ORF » Species Summary » Populus trichocarpa » POPTR_0001s26630g cDNA ORF clone

POPTR_0001s26630g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0001s26630g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0001s26630g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa01547 XM_002298369.3
Latest version!		 Populus trichocarpa aldehyde dehydrogenase family 3 member F1 (LOC7480051), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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OPa01547 XM_002298369.2 Populus trichocarpa hypothetical protein (POPTR_0001s26630g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0001s26630g ( XM_002298369.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002298405.2 Populus trichocarpa aldehyde dehydrogenase family 3 member F1 (LOC7480051), mRNA.
    Price & Availability↑
    CloneID OPa01547
    Clone ID Related Accession (Same CDS sequence) XM_002298369.3 , XM_002298369.2
    Accession Version XM_002298369.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1458bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product aldehyde dehydrogenase family 3 member F1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002298369.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGAGGGTG TGGAGGGTTT GGAGAGTGAT TTAGAGGGCA TGAGACAGTA TTTTAGGAGT 
    GGAAAGACCA AAGATGTAGC TTGGAGGCAA TCCCAGCTGA AAGGATTGCT CTCGTTTATT 
    AAGGAAACAG AGAGAGACAT GTGCAAGGCT TTAAAGGAAG ATTTAGGGAA GCATCATGTT 
    GAGGCATACA GAGACGAGGT AGGGATATTG ACAAAATCCA TCAATTTTGC ACTGCACGGA 
    TTAAAAGAAT GGATGTCAAG CAAGAAGGCC AAGTTGCCGA GAGTTGCCCT GTTATCATCT 
    GCAGAATTGG TACCTGAACC TCTTGGTTTT GTCCTAATTA TTTCATCATG GAATTTTCCT 
    TTTGGACTAT CCTTGGAACC AATGATAGGA GCAATAGCTG CAGGTAACAC GATGGTTTTA 
    AAACCTTCGG AATTAGCTCC TGCAAGTGCT TCTCTTCTAG CAAATGTTTT GCCAACTTAC 
    CTAGACAATT CAGCTGTCAA GGTTATCCAA GGAGGACCAG CTGTGGGTGA ACGTCTCCTA 
    CAGCAGAAAT GGGACAAGAT CTTTTTTACA GGAAGTGCAC GAGTAGGACG AATAATTATG 
    TCAGCAGCTG TGAAACATCT CACACCTGTT GCTCTAGAAT TGGGAGGTAA ATGCCCTGCT 
    GTTGTGGATT CTGTATCATC TTCATGGGAT ACAAAGGTGA CTGTGAACAG AATTTTAGTG 
    TCAAAATTTG GAGCCTGTGC TGGTCAAGCA TGTATAGCAA TTGATTATAT CCTAGTGGAA 
    AAAAGATTTG CTTCCATCTT GGTGGAATTA ATGAAAGTTA TGATCAAGAA AATGTTTGGT 
    GAAAACCCAA GAGAGACAAA TACTGTTGCA AGAATAGTCA ACGAACAACA TTTCTTGAGA 
    TTGAAGAATC TTCTAAGCGA CTCAGCCGTG CAAAATTCCA TTGTCTATGG AGGTTCAATG 
    GATGAAAAGA ATCTGTTCGT TGAGCCAACA ATCCTGGTAG ATCCTCCACT TGATGCAGCA 
    ATAATGACAG AAGAGATATT TGGTCCTTTG CTTCCCATAA TCACACTGGA CAAGGTTGAG 
    GACAGTATTG CTTTTATCAA CTCAAAGCCT AAGCCACTTG CAATTTATGC CTTCACCAAC 
    AATGAAAAAT TCAGGAGAAG AATGTTATCT GAAACATCGT CAGGAAGCTT GGTATTCAAC 
    GATGCAGTTA TTCAGTATGC AGCTGATGCC TTACCATTTG GAGGGATTGG AGAAAGTGGG 
    ATTGGCAAGT ATCATGGGAA ATTCTCATTC GACACGTTTA GCCACTACAA GGCAGTGACA 
    AGAAGAAGCT TCCTAACTGA TTTTTGGTTC AGATTTCCTC CATGGAATGA TTACAAGCTG 
    TTGCTTTTGG AAGCGACTTA CAATTATGAC TATCTTGGAA TGCTCCTGGT CATTCTTGGC 
    TTAAAGAGGC GAAGATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002298405.2
    CDS191..1648
    Translation

    Target ORF information:

    RefSeq Version XM_002298369.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa aldehyde dehydrogenase family 3 member F1 (LOC7480051), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002298369.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGAGGGTG TGGAGGGTTT GGAGAGTGAT TTAGAGGGCA TGAGACAGTA TTTTAGGAGT 
    GGAAAGACCA AAGATGTAGC TTGGAGGCAA TCCCAGCTGA AAGGATTGCT CTCGTTTATT 
    AAGGAAACAG AGAGAGACAT GTGCAAGGCT TTAAAGGAAG ATTTAGGGAA GCATCATGTT 
    GAGGCATACA GAGACGAGGT AGGGATATTG ACAAAATCCA TCAATTTTGC ACTGCACGGA 
    TTAAAAGAAT GGATGTCAAG CAAGAAGGCC AAGTTGCCGA GAGTTGCCCT GTTATCATCT 
    GCAGAATTGG TACCTGAACC TCTTGGTTTT GTCCTAATTA TTTCATCATG GAATTTTCCT 
    TTTGGACTAT CCTTGGAACC AATGATAGGA GCAATAGCTG CAGGTAACAC GATGGTTTTA 
    AAACCTTCGG AATTAGCTCC TGCAAGTGCT TCTCTTCTAG CAAATGTTTT GCCAACTTAC 
    CTAGACAATT CAGCTGTCAA GGTTATCCAA GGAGGACCAG CTGTGGGTGA ACGTCTCCTA 
    CAGCAGAAAT GGGACAAGAT CTTTTTTACA GGAAGTGCAC GAGTAGGACG AATAATTATG 
    TCAGCAGCTG TGAAACATCT CACACCTGTT GCTCTAGAAT TGGGAGGTAA ATGCCCTGCT 
    GTTGTGGATT CTGTATCATC TTCATGGGAT ACAAAGGTGA CTGTGAACAG AATTTTAGTG 
    TCAAAATTTG GAGCCTGTGC TGGTCAAGCA TGTATAGCAA TTGATTATAT CCTAGTGGAA 
    AAAAGATTTG CTTCCATCTT GGTGGAATTA ATGAAAGTTA TGATCAAGAA AATGTTTGGT 
    GAAAACCCAA GAGAGACAAA TACTGTTGCA AGAATAGTCA ACGAACAACA TTTCTTGAGA 
    TTGAAGAATC TTCTAAGCGA CTCAGCCGTG CAAAATTCCA TTGTCTATGG AGGTTCAATG 
    GATGAAAAGA ATCTGTTCGT TGAGCCAACA ATCCTGGTAG ATCCTCCACT TGATGCAGCA 
    ATAATGACAG AAGAGATATT TGGTCCTTTG CTTCCCATAA TCACACTGGA CAAGGTTGAG 
    GACAGTATTG CTTTTATCAA CTCAAAGCCT AAGCCACTTG CAATTTATGC CTTCACCAAC 
    AATGAAAAAT TCAGGAGAAG AATGTTATCT GAAACATCGT CAGGAAGCTT GGTATTCAAC 
    GATGCAGTTA TTCAGTATGC AGCTGATGCC TTACCATTTG GAGGGATTGG AGAAAGTGGG 
    ATTGGCAAGT ATCATGGGAA ATTCTCATTC GACACGTTTA GCCACTACAA GGCAGTGACA 
    AGAAGAAGCT TCCTAACTGA TTTTTGGTTC AGATTTCCTC CATGGAATGA TTACAAGCTG 
    TTGCTTTTGG AAGCGACTTA CAATTATGAC TATCTTGGAA TGCTCCTGGT CATTCTTGGC 
    TTAAAGAGGC GAAGATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0001s26630g ( XM_002298369.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002298405.2 Populus trichocarpa hypothetical protein (POPTR_0001s26630g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa01547
    Clone ID Related Accession (Same CDS sequence) XM_002298369.3 , XM_002298369.2
    Accession Version XM_002298369.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1458bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). On Dec 16, 2013 this sequence version replaced XM_002298369.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGAGGGTG TGGAGGGTTT GGAGAGTGAT TTAGAGGGCA TGAGACAGTA TTTTAGGAGT 
    GGAAAGACCA AAGATGTAGC TTGGAGGCAA TCCCAGCTGA AAGGATTGCT CTCGTTTATT 
    AAGGAAACAG AGAGAGACAT GTGCAAGGCT TTAAAGGAAG ATTTAGGGAA GCATCATGTT 
    GAGGCATACA GAGACGAGGT AGGGATATTG ACAAAATCCA TCAATTTTGC ACTGCACGGA 
    TTAAAAGAAT GGATGTCAAG CAAGAAGGCC AAGTTGCCGA GAGTTGCCCT GTTATCATCT 
    GCAGAATTGG TACCTGAACC TCTTGGTTTT GTCCTAATTA TTTCATCATG GAATTTTCCT 
    TTTGGACTAT CCTTGGAACC AATGATAGGA GCAATAGCTG CAGGTAACAC GATGGTTTTA 
    AAACCTTCGG AATTAGCTCC TGCAAGTGCT TCTCTTCTAG CAAATGTTTT GCCAACTTAC 
    CTAGACAATT CAGCTGTCAA GGTTATCCAA GGAGGACCAG CTGTGGGTGA ACGTCTCCTA 
    CAGCAGAAAT GGGACAAGAT CTTTTTTACA GGAAGTGCAC GAGTAGGACG AATAATTATG 
    TCAGCAGCTG TGAAACATCT CACACCTGTT GCTCTAGAAT TGGGAGGTAA ATGCCCTGCT 
    GTTGTGGATT CTGTATCATC TTCATGGGAT ACAAAGGTGA CTGTGAACAG AATTTTAGTG 
    TCAAAATTTG GAGCCTGTGC TGGTCAAGCA TGTATAGCAA TTGATTATAT CCTAGTGGAA 
    AAAAGATTTG CTTCCATCTT GGTGGAATTA ATGAAAGTTA TGATCAAGAA AATGTTTGGT 
    GAAAACCCAA GAGAGACAAA TACTGTTGCA AGAATAGTCA ACGAACAACA TTTCTTGAGA 
    TTGAAGAATC TTCTAAGCGA CTCAGCCGTG CAAAATTCCA TTGTCTATGG AGGTTCAATG 
    GATGAAAAGA ATCTGTTCGT TGAGCCAACA ATCCTGGTAG ATCCTCCACT TGATGCAGCA 
    ATAATGACAG AAGAGATATT TGGTCCTTTG CTTCCCATAA TCACACTGGA CAAGGTTGAG 
    GACAGTATTG CTTTTATCAA CTCAAAGCCT AAGCCACTTG CAATTTATGC CTTCACCAAC 
    AATGAAAAAT TCAGGAGAAG AATGTTATCT GAAACATCGT CAGGAAGCTT GGTATTCAAC 
    GATGCAGTTA TTCAGTATGC AGCTGATGCC TTACCATTTG GAGGGATTGG AGAAAGTGGG 
    ATTGGCAAGT ATCATGGGAA ATTCTCATTC GACACGTTTA GCCACTACAA GGCAGTGACA 
    AGAAGAAGCT TCCTAACTGA TTTTTGGTTC AGATTTCCTC CATGGAATGA TTACAAGCTG 
    TTGCTTTTGG AAGCGACTTA CAATTATGAC TATCTTGGAA TGCTCCTGGT CATTCTTGGC 
    TTAAAGAGGC GAAGATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002298405.2
    CDS116..1573
    Translation

    Target ORF information:

    RefSeq Version XM_002298369.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0001s26630g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002298369.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGAGGGTG TGGAGGGTTT GGAGAGTGAT TTAGAGGGCA TGAGACAGTA TTTTAGGAGT 
    GGAAAGACCA AAGATGTAGC TTGGAGGCAA TCCCAGCTGA AAGGATTGCT CTCGTTTATT 
    AAGGAAACAG AGAGAGACAT GTGCAAGGCT TTAAAGGAAG ATTTAGGGAA GCATCATGTT 
    GAGGCATACA GAGACGAGGT AGGGATATTG ACAAAATCCA TCAATTTTGC ACTGCACGGA 
    TTAAAAGAAT GGATGTCAAG CAAGAAGGCC AAGTTGCCGA GAGTTGCCCT GTTATCATCT 
    GCAGAATTGG TACCTGAACC TCTTGGTTTT GTCCTAATTA TTTCATCATG GAATTTTCCT 
    TTTGGACTAT CCTTGGAACC AATGATAGGA GCAATAGCTG CAGGTAACAC GATGGTTTTA 
    AAACCTTCGG AATTAGCTCC TGCAAGTGCT TCTCTTCTAG CAAATGTTTT GCCAACTTAC 
    CTAGACAATT CAGCTGTCAA GGTTATCCAA GGAGGACCAG CTGTGGGTGA ACGTCTCCTA 
    CAGCAGAAAT GGGACAAGAT CTTTTTTACA GGAAGTGCAC GAGTAGGACG AATAATTATG 
    TCAGCAGCTG TGAAACATCT CACACCTGTT GCTCTAGAAT TGGGAGGTAA ATGCCCTGCT 
    GTTGTGGATT CTGTATCATC TTCATGGGAT ACAAAGGTGA CTGTGAACAG AATTTTAGTG 
    TCAAAATTTG GAGCCTGTGC TGGTCAAGCA TGTATAGCAA TTGATTATAT CCTAGTGGAA 
    AAAAGATTTG CTTCCATCTT GGTGGAATTA ATGAAAGTTA TGATCAAGAA AATGTTTGGT 
    GAAAACCCAA GAGAGACAAA TACTGTTGCA AGAATAGTCA ACGAACAACA TTTCTTGAGA 
    TTGAAGAATC TTCTAAGCGA CTCAGCCGTG CAAAATTCCA TTGTCTATGG AGGTTCAATG 
    GATGAAAAGA ATCTGTTCGT TGAGCCAACA ATCCTGGTAG ATCCTCCACT TGATGCAGCA 
    ATAATGACAG AAGAGATATT TGGTCCTTTG CTTCCCATAA TCACACTGGA CAAGGTTGAG 
    GACAGTATTG CTTTTATCAA CTCAAAGCCT AAGCCACTTG CAATTTATGC CTTCACCAAC 
    AATGAAAAAT TCAGGAGAAG AATGTTATCT GAAACATCGT CAGGAAGCTT GGTATTCAAC 
    GATGCAGTTA TTCAGTATGC AGCTGATGCC TTACCATTTG GAGGGATTGG AGAAAGTGGG 
    ATTGGCAAGT ATCATGGGAA ATTCTCATTC GACACGTTTA GCCACTACAA GGCAGTGACA 
    AGAAGAAGCT TCCTAACTGA TTTTTGGTTC AGATTTCCTC CATGGAATGA TTACAAGCTG 
    TTGCTTTTGG AAGCGACTTA CAATTATGAC TATCTTGGAA TGCTCCTGGT CATTCTTGGC 
    TTAAAGAGGC GAAGATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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