Gene Symbol | CIITA |
Entrez Gene ID | 100919223 |
Full Name | class II major histocompatibility complex transactivator |
Gene Type | protein-coding |
Organism | Sarcophilus harrisii(Tasmanian devil) |
ORF » Species Summary » Sarcophilus harrisii » CIITA cDNA ORF clone
Gene Symbol | CIITA |
Entrez Gene ID | 100919223 |
Full Name | class II major histocompatibility complex transactivator |
Gene Type | protein-coding |
Organism | Sarcophilus harrisii(Tasmanian devil) |
mRNA | Protein | Name |
---|---|---|
XM_023497583.2 | XP_023353351.2 | MHC class II transactivator isoform X1 |
XM_023497584.1 | XP_023353352.1 | MHC class II transactivator isoform X2 |
XM_023497585.1 | XP_023353353.1 | MHC class II transactivator isoform X3 |
XM_003761709.2 | XP_003761757.1 | MHC class II transactivator |
XM_023497583.1 | XP_023353351.1 | MHC class II transactivator isoform X1 |
XM_023497584.2 | XP_023353352.1 | MHC class II transactivator isoform X2 |
The following CIITA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CIITA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSa123500 | |
Clone ID Related Accession (Same CDS sequence) | XM_003761709.2 | |
Accession Version | XM_003761709.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3336bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1431532800000 | |
Organism | Sarcophilus harrisii(Tasmanian devil) | |
Product | MHC class II transactivator | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003823539.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 15, 2015 this sequence version replaced XM_003761709.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sarcophilus harrisii Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 6% of CDS bases ##RefSeq-Attributes-END## |
1 | ATGGACCAGT TCAAGGCAAT CCTGCCCCAG GTGAGGGCTC TGCTATCCAA TGCTTGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_003761757.1 |
CDS | 1..3336 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGACCAGT TCAAGGCAAT CCTGCCCCAG GTGAGGGCTC TGCTATCCAA TGCTTGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSa159693 | |
Clone ID Related Accession (Same CDS sequence) | XM_023497583.1 | |
Accession Version | XM_023497583.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3567bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1515513600000 | |
Organism | Sarcophilus harrisii(Tasmanian devil) | |
Product | MHC class II transactivator isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003823539.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Sarcophilus harrisii Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACCAGT TCAAGGCAAT CCTGCCCCAG GTGAGGGCTC TGCTATCCAA TGCTTGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_023353351.1 |
CDS | 1..3567 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGACCAGT TCAAGGCAAT CCTGCCCCAG GTGAGGGCTC TGCTATCCAA TGCTTGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSa159694 | |
Clone ID Related Accession (Same CDS sequence) | XM_023497584.1 , XM_023497584.2 | |
Accession Version | XM_023497584.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3291bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1515513600000 | |
Organism | Sarcophilus harrisii(Tasmanian devil) | |
Product | MHC class II transactivator isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003823539.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Sarcophilus harrisii Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGCAGT TACGTGGTGC TGATCAGTGT GCAGCTATGG AATCTGGGCC ATTGACAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_023353352.1 |
CDS | 183..3473 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCGGCAGT TACGTGGTGC TGATCAGTGT GCAGCTATGG AATCTGGGCC ATTGACAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSa159694 | |
Clone ID Related Accession (Same CDS sequence) | XM_023497584.1 , XM_023497584.2 | |
Accession Version | XM_023497584.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3291bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1577635200000 | |
Organism | Sarcophilus harrisii(Tasmanian devil) | |
Product | MHC class II transactivator isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_045426.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 31, 2019 this sequence version replaced XM_023497584.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Sarcophilus harrisii Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGCAGT TACGTGGTGC TGATCAGTGT GCAGCTATGG AATCTGGGCC ATTGACAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_023353352.1 |
CDS | 191..3481 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCGGCAGT TACGTGGTGC TGATCAGTGT GCAGCTATGG AATCTGGGCC ATTGACAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSa159695 | |
Clone ID Related Accession (Same CDS sequence) | XM_023497585.1 | |
Accession Version | XM_023497585.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3261bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1515513600000 | |
Organism | Sarcophilus harrisii(Tasmanian devil) | |
Product | MHC class II transactivator isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003823539.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Sarcophilus harrisii Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACCAGT TCAAGGCAAT CCTGCCCCAG GTGAGGGCTC TGCTATCCAA TGCTTGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_023353353.1 |
CDS | 1..3261 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACCAGT TCAAGGCAAT CCTGCCCCAG GTGAGGGCTC TGCTATCCAA TGCTTGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSa220512 | |
Clone ID Related Accession (Same CDS sequence) | XM_023497583.2 | |
Accession Version | XM_023497583.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3573bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1577635200000 | |
Organism | Sarcophilus harrisii(Tasmanian devil) | |
Product | MHC class II transactivator isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_045426.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 31, 2019 this sequence version replaced XM_023497583.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Sarcophilus harrisii Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCATGG ACCAGTTCAA GGCAATCCTG CCCCAGGTGA GGGCTCTGCT ATCCAATGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_023353351.2 |
CDS | 76..3648 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGTCATGG ACCAGTTCAA GGCAATCCTG CCCCAGGTGA GGGCTCTGCT ATCCAATGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.