THAPSDRAFT_20880 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPSDRAFT_20880 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPSDRAFT_20880 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf00650 XM_002286246.1
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Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OTf00650
    Clone ID Related Accession (Same CDS sequence) XM_002286246.1
    Accession Version XM_002286246.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2001bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Thalassiosira pseudonana CCMP1335
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012064). COMPLETENESS: incomplete on the 5' end.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    ATGAGCCTAC GATCCTCCTT CAGCCGCCAA TGCAGCCGCA ACCACGGCTA CAATCTCCTA 
    ACATTCACCC TCCTCCTAAC CTTCTGCTCC ACGCTCATGT TCCTAACCTC CGTCATCAAC
    ACTCATCTCA ACTACAATCG AAAACCCTTT CGAGATTGGG CTTTGGCCGG AGGAGTCACC
    TCCACATCTG CAACGTTTCG CGTGAGAGGT CCAAAGAGTG ACGACGGTAT CAAGAGACAG
    TTTGTGGTCA GTACCAATCC GAATTTGGCA TTGGAGAGGG ATATGATATT GGTGACTCCT
    GTTTCGTACG GCGATTTCAC TGCCAAGGAG CACTTGATGA AACGAGTTAG CATTGGTGGT
    TTGACTCCCC TGAGGACGTA TTACTATGGG ATTACACGAC CACATTCCAC TCCCGATAGT
    GCCACCATGG CCGGAGACGT GGGTAAATTT CGTACACCCG CAAAGGAAGG CTCGAGGATG
    AACTTCACAA TAGCCACGGG ATCGTGTTCT CTGACTGGAT CGACGTCTGA AATGTTTACC
    AGTGTTTTGG ATTTGGATCC ATTGATATTC ATTCATGCTG GTGACTTTCA CTATGAAGAC
    TTGGAAACAT TGGACGTTGA CAAACGCTTA GAAGCATACG ACAAGGTTAT GGGTAGTGCA
    TCGCAACGAC TGTTGTACAT GAGGACTATT TTTGCGTACA TATGGGACGA TCATGATTGG
    CTTGGAAACA ATGAGGATTC AGAGGATGGA GAAGCAAGCA ATGTTGCGAA AGAAGGATAT
    ACTTTAGGCA TTCCGCATTA CCCATTGGGT GCAATTGAAG CAGGAACAAC CACAGATGAA
    GGCACTGCTG CAAAGTATCA GGCATTCACA GTTGGTACTG TGAGGTTCAT CATTTCAGAT
    TTGAGAAGTG AGTCAATGAA GTCTACAGAG AACTTTGTTG GTCAAATGTA CAGCACTGAG
    CAAAAGGATT GGCTTTACAA CGAGTTATCA CAAGCAATGA ACTATGACTT TGTGGTTTGG
    GTAACGTCGA GACCGTGGAC TGATCCAGAC GAAGTTGGAT CTGACAGCTG GGGTGGCTTT
    GTCCAAGATC GTGATGAACT GTCTGCGGTT ATTGCATCGA CAGTTGGTGC CGGGCCGAAG
    AACCTGCTGG TATTGAGTGG TGATACCCAT ATGTTGGCTT TTGATGACGG TTCAAGCACT
    GATTACTCTG GTCTGAACGA GACGGGTGGC TTTCCGTTGC TGCATAGCGG CCCACTCACA
    AATTTTGGCA GTGGATTGAA AGACTTCATC ACACCACAAA CAAACTACTA TACAGACGGA
    TGCATGGCAA TCAACTCAGA GGTAAATCAT CAATTCAGTG CATTGAAATT CGTGTTTCCG
    TCCGAAGAAG ATGAAGCAAA TGGTGTTCTA CCGTGCATTG AGATAAAAGG CTATGCTGAT
    AGTTCAGAAA ATTACATTTT CGAGAAGCAG TTGTGTGGTG AAATCATGAG AGAAGGAACT
    CCTAAACAAG ACACGTGTAC ACTACCAAGA CTGTCACAGA CTACAACAAT TATCTTCATT
    TTCGGCTTAT GTCTGATTGG ACTCAACTTG GTTTTGGCTT TGTGGTACCT TGGTTTGAAA
    AGATGCTTAC TTGCACTCAG CTACTTTGGT ATTGGAGTAT TGTTCTACTT CGCAACGGTT
    GCAGCTGCGG CCACTGGGGC TCTGTGTTTT GGTACATTAG GAGTGAATGT CCTCGCAGTA
    TCGATATTCA CGTTGGCACA AGCGTTTGTA GGAACATTGT TCGTGGGATT GGCATTGCAT
    TGCTATTACA CGGACTGCAA AGCGGATACG AACGAAGATA GCGCGACACG CAAGGCCGAA
    GATGATGCGG GATCAGCAGA TGCGCCATTA ATGAACAAGA AAGCGTCAGA CGAAACATCA
    ACAGAGGAGG AGAAGAAGGA CGAAGGAATA GGATTGGAGG TGGCGAGAGA CCATGGCTCT
    GTTTCTGTTT ATTCAATGTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002286282.1
    CDS1..2001
    Translation

    Target ORF information:

    RefSeq Version XM_002286246.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002286246.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    ATGAGCCTAC GATCCTCCTT CAGCCGCCAA TGCAGCCGCA ACCACGGCTA CAATCTCCTA 
    ACATTCACCC TCCTCCTAAC CTTCTGCTCC ACGCTCATGT TCCTAACCTC CGTCATCAAC
    ACTCATCTCA ACTACAATCG AAAACCCTTT CGAGATTGGG CTTTGGCCGG AGGAGTCACC
    TCCACATCTG CAACGTTTCG CGTGAGAGGT CCAAAGAGTG ACGACGGTAT CAAGAGACAG
    TTTGTGGTCA GTACCAATCC GAATTTGGCA TTGGAGAGGG ATATGATATT GGTGACTCCT
    GTTTCGTACG GCGATTTCAC TGCCAAGGAG CACTTGATGA AACGAGTTAG CATTGGTGGT
    TTGACTCCCC TGAGGACGTA TTACTATGGG ATTACACGAC CACATTCCAC TCCCGATAGT
    GCCACCATGG CCGGAGACGT GGGTAAATTT CGTACACCCG CAAAGGAAGG CTCGAGGATG
    AACTTCACAA TAGCCACGGG ATCGTGTTCT CTGACTGGAT CGACGTCTGA AATGTTTACC
    AGTGTTTTGG ATTTGGATCC ATTGATATTC ATTCATGCTG GTGACTTTCA CTATGAAGAC
    TTGGAAACAT TGGACGTTGA CAAACGCTTA GAAGCATACG ACAAGGTTAT GGGTAGTGCA
    TCGCAACGAC TGTTGTACAT GAGGACTATT TTTGCGTACA TATGGGACGA TCATGATTGG
    CTTGGAAACA ATGAGGATTC AGAGGATGGA GAAGCAAGCA ATGTTGCGAA AGAAGGATAT
    ACTTTAGGCA TTCCGCATTA CCCATTGGGT GCAATTGAAG CAGGAACAAC CACAGATGAA
    GGCACTGCTG CAAAGTATCA GGCATTCACA GTTGGTACTG TGAGGTTCAT CATTTCAGAT
    TTGAGAAGTG AGTCAATGAA GTCTACAGAG AACTTTGTTG GTCAAATGTA CAGCACTGAG
    CAAAAGGATT GGCTTTACAA CGAGTTATCA CAAGCAATGA ACTATGACTT TGTGGTTTGG
    GTAACGTCGA GACCGTGGAC TGATCCAGAC GAAGTTGGAT CTGACAGCTG GGGTGGCTTT
    GTCCAAGATC GTGATGAACT GTCTGCGGTT ATTGCATCGA CAGTTGGTGC CGGGCCGAAG
    AACCTGCTGG TATTGAGTGG TGATACCCAT ATGTTGGCTT TTGATGACGG TTCAAGCACT
    GATTACTCTG GTCTGAACGA GACGGGTGGC TTTCCGTTGC TGCATAGCGG CCCACTCACA
    AATTTTGGCA GTGGATTGAA AGACTTCATC ACACCACAAA CAAACTACTA TACAGACGGA
    TGCATGGCAA TCAACTCAGA GGTAAATCAT CAATTCAGTG CATTGAAATT CGTGTTTCCG
    TCCGAAGAAG ATGAAGCAAA TGGTGTTCTA CCGTGCATTG AGATAAAAGG CTATGCTGAT
    AGTTCAGAAA ATTACATTTT CGAGAAGCAG TTGTGTGGTG AAATCATGAG AGAAGGAACT
    CCTAAACAAG ACACGTGTAC ACTACCAAGA CTGTCACAGA CTACAACAAT TATCTTCATT
    TTCGGCTTAT GTCTGATTGG ACTCAACTTG GTTTTGGCTT TGTGGTACCT TGGTTTGAAA
    AGATGCTTAC TTGCACTCAG CTACTTTGGT ATTGGAGTAT TGTTCTACTT CGCAACGGTT
    GCAGCTGCGG CCACTGGGGC TCTGTGTTTT GGTACATTAG GAGTGAATGT CCTCGCAGTA
    TCGATATTCA CGTTGGCACA AGCGTTTGTA GGAACATTGT TCGTGGGATT GGCATTGCAT
    TGCTATTACA CGGACTGCAA AGCGGATACG AACGAAGATA GCGCGACACG CAAGGCCGAA
    GATGATGCGG GATCAGCAGA TGCGCCATTA ATGAACAAGA AAGCGTCAGA CGAAACATCA
    ACAGAGGAGG AGAAGAAGGA CGAAGGAATA GGATTGGAGG TGGCGAGAGA CCATGGCTCT
    GTTTCTGTTT ATTCAATGTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kröger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS