTAAAGG GAAAGCAAGT TCACTATGTT CCTGGGTGGG ATTGTCATGG GTTACCTATT
    GAGTTGAAGG TTCTTCAGAC TATGAAGTCG AAGGAACGTG AGGCGTTGAC TCCCGTGACT
    CTTCGTGAGA AGGCTGCTTC GTTTGCAAAA GAGACGGTGG AGAAGCAAAG TGCCTCGTTT
    CAACGATATG GAGTTATCGG AGACTTTGGC AATCCGTACT TGACTCTTCT TCCTGAGTAT
    GAGGCGGCTC AAATCCGTGT CTTTGGAGAG ATGTACAAAG CGGGACACAT CTTTCGAGGG
    AGGAAACCCG TACACTGGAG TCCATCGAGT AAGACTGCTT TGGCTGAGGC TGAGTTGGAA
    TATCCCGAAG GGCATGTCAG TAAGTCCATC TACGTCGCTT TGGATGTGGT AAGTCCTTCA
    GAGGAGTTGA AGGAATATAT GGAGGAGGGA GAAAAGTTAA AGGTTGCTAT TTGGACGACC
    ACTCCTTGGA CTATTCCTGC CAACTTGGCT GTGGCGATTA ATCCTGATTT GGAGTATTGT
    GTAGTGGATA CTCATGAGAG TGTATTGGAT GGAAAGTCAA AGTTGTTAGT TGCTACGGGG
    TTAGTGAAGA CTTTGGAGTC CAAGTTTCAG CTTCCCGAGG GAGAGCATTT GAAGGTGGTT
    GCTACCTTTC CTGGGTCTAC GCTTGTCGGA ACTACATATC AACATCCTCT GTATGAACGT
    ACTAGTCCCG TTGTTGCTGG TGGTGATTAC ATTACTACGG AGTCTGGTAC GGGACTTGTC
    CACACTGCAC CTGGACACGG TCAAGAAGAT TACCTCACTG GACTCAAGTA CGGATTGGAA
    CTTCTCAGTC CTGTCGATGA TGTTGGTAAA TTCACAGTCG AGGCCGGGTC GTCCACTGTC
    GTTGGTGACG CGTTCGTTGG ACTGAGTGTA TTGGGAGAAG GAAACCTTGC CGTGATTGAG
    GCCTTGGAAC AGGCAGGTGC ATTGATCCGA GCTGAGAATT ATGGACACAA GTATCCTTAC
    GATTGGAGGA CGAAGAAACC GACTATCTTC AGGGCTACTG CTCAGTGGTT TGCTTCTGTT
    GAGGGTTTCA GGGAGGATGC ACTCAAGGCT GTGGATACTG TGAAGTGGAT CCCAGACACT
    GGAAAGAACC GTATCAGATC GTTCGTGGAA TCTCGTGGCG ATTGGTGTAT CTCTCGTCAG
    AGATCGTGGG GAGTACCAAT CCCTGTCTTT TACGACAAGG AAACTGGAGG AACTGAGATT
    CTTCTTGATG AAGACACTCT CAATCACATT CAATCCGTCT TTGCCGAGCA CGGAAGTGAT
    GCTTGGTGGA AGTTGGACAC CGTTGATCTC CTGCCTGAAA AGTACAAGGA TCAAGCTGAC
    AAATGGACAA AGGGAAGCGA TACGATGGAT GTTTGGTTTG ATTCCGGTTC CTCTTGGGCA
    GGTGTGACAC AACAACGTGC CGATGAAGAC ATGGGCTTGG GCTACCCAGC TGATATCTAT
    CTTGAGGGAA GTGATCAACA CAGAGGATGG TTCCAGTCCA GTTTGTTGAC TTCTGTTGCT
    GCAAACAAGG GCCAGGCACC TTACAAATCA GTGCTCACTC ACGGATTCGT TCTTGACGAG
    AAGGGCTTCA AAATGTCAAA GAGTCTTGGA AATGTAGTCA ATCCTTTGCA AGTCATCGAG
    GGTGGAAACA ACAAAAAGCT CGAGCCAGCG TATGGTGCCG ATGTATTGCG TCTGTGGGTT
    GCTTCCGTTG ACTATGCTGG AGATGTTAGA GTCGGAGCGA ACATCATCAA GCAAACGTTC
    GAGTCCTACC GTAAGCTACG CAACACTGCG AGATACTTGA TTGGTAACTT GGCTGACTTT
    AACCCTGCGA CCGATTCTAT TCCTTACGAG GATTTGCCTT CCATGGATAA GTGGATGTTG
    GGAACATTGT CAAGTGTGCT CAATGAGGTA GACGATGCCA TGTCTCAGTA CCAATTCAGC
    AGAGCAACTC AGGAGCTTTT GCGATTTTCT ACTTCAGACT TGTCCAACTT CTACTTGGAC
    GTTGCGAAGG ATCGTCTCTA CATCTCTGCC GTCAATGATG CTCGAAGGAG AAGCTGTCAA
    ACTGTTCTCC ACTCTCTCCT TGAGGGATTT GCAAAGTCGA TTGCTCCAAT CTTGCCACAC
    ATGGCTGAGG ATATCTGGCA AAACCTTCCG TACAAGAAGG AATCCGATTC GTCTGTATTT
    GAAGGCGGTA TTCCGGAGAA ACTCACATCC TACCCAGCAT TTGATTCCGA TAAGTGGGAT
    TTGGTCCGCG ATGTGCGAAC TGATGTCAAC CAAGTGTTGG AGCTCGCACG TAGAGACAAG
    CTAGTCGGAG CTTCGTTGGA TTCAGCTGCC TACATCTACA CGGCTGACGA AAAGATGCGT
    GAAGTCTTGA ACGGATTGGA TGGAGATGAG AGCCTCATCA CTCCAAGCGT CAAGACCAAC
    GGTGTTGACG AGCTTCGTAC TGCTCTCATG ATCTCGCAAG TAAATCTCGT TGACTCGGAA
    GATGCCATCA CGAGTGCATG CGATGCCACC TACATTGCTA AAGGCGAACT CAGTGGCTGC
    ATGATTGGCG TTAAGAAGGC AGATGGTGTC AAGTGTGGCC GTTGCTGGTT CTACGATAAG
    GAAGTCGGCA AGCACGGGCT TAGGTACGGG GAAGATCTTT GCCAGAGGTG TGACGATGCT
    ATATTCTCGT GGGAGGAGAA GACCGGAGGC AAGTTTGCAA CTCCTGCTTT AGAAGAAGCA
    CCTGTAGCGT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kröger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS