ORF » Species Summary » Populus trichocarpa » LOC7484701 cDNA ORF clone

LOC7484701 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7484701 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7484701 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa25368 XM_002317035.2
Latest version!		 Populus trichocarpa ribose 5-phosphate isomerase-related family protein (POPTR_0011s15900g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa439315 XM_002317035.3
Latest version!		 Populus trichocarpa probable ribose-5-phosphate isomerase 4, chloroplastic (LOC7484701), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa439316 XM_024580923.1
Latest version!		 Populus trichocarpa probable ribose-5-phosphate isomerase 4, chloroplastic (LOC7484701), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7484701 ( XM_002317035.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002317071.2 Populus trichocarpa ribose 5-phosphate isomerase-related family protein (POPTR_0011s15900g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa25368
    Clone ID Related Accession (Same CDS sequence) XM_002317035.2
    Accession Version XM_002317035.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 858bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product ribose 5-phosphate isomerase-related family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008477). On Dec 16, 2013 this sequence version replaced XM_002317035.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCATCAT TAGCAACATC AACACTCGCG TACTCTACTC CTGTTAGAAT CAAAACTAGT 
    TCAAAGCCAA GGTCAAGTTC AAGAACTTGC AAGAAAACAG TCCCTTTCCT TGTTACTAGA 
    GCAGACAGTT CTTCTCTTCT CCTCCATGCA GCTAAGCACA CTGTTGATAA ACACATACAA 
    AGTGGCATGG TTGTTGGTTT AGGGTCTGGA CAGGCTTCTG GTTTGGCTAT ACAGTATCTG 
    GGTCGGCTAC TCCGAACTGG GGCTTTAAAA GATATAGTTG GAGTACCCAT GTCTGTAACA 
    AGTGCAAGTG AAGCAGCAAA GGCTGGCATC CCATTGGACG TATACCAAGA TAGTTCTCAA 
    ATTGATTTTG CATTTGATGA TGCTGATATT ATAGAAGAAG AAACACTTGC TGCAATCATT 
    GGACGTCGGA AATCACAGAG CGACGAGTCC ATCATTCAAG AGAAGTCAAT ACTCAAAGCA 
    GCCAATAAGC TTGTATTCAT GATTACAGAA AACCAGTACG TGGGAGGTCT TGAAGGTTCT 
    ATTCCAGTTT TGGTTCAAGC TCTCAACTGG ATGGAAACTG CTGAAGAGAT TGATGACCTA 
    TTTTTAGGTG ATGCAGAGGT ATGGAGGAGA TCATCGATAG GACAAGCTGG TCCGACGGGG 
    GGCGATTACC CTTTCATTAC AAGAGAAGGT CACAACGTTC TTGATGTCAT CTTCACATCT 
    CCAGTACAAA GCCTTGCTGA AGTAGCTGAA AGTCTTGATA AAGTTGATGG CGTTGTTGAT 
    CATGGAGTTT TTTCCAAGTT CCCATGCACT GTTGTGATTG CTGCTGAAAG TGGAGGTCTG 
    AACATTGTTG ATAGATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002317071.2
    CDS42..899
    Translation

    Target ORF information:

    RefSeq Version XM_002317035.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa ribose 5-phosphate isomerase-related family protein (POPTR_0011s15900g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002317035.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCATCAT TAGCAACATC AACACTCGCG TACTCTACTC CTGTTAGAAT CAAAACTAGT 
    TCAAAGCCAA GGTCAAGTTC AAGAACTTGC AAGAAAACAG TCCCTTTCCT TGTTACTAGA 
    GCAGACAGTT CTTCTCTTCT CCTCCATGCA GCTAAGCACA CTGTTGATAA ACACATACAA 
    AGTGGCATGG TTGTTGGTTT AGGGTCTGGA CAGGCTTCTG GTTTGGCTAT ACAGTATCTG 
    GGTCGGCTAC TCCGAACTGG GGCTTTAAAA GATATAGTTG GAGTACCCAT GTCTGTAACA 
    AGTGCAAGTG AAGCAGCAAA GGCTGGCATC CCATTGGACG TATACCAAGA TAGTTCTCAA 
    ATTGATTTTG CATTTGATGA TGCTGATATT ATAGAAGAAG AAACACTTGC TGCAATCATT 
    GGACGTCGGA AATCACAGAG CGACGAGTCC ATCATTCAAG AGAAGTCAAT ACTCAAAGCA 
    GCCAATAAGC TTGTATTCAT GATTACAGAA AACCAGTACG TGGGAGGTCT TGAAGGTTCT 
    ATTCCAGTTT TGGTTCAAGC TCTCAACTGG ATGGAAACTG CTGAAGAGAT TGATGACCTA 
    TTTTTAGGTG ATGCAGAGGT ATGGAGGAGA TCATCGATAG GACAAGCTGG TCCGACGGGG 
    GGCGATTACC CTTTCATTAC AAGAGAAGGT CACAACGTTC TTGATGTCAT CTTCACATCT 
    CCAGTACAAA GCCTTGCTGA AGTAGCTGAA AGTCTTGATA AAGTTGATGG CGTTGTTGAT 
    CATGGAGTTT TTTCCAAGTT CCCATGCACT GTTGTGATTG CTGCTGAAAG TGGAGGTCTG 
    AACATTGTTG ATAGATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7484701 ( XM_002317035.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002317071.3 Populus trichocarpa probable ribose-5-phosphate isomerase 4, chloroplastic (LOC7484701), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa439315
    Clone ID Related Accession (Same CDS sequence) XM_002317035.3
    Accession Version XM_002317035.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 858bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product probable ribose-5-phosphate isomerase 4, chloroplastic isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037295.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002317035.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCATCAT TAGCAACATC AACACTCGTG TACTCTACTC CTGTTAGAAT CAAAACTAGT 
    TCAAAGCCAA GGTCAAGTTC AAGAACTTGC AAGAAAACAG TCCCTTTCCT TGTTACTAGA 
    GCAGACAGTT CTTCTCTTCT CCTCCATGCA GCTAAGCACA CTGTTGATAA ACACATACAA 
    AGTGGCATGG TTGTTGGTTT AGGGTCTGGA CAGGCTTCTG GTTTGGCTAT ACAGTATCTG 
    GGTCGGCTAC TCCGAACTGG GGCTTTAAAA GATATAGTTG GAGTACCCAT GTCTGTAACA 
    AGTGCAAGTG AAGCAGCAAA GGCTGGCATC CCATTGGACG TATACCAAGA TAGTTCTCAA 
    ATTGATTTTG CATTTGATGA TGCTGATATT ATAGAAGAAG AAACACTTGT TGCAATCATT 
    GGACGTCGGA AATCACAGAG CGACGAGTCC ATCATTCAAG AGAAGTCAAT ACTCAAAGCA 
    GCCAATAAGC TTGTATTCAT GATTACAGAA AACCAGTACG TGGGAGGTCT TGAAGGTTCT 
    ATTCCAGTTG TCGTTCAAGC TCTCAACTGG ATGGAAACTG CTGAAGAGAT TGATGACCTA 
    TTTTTAGGTG ATGCAGAGGT ATGGAGGAGA TCATCGATAG GACAAGCTGG TCCGACGGGG 
    GGCGATTACC CTTTCATTAC AAGAGAAGGT CACAACGTTC TTGATGTCAT CTTCACATCT 
    CCAGTACAAA GCCTTGCTGA AGTAGCTGAA AGTCTTGATA AAGTTGATGG CGTTGTTGAT 
    CATGGAGTTT TTTCCAAGTT CCCATGCACT GTTGTGATTG CTGCTGAAAG TGGAGGTCTG 
    AACATTGTTG ATAGATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002317071.3
    CDS86..943
    Translation

    Target ORF information:

    RefSeq Version XM_002317035.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa probable ribose-5-phosphate isomerase 4, chloroplastic (LOC7484701), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002317035.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCATCAT TAGCAACATC AACACTCGTG TACTCTACTC CTGTTAGAAT CAAAACTAGT 
    TCAAAGCCAA GGTCAAGTTC AAGAACTTGC AAGAAAACAG TCCCTTTCCT TGTTACTAGA 
    GCAGACAGTT CTTCTCTTCT CCTCCATGCA GCTAAGCACA CTGTTGATAA ACACATACAA 
    AGTGGCATGG TTGTTGGTTT AGGGTCTGGA CAGGCTTCTG GTTTGGCTAT ACAGTATCTG 
    GGTCGGCTAC TCCGAACTGG GGCTTTAAAA GATATAGTTG GAGTACCCAT GTCTGTAACA 
    AGTGCAAGTG AAGCAGCAAA GGCTGGCATC CCATTGGACG TATACCAAGA TAGTTCTCAA 
    ATTGATTTTG CATTTGATGA TGCTGATATT ATAGAAGAAG AAACACTTGT TGCAATCATT 
    GGACGTCGGA AATCACAGAG CGACGAGTCC ATCATTCAAG AGAAGTCAAT ACTCAAAGCA 
    GCCAATAAGC TTGTATTCAT GATTACAGAA AACCAGTACG TGGGAGGTCT TGAAGGTTCT 
    ATTCCAGTTG TCGTTCAAGC TCTCAACTGG ATGGAAACTG CTGAAGAGAT TGATGACCTA 
    TTTTTAGGTG ATGCAGAGGT ATGGAGGAGA TCATCGATAG GACAAGCTGG TCCGACGGGG 
    GGCGATTACC CTTTCATTAC AAGAGAAGGT CACAACGTTC TTGATGTCAT CTTCACATCT 
    CCAGTACAAA GCCTTGCTGA AGTAGCTGAA AGTCTTGATA AAGTTGATGG CGTTGTTGAT 
    CATGGAGTTT TTTCCAAGTT CCCATGCACT GTTGTGATTG CTGCTGAAAG TGGAGGTCTG 
    AACATTGTTG ATAGATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7484701 ( XM_024580923.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024436691.1 Populus trichocarpa probable ribose-5-phosphate isomerase 4, chloroplastic (LOC7484701), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa439316
    Clone ID Related Accession (Same CDS sequence) XM_024580923.1
    Accession Version XM_024580923.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 750bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product probable ribose-5-phosphate isomerase 4, chloroplastic isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037295.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGGCATCAT TAGCAACATC AACACTCGTG TACTCTACTC CTGTTAGAAT CAAAACTAGT 
    TCAAAGCCAA GGTCAAGTTC AAGAACTTGC AAGAAAACAG TCCCTTTCCT TGTTACTAGA 
    GCAGACAGTT CTTCTCTTCT CCTCCATGCA GCTAAGCACA CTGTTGATAA ACACATACAA 
    AGTGGCATGG TTGTTGGTTT AGGGTCTGGA CAGGCTTCTG GTTTGGCTAT ACAGTATCTG 
    GGTCGGCTAC TCCGAACTGG GGCTTTAAAA GATATAGTTG GAGTACCCAT GTCTGTAACA 
    AGTGCAAGTG AAGCAGCAAA GGCTGGCATC CCATTGGACG TATACCAAGA TAGTTCTCAA 
    ATTGATTTTG CATTTGATGA TGCTGATATT ATAGAAGAAG AAACACTTGT TGCAATCATT 
    GGACGTCGGA AATCACAGAG CGACGAGTCC ATCATTCAAG AGAAGTCAAT ACTCAAAGCA 
    GCCAATAAGC TTGTATTCAT GATTACAGAA AACCAGTACG TGGGAGGTCT TGAAGGTTCT 
    ATTCCAGTTG TCGTTCAAGC TCTCAACTGG ATGGAAACTG CTGAAGAGAT TGATGACCTA 
    TTTTTAGGTG ATGCAGAGGT ATGGAGGAGA TCATCGATAG GACAAGCTGG TCCGACGGGG 
    GGCGATTACC CTTTCATTAC AAGAGAAGGT CACAACGTTC TTGATGTCAT CTTCACATCT 
    CCAGTACAAA GCCTTGATGC ACTGTTGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024436691.1
    CDS86..835
    Translation

    Target ORF information:

    RefSeq Version XM_024580923.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa probable ribose-5-phosphate isomerase 4, chloroplastic (LOC7484701), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024580923.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGGCATCAT TAGCAACATC AACACTCGTG TACTCTACTC CTGTTAGAAT CAAAACTAGT 
    TCAAAGCCAA GGTCAAGTTC AAGAACTTGC AAGAAAACAG TCCCTTTCCT TGTTACTAGA 
    GCAGACAGTT CTTCTCTTCT CCTCCATGCA GCTAAGCACA CTGTTGATAA ACACATACAA 
    AGTGGCATGG TTGTTGGTTT AGGGTCTGGA CAGGCTTCTG GTTTGGCTAT ACAGTATCTG 
    GGTCGGCTAC TCCGAACTGG GGCTTTAAAA GATATAGTTG GAGTACCCAT GTCTGTAACA 
    AGTGCAAGTG AAGCAGCAAA GGCTGGCATC CCATTGGACG TATACCAAGA TAGTTCTCAA 
    ATTGATTTTG CATTTGATGA TGCTGATATT ATAGAAGAAG AAACACTTGT TGCAATCATT 
    GGACGTCGGA AATCACAGAG CGACGAGTCC ATCATTCAAG AGAAGTCAAT ACTCAAAGCA 
    GCCAATAAGC TTGTATTCAT GATTACAGAA AACCAGTACG TGGGAGGTCT TGAAGGTTCT 
    ATTCCAGTTG TCGTTCAAGC TCTCAACTGG ATGGAAACTG CTGAAGAGAT TGATGACCTA 
    TTTTTAGGTG ATGCAGAGGT ATGGAGGAGA TCATCGATAG GACAAGCTGG TCCGACGGGG 
    GGCGATTACC CTTTCATTAC AAGAGAAGGT CACAACGTTC TTGATGTCAT CTTCACATCT 
    CCAGTACAAA GCCTTGATGC ACTGTTGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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